Literature DB >> 29291763

Proteomics and Metabolomics for AKI Diagnosis.

David Marx1, Jochen Metzger2, Martin Pejchinovski3, Ryan Bruce Gil4, Maria Frantzi3, Agnieszka Latosinska3, Iwona Belczacka3, Silke Sophie Heinzmann4, Holger Husi5, Jerome Zoidakis6, Matthias Klingele7, Stefan Herget-Rosenthal8.   

Abstract

Acute kidney injury (AKI) is a severe and frequent condition in hospitalized patients. Currently, no efficient therapy of AKI is available. Therefore, efforts focus on early prevention and potentially early initiation of renal replacement therapy to improve the outcome in AKI. The detection of AKI in hospitalized patients implies the need for early, accurate, robust, and easily accessible biomarkers of AKI evolution and outcome prediction because only a narrow window exists to implement the earlier-described measures. Even more challenging is the multifactorial origin of AKI and the fact that the changes of molecular expression induced by AKI are difficult to distinguish from those of the diseases associated or causing AKI as shock or sepsis. During the past decade, a considerable number of protein biomarkers for AKI have been described and we expect from recent advances in the field of omics technologies that this number will increase further in the future and be extended to other sorts of biomolecules, such as RNAs, lipids, and metabolites. However, most of these biomarkers are poorly defined by their AKI-associated molecular context. In this review, we describe the state-of-the-art tissue and biofluid proteomic and metabolomic technologies and new bioinformatics approaches for proteomic and metabolomic pathway and molecular interaction analysis. In the second part of the review, we focus on AKI-associated proteomic and metabolomic biomarkers and briefly outline their pathophysiological context in AKI.
Copyright © 2017 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  AKI diagnosis; Proteomics; metabolomics; pathway analysis

Mesh:

Substances:

Year:  2018        PMID: 29291763     DOI: 10.1016/j.semnephrol.2017.09.007

Source DB:  PubMed          Journal:  Semin Nephrol        ISSN: 0270-9295            Impact factor:   5.299


  22 in total

Review 1.  Recent advances in acute kidney injury and its consequences and impact on chronic kidney disease.

Authors:  Anna Zuk; Joseph V Bonventre
Journal:  Curr Opin Nephrol Hypertens       Date:  2019-07       Impact factor: 2.894

Review 2.  Proteomic profiling of urine: implications for lupus nephritis.

Authors:  Najla Aljaberi; Michael Bennett; Hermine I Brunner; Prasad Devarajan
Journal:  Expert Rev Proteomics       Date:  2019-03-18       Impact factor: 3.940

3.  Multi-omic approaches to acute kidney injury and repair.

Authors:  Louisa M S Gerhardt; Andrew P McMahon
Journal:  Curr Opin Biomed Eng       Date:  2021-09-21

4.  Choline supplementation attenuates experimental sepsis-associated acute kidney injury.

Authors:  Denise C Hasson; Miki Watanabe-Chailland; Lindsey Romick-Rosendale; Adeleine Koterba; Dashiell S Miner; Patrick Lahni; Qing Ma; Stuart L Goldstein; Prasad Devarajan; Stephen W Standage
Journal:  Am J Physiol Renal Physiol       Date:  2022-07-14

Review 5.  Multi-Omics Techniques Make it Possible to Analyze Sepsis-Associated Acute Kidney Injury Comprehensively.

Authors:  Jiao Qiao; Liyan Cui
Journal:  Front Immunol       Date:  2022-07-07       Impact factor: 8.786

6.  Metabolomic profiling demonstrates evidence for kidney and urine metabolic dysregulation in a piglet model of cardiac surgery-induced acute kidney injury.

Authors:  Jesse A Davidson; Justin Robison; Ludmila Khailova; Benjamin S Frank; James Jaggers; Richard J Ing; Scott Lawson; John Iguidbashian; Eiman Ali; Amy Treece; Danielle E Soranno; Suzanne Osorio-Lujan; Jelena Klawitter
Journal:  Am J Physiol Renal Physiol       Date:  2022-05-09

7.  Urinary metabolomics to develop predictors for pediatric acute kidney injury.

Authors:  Alexandra Franiek; Atul Sharma; Vedran Cockovski; David S Wishart; Michael Zappitelli; Tom D Blydt-Hansen
Journal:  Pediatr Nephrol       Date:  2022-01-10       Impact factor: 3.651

8.  Serum metabolic profile of postoperative acute kidney injury following infant cardiac surgery with cardiopulmonary bypass.

Authors:  Jesse A Davidson; Benjamin S Frank; Tracy T Urban; Mark Twite; James Jaggers; Ludmila Khailova; Jelena Klawitter
Journal:  Pediatr Nephrol       Date:  2021-05-05       Impact factor: 3.651

Review 9.  The application of omic technologies to research in sepsis-associated acute kidney injury.

Authors:  Denise Hasson; Stuart L Goldstein; Stephen W Standage
Journal:  Pediatr Nephrol       Date:  2020-04-30       Impact factor: 3.714

10.  Non-invasive continuous renal tissue oxygenation monitoring to identify preterm neonates at risk for acute kidney injury.

Authors:  Matthew W Harer; Claudette O Adegboro; Luke J Richard; Ryan M McAdams
Journal:  Pediatr Nephrol       Date:  2021-01-03       Impact factor: 3.714

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