| Literature DB >> 29283399 |
Betül Kaya Çavuşoğlu1, Begüm Nurpelin Sağlık2,3, Derya Osmaniye4,5, Serkan Levent6,7, Ulviye Acar Çevik8,9, Abdullah Burak Karaduman10, Yusuf Özkay11,12, Zafer Asım Kaplancıklı13,14.
Abstract
Twenty-six novel thiosemicarbazone derivative B1-B26 were synthesized via condensation reactions between the correspondingEntities:
Keywords: ADME; MAO-A; MAO-B; MTT; docking; enzyme kinetic study; thiosemicarbazone
Mesh:
Substances:
Year: 2017 PMID: 29283399 PMCID: PMC6017703 DOI: 10.3390/molecules23010060
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.411
Scheme 1The synthetic route of the compounds B1–B26. Reagents and conditions: (i) ethanol, ice bath, 2 h; (ii) N,N-dimethylformamide (DMF), K2CO3, reflux, 24 h; (iii) ethanol, reflux, 4–10 h.
Initial screening results to determine inhibition potency of compounds B1–B26, moclobemide and selegiline against monoamine oxidase A (MAO-A) and monoamine oxidase B (MAO-B) at concentrations of 10−3 M and 10−4 M.
| Compound | MAO-A Inhibition % | MAO-B Inhibition % | ||
|---|---|---|---|---|
| 10−3 M | 10−4 M | 10−3 M | 10−4 M | |
| 21.08 ± 0.34 | 13.77 ± 0.29 | 15.80 ± 0.30 | 10.21 ± 0.14 | |
| 30.68 ± 0.85 | 16.28 ± 0.97 | 27.08 ± 0.46 | 18.83 ± 0.37 | |
| 20.77 ± 0.55 | 15.51 ± 0.50 | 17.85 ± 0.28 | 11.41 ± 0.33 | |
| 30.85 ± 1.07 | 26.77 ± 0.79 | 20.32 ± 0.67 | 16.10 ± 0.62 | |
| 32.61 ± 1.03 | 16.63 ± 0.51 | 29.88 ± 0.88 | 14.43 ± 0.41 | |
| 26.98 ± 0.77 | 11.79 ± 0.28 | 22.58 ± 0.62 | 16.77 ± 0.44 | |
| 30.10 ± 1.20 | 24.08 ± 0.81 | 23.45 ± 0.16 | 18.79 ± 0.27 | |
| 34.83 ± 0.79 | 19.76 ± 0.71 | 25.17 ± 0.82 | 20.25 ± 0.80 | |
| 24.56 ± 0.89 | 18.80 ± 0.62 | 18.62 ± 0.40 | 14.11 ± 0.36 | |
| 40.79 ± 1.23 | 32.88 ± 0.77 | 20.43 ± 0.58 | 16.02 ± 0.69 | |
| 35.90 ± 0.22 | 30.01 ± 0.45 | 31.34 ± 0.74 | 27.85 ± 0.61 | |
| 32.06 ± 0.68 | 26.33 ± 0.57 | 29.66 ± 1.02 | 16.88 ± 0.47 | |
| 36.65 ± 1.13 | 27.19 ± 0.84 | 27.49 ± 0.66 | 20.66 ± 0.73 | |
| 41.08 ± 1.26 | 27.09 ± 0.67 | 23.47 ± 0.48 | 18.65 ± 0.33 | |
| 39.48 ± 1.05 | 20.06 ± 0.97 | 22.17 ± 0.88 | 14.20 ± 0.41 | |
| 37.96 ± 1.00 | 29.88 ± 0.98 | 24.63 ± 0.48 | 21.74 ± 0.36 | |
| 48.83 ± 1.02 | 39.77 ± 1.26 | 30.75 ± 0.78 | 17.49 ± 0.77 | |
| 39.40 ± 0.62 | 31.28 ± 0.57 | 26.79 ± 0.49 | 22.62 ± 0.40 | |
| 53.56 ± 1.08 | 40.57 ± 1.12 | 32.06 ± 0.81 | 27.05 ± 0.69 | |
| 41.33 ± 0.39 | 35.66 ± 0.27 | 28.20 ± 0.66 | 21.63 ± 0.50 | |
| 58.52 ± 1.36 | 35.75 ± 0.91 | 37.03 ± 0.40 | 30.49 ± 0.38 | |
| 50.88 ± 1.09 | 38.29 ± 0.97 | 27.88 ± 0.45 | 20.22 ± 0.41 | |
| 64.85 ± 1.04 | 46.10 ± 0.77 | 24.55 ± 0.68 | 19.62 ± 0.44 | |
| 83.31 ± 1.08 | 70.07 ± 1.12 | 14.43 ± 0.26 | 11.79 ± 0.30 | |
| 57.14 ± 1.17 | 32.38 ± 0.68 | 30.40 ± 0.60 | 24.61 ± 0.43 | |
| 51.33 ± 0.38 | 36.09 ± 0.22 | 27.99 ± 0.19 | 19.89 ± 0.11 | |
| 91.42 ± 4.60 | 77.86 ± 3.71 | - | - | |
| - | - | 97.69 ± 4.16 | 94.42 ± 3.89 | |
Figure 1Further screening to determine inhibition potency and a half-maximal inhibitory concentration (IC50) values of B24 and moclobemide against MAO-A.
