Literature DB >> 29276780

The role of epigenomics in personalized medicine.

Mohamad M Kronfol1, Mikhail G Dozmorov2, Rong Huang3, Patricia W Slattum1, Joseph L McClay1.   

Abstract

INTRODUCTION: Epigenetics is the study of reversible modifications to chromatin and their extensive and profound effects on gene regulation. To date, the role of epigenetics in personalized medicine has been under-explored. Therefore, this review aims to highlight the vast potential that epigenetics holds. AREAS COVERED: We first review the cell-specific nature of epigenetic states and how these can vary with developmental stage and in response to environmental factors. We then summarize epigenetic biomarkers of disease, with a focus on diagnostic tests, followed by a detailed description of current and pipeline drugs with epigenetic modes of action. Finally, we discuss epigenetic biomarkers of drug response. EXPERT COMMENTARY: Epigenetic variation can yield information on cellular states and developmental histories in ways that genotype information cannot. Furthermore, in contrast to fixed genome sequence, epigenetic patterns are plastic, so correcting aberrant, disease-causing epigenetic marks holds considerable therapeutic promise. While just six epigenetic drugs are currently approved for use in the United States, a larger number is being developed. However, a drawback to current therapeutics is their non-specific effects. Development of locus-specific epigenetic modifiers, used in conjunction with epigenetic biomarkers of response, will enable truly precision interventions.

Entities:  

Keywords:  Chromatin remodeling; DNA methylation; DNMT inhibitors; Epigenetic biomarkers; Epigenetic drugs; HDAC inhibitors; Histone modifications; Neuroscience; Oncology; Pharmacokinetics

Year:  2017        PMID: 29276780      PMCID: PMC5737812          DOI: 10.1080/23808993.2017.1284557

Source DB:  PubMed          Journal:  Expert Rev Precis Med Drug Dev        ISSN: 2380-8993


  117 in total

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Review 5.  TAD disruption as oncogenic driver.

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Journal:  Curr Opin Genet Dev       Date:  2016-04-22       Impact factor: 5.578

6.  Formation of Chromosomal Domains by Loop Extrusion.

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7.  Multitarget stool DNA testing for colorectal-cancer screening.

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Review 8.  DNA methylation profiling in the clinic: applications and challenges.

Authors:  Holger Heyn; Manel Esteller
Journal:  Nat Rev Genet       Date:  2012-09-04       Impact factor: 53.242

9.  The P2 promoter of the IGF1 gene is a major epigenetic locus for GH responsiveness.

Authors:  M Ouni; M P Belot; A L Castell; D Fradin; P Bougnères
Journal:  Pharmacogenomics J       Date:  2015-04-14       Impact factor: 3.550

Review 10.  The success of pharmacogenomics in moving genetic association studies from bench to bedside: study design and implementation of precision medicine in the post-GWAS era.

Authors:  Marylyn D Ritchie
Journal:  Hum Genet       Date:  2012-08-25       Impact factor: 4.132

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  13 in total

1.  HDAC inhibitors rescue multiple disease-causing CFTR variants.

Authors:  Frédéric Anglès; Darren M Hutt; William E Balch
Journal:  Hum Mol Genet       Date:  2019-06-15       Impact factor: 6.150

2.  Sleep and Methylation of Estrogen Receptor Genes, ESR1 and GPER, in Healthy Middle-Aged and Older Women: Findings from the Women 40+ Healthy Aging Study.

Authors:  Elena S Gardini; Serena Fiacco; Laura Mernone; Ulrike Ehlert
Journal:  Nat Sci Sleep       Date:  2020-07-27

3.  BHD-associated kidney cancer exhibits unique molecular characteristics and a wide variety of variants in chromatin remodeling genes.

Authors:  Hisashi Hasumi; Mitsuko Furuya; Kenji Tatsuno; Shogo Yamamoto; Masaya Baba; Yukiko Hasumi; Yasuhiro Isono; Kae Suzuki; Ryosuke Jikuya; Shinji Otake; Kentaro Muraoka; Kimito Osaka; Narihiko Hayashi; Kazuhide Makiyama; Yasuhide Miyoshi; Keiichi Kondo; Noboru Nakaigawa; Takashi Kawahara; Koji Izumi; Junichi Teranishi; Yasushi Yumura; Hiroji Uemura; Yoji Nagashima; Adam R Metwalli; Laura S Schmidt; Hiroyuki Aburatani; W Marston Linehan; Masahiro Yao
Journal:  Hum Mol Genet       Date:  2018-08-01       Impact factor: 6.150

Review 4.  An overview of genetic mutations and epigenetic signatures in the course of pancreatic cancer progression.

Authors:  Aamir Ali Khan; Xinhui Liu; Xinlong Yan; Muhammad Tahir; Sakhawat Ali; Hua Huang
Journal:  Cancer Metastasis Rev       Date:  2021-01-10       Impact factor: 9.264

Review 5.  Precision Medicine in Childhood Asthma: Omic Studies of Treatment Response.

Authors:  Javier Perez-Garcia; Esther Herrera-Luis; Fabian Lorenzo-Diaz; Mario González; Olaia Sardón; Jesús Villar; Maria Pino-Yanes
Journal:  Int J Mol Sci       Date:  2020-04-21       Impact factor: 5.923

6.  Enhancer of Zeste Homologue 2 Inhibition Attenuates TGF-β Dependent Hepatic Stellate Cell Activation and Liver Fibrosis.

Authors:  Rosa Martin-Mateos; Thiago M De Assuncao; Juan Pablo Arab; Nidhi Jalan-Sakrikar; Usman Yaqoob; Thomas Greuter; Vikas K Verma; Angela J Mathison; Sheng Cao; Gwen Lomberk; Philippe Mathurin; Raul Urrutia; Robert C Huebert; Vijay H Shah
Journal:  Cell Mol Gastroenterol Hepatol       Date:  2018-09-15

Review 7.  Epigenetics in cancer therapy and nanomedicine.

Authors:  Annalisa Roberti; Adolfo F Valdes; Ramón Torrecillas; Mario F Fraga; Agustin F Fernandez
Journal:  Clin Epigenetics       Date:  2019-05-16       Impact factor: 6.551

8.  DNA methylation and histone acetylation changes to cytochrome P450 2E1 regulation in normal aging and impact on rates of drug metabolism in the liver.

Authors:  Mohamad M Kronfol; Fay M Jahr; Mikhail G Dozmorov; Palak S Phansalkar; Lin Y Xie; Karolina A Aberg; MaryPeace McRae; Elvin T Price; Patricia W Slattum; Philip M Gerk; Joseph L McClay
Journal:  Geroscience       Date:  2020-03-27       Impact factor: 7.713

9.  Histone acetylation at the sulfotransferase 1a1 gene is associated with its hepatic expression in normal aging.

Authors:  Mohamad M Kronfol; Sara Abudahab; Mikhail G Dozmorov; Fay M Jahr; Matthew S Halquist; MaryPeace McRae; Dayanjan S Wijesinghe; Elvin T Price; Patricia W Slattum; Joseph L McClay
Journal:  Pharmacogenet Genomics       Date:  2021-12-01       Impact factor: 2.089

10.  Proteomics and phosphoproteomics in precision medicine: applications and challenges.

Authors:  Girolamo Giudice; Evangelia Petsalaki
Journal:  Brief Bioinform       Date:  2019-05-21       Impact factor: 11.622

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