Literature DB >> 29263920

UV-induced damage to DNA: effect of cytosine methylation on pyrimidine dimerization.

Lara Martinez-Fernandez1, Akos Banyasz2, Luciana Esposito1, Dimitra Markovitsi2, Roberto Improta1.   

Abstract

Methylation/demethylation of cytosine plays an important role in epigenetic signaling, the reversibility of epigenetic modifications offering important opportunities for targeted therapies. Actually, methylated sites have been correlated with mutational hotspots detected in skin cancers. The present brief review discusses the physicochemical parameters underlying the specific ultraviolet-induced reactivity of methylated cytosine. It focuses on dimerization reactions giving rise to cyclobutane pyrimidine dimers and pyrimidine (6-4) pyrimidone adducts. According to recent studies, four conformational and electronic factors that are affected by cytosine methylation may control these reactions: the red-shift of the absorption spectrum, the lengthening of the excited state lifetime, changes in the sugar puckering modifying the stacking between reactive pyrimidines and an increase in the rigidity of duplexes favoring excitation energy transfer toward methylated pyrimidines.

Entities:  

Year:  2017        PMID: 29263920      PMCID: PMC5661629          DOI: 10.1038/sigtrans.2017.21

Source DB:  PubMed          Journal:  Signal Transduct Target Ther        ISSN: 2059-3635


  61 in total

Review 1.  UV-induced DNA Damage: The Role of Electronic Excited States.

Authors:  Dimitra Markovitsi
Journal:  Photochem Photobiol       Date:  2015-12-18       Impact factor: 3.421

2.  DNA modification mechanisms and gene activity during development.

Authors:  R Holliday; J E Pugh
Journal:  Science       Date:  1975-01-24       Impact factor: 47.728

3.  Ultrafast deactivation channel for thymine dimerization.

Authors:  Martial Boggio-Pasqua; Gerrit Groenhof; Lars V Schäfer; Helmut Grubmüller; Michael A Robb
Journal:  J Am Chem Soc       Date:  2007-08-16       Impact factor: 15.419

4.  UV-Induced Charge Transfer States in DNA Promote Sequence Selective Self-Repair.

Authors:  Dominik Benjamin Bucher; Corinna Lucia Kufner; Alexander Schlueter; Thomas Carell; Wolfgang Zinth
Journal:  J Am Chem Soc       Date:  2015-12-21       Impact factor: 15.419

Review 5.  Electronic excitations in Guanine quadruplexes.

Authors:  Pascale Changenet-Barret; Ying Hua; Dimitra Markovitsi
Journal:  Top Curr Chem       Date:  2015

Review 6.  Quantum Mechanical Studies on the Photophysics and the Photochemistry of Nucleic Acids and Nucleobases.

Authors:  Roberto Improta; Fabrizio Santoro; Lluís Blancafort
Journal:  Chem Rev       Date:  2016-03-01       Impact factor: 60.622

7.  N4-methylation of cytosine drastically favors the formation of (6-4) photoproducts in a TCG context.

Authors:  Thierry Douki; Jarah A Meador; Izabel Bérard; Aude Wack
Journal:  Photochem Photobiol       Date:  2014-11-10       Impact factor: 3.421

8.  UVB-induced cyclobutane pyrimidine dimer frequency correlates with skin cancer mutational hotspots in p53.

Authors:  R Drouin; J P Therrien
Journal:  Photochem Photobiol       Date:  1997-11       Impact factor: 3.421

9.  Modeling thymine photodimerizations in DNA: mechanism and correlation diagrams.

Authors:  Lluís Blancafort; Annapaola Migani
Journal:  J Am Chem Soc       Date:  2007-11-06       Impact factor: 15.419

Review 10.  Mutations in the p53 tumor suppressor gene: clues to cancer etiology and molecular pathogenesis.

Authors:  M S Greenblatt; W P Bennett; M Hollstein; C C Harris
Journal:  Cancer Res       Date:  1994-09-15       Impact factor: 12.701

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  9 in total

1.  Study of conformational transitions of i-motif DNA using time-resolved fluorescence and multivariate analysis methods.

Authors:  Sanae Benabou; Cyril Ruckebusch; Michel Sliwa; Anna Aviñó; Ramon Eritja; Raimundo Gargallo; Anna de Juan
Journal:  Nucleic Acids Res       Date:  2019-07-26       Impact factor: 16.971

2.  The epigenetic DNA modification 5-carboxylcytosine promotes high levels of cyclobutane pyrimidine dimer formation upon UVB irradiation.

Authors:  Sang-In Kim; Gerd P Pfeifer
Journal:  Genome Instab Dis       Date:  2021-01-02

Review 3.  Deciphering UV-induced DNA Damage Responses to Prevent and Treat Skin Cancer.

Authors:  Jihoon W Lee; Kajan Ratnakumar; Kai-Feng Hung; Daiki Rokunohe; Masaoki Kawasumi
Journal:  Photochem Photobiol       Date:  2020-05-04       Impact factor: 3.421

Review 4.  Epigenetic Deregulation of Apoptosis in Cancers.

Authors:  Ezgi Ozyerli-Goknar; Tugba Bagci-Onder
Journal:  Cancers (Basel)       Date:  2021-06-27       Impact factor: 6.639

5.  DNA methylation profile is associated with the osteogenic potential of three distinct human odontogenic stem cells.

Authors:  Tingting Ai; Jieni Zhang; Xuedong Wang; Xiaowen Zheng; Xueyan Qin; Qian Zhang; Weiran Li; Wei Hu; Jiuxiang Lin; Feng Chen
Journal:  Signal Transduct Target Ther       Date:  2018-01-12

6.  A framework for mutational signature analysis based on DNA shape parameters.

Authors:  Aleksandra Karolak; Jurica Levatić; Fran Supek
Journal:  PLoS One       Date:  2022-01-11       Impact factor: 3.240

7.  The Excited State Dynamics of a Mutagenic Cytidine Etheno Adduct Investigated by Combining Time-Resolved Spectroscopy and Quantum Mechanical Calculations.

Authors:  Paloma Lizondo-Aranda; Lara Martínez-Fernández; Miguel A Miranda; Roberto Improta; Thomas Gustavsson; Virginie Lhiaubet-Vallet
Journal:  J Phys Chem Lett       Date:  2021-12-30       Impact factor: 6.888

8.  Concomitant DNA methylation and transcriptome signatures define epidermal responses to acute solar UV radiation.

Authors:  Nicholas Holzscheck; Jörn Söhle; Torsten Schläger; Cassandra Falckenhayn; Elke Grönniger; Ludger Kolbe; Horst Wenck; Lara Terstegen; Lars Kaderali; Marc Winnefeld; Katharina Gorges
Journal:  Sci Rep       Date:  2020-07-31       Impact factor: 4.379

9.  EFFECTOR OF TRANSCRIPTION factors are novel plant-specific regulators associated with genomic DNA methylation in Arabidopsis.

Authors:  Francesca Tedeschi; Paride Rizzo; Bui Thi Mai Huong; Andreas Czihal; Twan Rutten; Lothar Altschmied; Sarah Scharfenberg; Ivo Grosse; Claude Becker; Detlef Weigel; Helmut Bäumlein; Markus Kuhlmann
Journal:  New Phytol       Date:  2018-09-25       Impact factor: 10.151

  9 in total

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