Figure 2(A) Lineweaver–Burk plots for the inhibition of MAO-A by compound B24. [S], substrate concentration (μM); V, reaction velocity (nmol/min/mg protein). Inhibitor concentrations are shown at the left. Michaelis-Menten constant (Km) values from IC50/2 to control; 3.303, 6.455, 10.656 and 0.933 (μM). Vmax value of the competitive inhibition; 111.015 ± 2.557 (nmol/min/mg protein); (B) Secondary plot for calculation of steady-state inhibition constant (Ki) of compound B24. Ki was calculated as 0.142 μM.
Figure 3The interacting mode of compound B24 in the active region of MAO-A. The inhibitor and the important residues in the active site of the enzyme are presented by tube model. The flavin adenine dinucleotide (FAD) molecule is colored green with ball and stick model. After superposing X-ray ligands Root Mean Square Deviation (RMSD) value is 0.029 Å. Docking score, glide gscore and glide emodel for compound B24 were found as: −11.869, −11.869 and −96.645, respectively.
Calculated Absorption, Distribution, Metabolism, and Excretion (ADME) parameters of compounds B1–B26.
| Compound | MW | DHB | AHB | PSA | logP | logS | PCaco | PM | PMDCK | logBB | CNS | VRF | VRT |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 338.470 | 2 | 5 | 49.573 | 4.334 | −6.156 | 2663.609 | 2 | 2461.245 | −0.222 | 0 | 0 | 1 | |
| 352.496 | 2 | 5 | 49.147 | 4.574 | −6.362 | 2679.674 | 2 | 2477.294 | −0.212 | 0 | 0 | 1 | |
| 352.496 | 2 | 5 | 49.575 | 4.660 | −6.598 | 2663.218 | 2 | 2460.854 | −0.231 | 0 | 0 | 1 | |
| 415.555 | 2 | 6 | 55.441 | 5.471 | −7.686 | 2584.097 | 2 | 2381.928 | −0.281 | 0 | 1 | 1 | |
| 445.581 | 2 | 6.75 | 63.922 | 5.519 | −7.822 | 2584.100 | 3 | 2381.931 | −0.352 | 0 | 1 | 1 | |
| 361.461 | 2 | 4.5 | 52.430 | 4.937 | −6.253 | 2720.949 | 3 | 2518.564 | −0.333 | 0 | 0 | 1 | |
| 377.521 | 2 | 4 | 44.334 | 5.540 | −7.067 | 2720.949 | 3 | 4269.676 | −0.249 | 0 | 1 | 1 | |
| 377.460 | 2 | 5.25 | 60.912 | 4.696 | −5.858 | 2720.951 | 3 | 2518.566 | −0.388 | 0 | 0 | 1 | |
| 393.521 | 2 | 4.75 | 52.815 | 5.296 | −6.666 | 2720.951 | 3 | 4269.729 | −0.304 | 0 | 1 | 1 | |
| 381.879 | 2 | 4.5 | 52.431 | 5.129 | −6.434 | 2720.949 | 2 | 6213.625 | −0.154 | 0 | 1 | 1 | |
| 397.939 | 2 | 4 | 44.334 | 5.730 | −7.247 | 2720.949 | 2 | 10,000 | −0.070 | 0 | 1 | 1 | |
| 365.424 | 2 | 4.5 | 52.431 | 4.873 | −6.063 | 2720.949 | 2 | 4554.137 | −0.207 | 0 | 0 | 1 | |
| 381.485 | 2 | 4 | 44.334 | 5.473 | -6.872 | 2720.949 | 2 | 7721.149 | −0.123 | 0 | 1 | 1 | |
| 344.517 | 2 | 5 | 47.948 | 4.598 | −6.731 | 3310.935 | 0 | 3266.539 | −0.115 | 0 | 0 | 1 | |
| 358.544 | 2 | 5 | 47.521 | 4.838 | −6.938 | 3331.393 | 0 | 3288.360 | −0.106 | 0 | 0 | 1 | |
| 358.544 | 2 | 5 | 47.989 | 4.898 | −7.145 | 3204.223 | 0 | 3153.046 | −0.138 | 0 | 0 | 1 | |
