Literature DB >> 29294259

Aqueous ionic liquids influence the disulfide bond isoform equilibrium in conotoxin AuIB: a consequence of the Hofmeister effect?

Karuna Anna Sajeevan1, Durba Roy2.   

Abstract

The appearance of several disulfide bond isoforms in multiple cysteine containing venom peptides poses a significant challenge in their synthesis and purification under laboratory conditions. Recent experiments suggest that careful tuning of solvent and temperature conditions can propel the disulfide bond isoform equilibrium in favor of the most potent, native form. Certain aqueous ionic liquids (ILs) have proven significantly useful as solvents for this purpose, while exceptions have also been noted. To elucidate the molecular level origin behind such a preference, we report a detailed explicit solvent replica exchange molecular dynamics study of a conotoxin, AuIB, in pure water and four different aqueous IL solutions (~45-60% v/v). The ILs studied here are comprised of cations like 1-ethyl-3-methyl-imidazolium (Im21+) or 1-butyl-3-methyl-imidazolium (Im41+) coupled with either acetate (OAc-) or chloride (Cl-) as the counter anion. Our simulations unfold interesting features of the conformational spaces sampled by the peptide and its solvation in pure water and aqueous IL solutions. Detailed investigation into populations of the globular disulfide bond isoform of AuIB in aqueous IL solutions reveal distinct trends which might be related to the Hofmeister effect of the cation and anion of the IL and of specific interactions of the aqueous IL solutions with the peptide. In accordance with experimental observations, the aqueous [Im21][OAc] solution is found to promote the highest globular isoform population in AuIB.

Entities:  

Keywords:  Conopeptide; Disulfide scrambling; Hofmeister effect; Ionic liquid; REMD

Year:  2018        PMID: 29294259      PMCID: PMC5988620          DOI: 10.1007/s12551-017-0391-2

Source DB:  PubMed          Journal:  Biophys Rev        ISSN: 1867-2450


  56 in total

1.  ConoServer, a database for conopeptide sequences and structures.

Authors:  Quentin Kaas; Jan-C Westermann; Reena Halai; Conan K L Wang; David J Craik
Journal:  Bioinformatics       Date:  2007-12-06       Impact factor: 6.937

2.  Identifying key amino acid residues that affect α-conotoxin AuIB inhibition of α3β4 nicotinic acetylcholine receptors.

Authors:  Anton A Grishin; Hartmut Cuny; Andrew Hung; Richard J Clark; Andreas Brust; Kalyana Akondi; Paul F Alewood; David J Craik; David J Adams
Journal:  J Biol Chem       Date:  2013-10-07       Impact factor: 5.157

3.  Conopeptide characterization and classifications: an analysis using ConoServer.

Authors:  Quentin Kaas; Jan-Christoph Westermann; David J Craik
Journal:  Toxicon       Date:  2010-03-06       Impact factor: 3.033

Review 4.  Biomolecular electrostatics and solvation: a computational perspective.

Authors:  Pengyu Ren; Jaehun Chun; Dennis G Thomas; Michael J Schnieders; Marcelo Marucho; Jiajing Zhang; Nathan A Baker
Journal:  Q Rev Biophys       Date:  2012-11       Impact factor: 5.318

5.  reaxFF Reactive Force Field for Disulfide Mechanochemistry, Fitted to Multireference ab Initio Data.

Authors:  Julian Müller; Bernd Hartke
Journal:  J Chem Theory Comput       Date:  2016-07-26       Impact factor: 6.006

6.  A new force field model for the simulation of transport properties of imidazolium-based ionic liquids.

Authors:  Vitaly V Chaban; Iuliia V Voroshylova; Oleg N Kalugin
Journal:  Phys Chem Chem Phys       Date:  2011-03-28       Impact factor: 3.676

7.  Specific ion effects on the water solubility of macromolecules: PNIPAM and the Hofmeister series.

Authors:  Yanjie Zhang; Steven Furyk; David E Bergbreiter; Paul S Cremer
Journal:  J Am Chem Soc       Date:  2005-10-19       Impact factor: 15.419

8.  On the different roles of anions and cations in the solvation of enzymes in ionic liquids.

Authors:  Marco Klähn; Geraldine S Lim; Abirami Seduraman; Ping Wu
Journal:  Phys Chem Chem Phys       Date:  2010-12-06       Impact factor: 3.676

9.  Solving the alpha-conotoxin folding problem: efficient selenium-directed on-resin generation of more potent and stable nicotinic acetylcholine receptor antagonists.

Authors:  Markus Muttenthaler; Simon T Nevin; Anton A Grishin; Shyuan T Ngo; Peng T Choy; Norelle L Daly; Shu-Hong Hu; Christopher J Armishaw; Ching-I A Wang; Richard J Lewis; Jennifer L Martin; Peter G Noakes; David J Craik; David J Adams; Paul F Alewood
Journal:  J Am Chem Soc       Date:  2010-03-17       Impact factor: 15.419

Review 10.  Proteins in Ionic Liquids: Current Status of Experiments and Simulations.

Authors:  Christian Schröder
Journal:  Top Curr Chem (Cham)       Date:  2017-02-07
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