Literature DB >> 29277714

Loop-mediated isothermal amplification assay for the rapid and visual detection of novel porcine circovirus 3.

Yu-Ri Park1, Hye-Ryung Kim2, Seong-Hee Kim3, Kyoung-Ki Lee4, Young S Lyoo5, Sang-Geon Yeo6, Choi-Kyu Park7.   

Abstract

A loop-mediated isothermal amplification (LAMP) assay using hydroxynaphthol blue was developed for the rapid and visual detection of the capsid gene of porcine circovirus 3 (PCV3). The amplification could be completed in 40 min at 62°C, and the results could be visually detected by the naked eye. The assay specifically amplified PCV3 DNA and not other porcine viral nucleic acids. The limit of detection of the assay was 50 PCV3 DNA copies, which was comparable to that of the real-time polymerase chain reaction (qPCR) and lower than that of conventional PCR. In the clinical evaluation, the PCV3 detection rate of the LAMP assay was higher than that of PCR and agreed 100% with that of qPCR. These results indicate that the LAMP assay will be a valuable tool for the rapid, sensitive, and specific detection of PCV3 in clinical samples.
Copyright © 2017 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Capsid gene; Hydroxynaphthol blue; Loop-mediated isothermal amplification; Porcine circovirus 3

Mesh:

Substances:

Year:  2017        PMID: 29277714     DOI: 10.1016/j.jviromet.2017.12.006

Source DB:  PubMed          Journal:  J Virol Methods        ISSN: 0166-0934            Impact factor:   2.014


  3 in total

1.  Development of a reverse transcription-loop-mediated isothermal amplification (RT-LAMP) assay for the detection of porcine pegivirus.

Authors:  Hao Li; Kai Li; Zhen Bi; Jun Gu; Deping Song; Dan Lei; Suoxian Luo; Dongyan Huang; Qiong Wu; Zhen Ding; Leyi Wang; Yu Ye; Yuxin Tang
Journal:  J Virol Methods       Date:  2019-04-22       Impact factor: 2.014

2.  Loop-mediated isothermal amplification-lateral-flow dipstick (LAMP-LFD) to detect Mycoplasma ovipneumoniae.

Authors:  Jie Zhang; Junjun Cao; Mingsong Zhu; Mingguo Xu; Feng Shi
Journal:  World J Microbiol Biotechnol       Date:  2019-01-30       Impact factor: 3.312

3.  Novel polymerase spiral reaction assay for the visible molecular detection of porcine circovirus type 3.

Authors:  Jun Ji; Xin Xu; Xueyu Wang; Kejing Zuo; Zhili Li; Chaoliang Leng; Yunchao Kan; Lunguang Yao; Yingzuo Bi
Journal:  BMC Vet Res       Date:  2019-09-06       Impact factor: 2.741

  3 in total

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