| 421.602 | 2 | 6 | 54.099 | 5.652 | −8.096 | 2974.126 | 0 | 2908.896 | −0.199 | 0 | 1 | 1 | |
| 451.629 | 2 | 6.75 | 62.782 | 5.827 | −8.356 | 3504.952 | 1 | 3665.702 | −0.174 | 0 | 1 | 1 | |
| 367.508 | 2 | 4.5 | 50.803 | 5.204 | −6.835 | 3382.919 | 1 | 3343.532 | −0.226 | 0 | 1 | 1 | |
| 383.569 | 2 | 4 | 42.707 | 5.810 | −7.656 | 3382.919 | 1 | 5668.228 | −0.139 | 0 | 1 | 1 | |
| 383.507 | 2 | 5.25 | 59.285 | 4.959 | −6.433 | 3382.922 | 1 | 3343.534 | −0.282 | 0 | 0 | 1 | |
| 399.568 | 2 | 4.75 | 51.188 | 5.562 | −7.249 | 3382.922 | 1 | 5668.299 | −0.194 | 0 | 1 | 1 | |
| 387.926 | 2 | 4.5 | 50.804 | 5.395 | −7.015 | 3382.919 | 0 | 8248.927 | −0.048 | 0 | 1 | 1 | |
| 403.987 | 2 | 4 | 42.707 | 6 | −7.835 | 3382.919 | 0 | 10,000 | -0.040 | 1 | 1 | 1 | |
| 371.472 | 2 | 4.5 | 50.804 | 5.138 | −6.642 | 3382.919 | 0 | 6045.866 | −0.102 | 0 | 1 | 1 | |
| 387.532 | 2 | 4 | 42.707 | 5.741 | −7.459 | 3382.919 | 0 | 10,000 | −0.015 | 0 | 1 | 1 |
MW: Molecular weight; DHB: Estimated number of hydrogen bond donors; AHB: Estimated number of hydrogen bond acceptors; PSA: Van der Waals surface area of polar nitrogen and oxygen atoms and carbonyl carbon atoms; logP: Predicted octanol/water partition coefficient; logS: Predicted aqueous solubility; PCaco: Predicted apparent Caco-2 cell permeability; PM: Number of likely metabolic reactions; PMDCK: Predicted apparent Madin-Darby canine kidney (MDCK) cell permeability; logBB: Predicted brain/blood partition coefficient; CNS: Predicted central nervous system activity on a −2 (inactive) to +2 (active) scale (recommended value: −2 (inactive), +2 (active));VRF: Number of violations of Lipinski’s rule of five. The rules are: MW < 500, logP < 5, DHB ≤ 5, AHB ≤ 10, Positive PSA value; VRT: Number of violations of Jorgensen’s rule of three. The three rules are: logS > −5.7, PCaco > 22 nm/s, PM < 7.
| Compound | A | X | Secondary Amine | R | Compound | A | X | Secondary Amine | R |
|---|---|---|---|---|---|---|---|---|---|
| phenyl | - | piperidine | - | cyclohexyl | - | piperidine | - | ||
| phenyl | - | 2-metilpiperidine | - | cyclohexyl | - | 2-metilpiperidine | - | ||
| phenyl | - | 4-metilpiperidine | - | cyclohexyl | - | 4-metilpiperidine | - | ||
| phenyl | - | 4-phenylpiperazine | - | cyclohexyl | - | 4-phenylpiperazine | - | ||
| phenyl | - | (4-methoxyphenyl)piperazine | - | cyclohexyl | - | (4-methoxyphenyl)piperazine | - | ||
| phenyl | O | - | CH3 | cyclohexyl | O | - | CH3 | ||
| phenyl | S | - | CH3 | cyclohexyl | S | - | CH3 | ||
| phenyl | O | - | OCH3 | cyclohexyl | O | - | OCH3 | ||
| phenyl | S | - | OCH3 | cyclohexyl | S | - | OCH3 | ||
| phenyl | O | - | Cl | cyclohexyl | O | - | Cl | ||
| phenyl | S | - | Cl | cyclohexyl | S | - | >Cl | ||
| phenyl | O | - | F | cyclohexyl | O | - | F | ||
| phenyl | S | - | F | cyclohexyl | S | - | F |