Literature DB >> 29261183

Revisiting mitochondrial diagnostic criteria in the new era of genomics.

Peter Witters1, Ann Saada2,3, Tomas Honzik4, Marketa Tesarova4, Stephanie Kleinle5, Rita Horvath6, Amy Goldstein7, Eva Morava1,7.   

Abstract

PurposeDiagnosing primary mitochondrial diseases (MDs) is challenging in clinical practice. The mitochondrial disease criteria (MDC) have been developed to quantify the clinical picture and evaluate the probability of an underlying MD and the need for a muscle biopsy. In this new genetic era with next-generation sequencing in routine practice, we aim to validate the diagnostic value of MDC.MethodsWe retrospectively studied MDC in a multicenter cohort of genetically confirmed primary MD patients.ResultsWe studied 136 patients (61 male, 91 nuclear DNA (nDNA) mutations). Forty-five patients (33%) had probable MD and 69 (51%) had definite MD according to the MDC. A muscle biopsy was performed in 63 patients (47%). Patients with nDNA mutations versus mitochondrial DNA mutations were younger (6.4 ± 9.7 versus 19.5 ± 17.3 y) and had higher MDC (7.07 ± 1.12/8 versus 5.69 ± 1.94/8). At a cutoff of 6.5/8, the sensitivity to diagnose patients with nDNA mutations is 72.5% with a positive predictive value of 69.5%. In the nDNA mutation group, whole-exome sequencing could diagnose patients with lower scores (MDC (6.84 ± 1.51/8) compared to Sanger sequencing MDC (7.44 ± 1.13/8, P = 0.025)). Moreover 7/8 patients diagnosed with possible MD by MDC were diagnosed by whole-exome sequencing.ConclusionMDC remain very useful in the clinical diagnosis of MD, in interpreting whole-exome results and deciding on the need for performing muscle biopsy.

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Year:  2017        PMID: 29261183     DOI: 10.1038/gim.2017.125

Source DB:  PubMed          Journal:  Genet Med        ISSN: 1098-3600            Impact factor:   8.822


  29 in total

1.  Molecular diagnosis of infantile mitochondrial disease with targeted next-generation sequencing.

Authors:  Sarah E Calvo; Alison G Compton; Steven G Hershman; Sze Chern Lim; Daniel S Lieber; Elena J Tucker; Adrienne Laskowski; Caterina Garone; Shangtao Liu; David B Jaffe; John Christodoulou; Janice M Fletcher; Damien L Bruno; Jack Goldblatt; Salvatore Dimauro; David R Thorburn; Vamsi K Mootha
Journal:  Sci Transl Med       Date:  2012-01-25       Impact factor: 17.956

2.  LYRM7 mutations cause a multifocal cavitating leukoencephalopathy with distinct MRI appearance.

Authors:  Cristina Dallabona; Truus E M Abbink; Rosalba Carrozzo; Alessandra Torraco; Andrea Legati; Carola G M van Berkel; Marcello Niceta; Tiziana Langella; Daniela Verrigni; Teresa Rizza; Daria Diodato; Fiorella Piemonte; Eleonora Lamantea; Mingyan Fang; Jianguo Zhang; Diego Martinelli; Elsa Bevivino; Carlo Dionisi-Vici; Adeline Vanderver; Sunny G Philip; Manju A Kurian; Ishwar C Verma; Sunita Bijarnia-Mahay; Sandra Jacinto; Fatima Furtado; Patrizia Accorsi; Anna Ardissone; Isabella Moroni; Ileana Ferrero; Marco Tartaglia; Paola Goffrini; Daniele Ghezzi; Marjo S van der Knaap; Enrico Bertini
Journal:  Brain       Date:  2016-01-29       Impact factor: 13.501

3.  A post-hoc comparison of the utility of sanger sequencing and exome sequencing for the diagnosis of heterogeneous diseases.

Authors:  Kornelia Neveling; Ilse Feenstra; Christian Gilissen; Lies H Hoefsloot; Erik-Jan Kamsteeg; Arjen R Mensenkamp; Richard J T Rodenburg; Helger G Yntema; Liesbeth Spruijt; Sascha Vermeer; Tuula Rinne; Koen L van Gassen; Danielle Bodmer; Dorien Lugtenberg; Rick de Reuver; Wendy Buijsman; Ronny C Derks; Nienke Wieskamp; Bert van den Heuvel; Marjolijn J L Ligtenberg; Hannie Kremer; David A Koolen; Bart P C van de Warrenburg; Frans P M Cremers; Carlo L M Marcelis; Jan A M Smeitink; Saskia B Wortmann; Wendy A G van Zelst-Stams; Joris A Veltman; Han G Brunner; Hans Scheffer; Marcel R Nelen
Journal:  Hum Mutat       Date:  2013-10-18       Impact factor: 4.878

4.  Mitochondrial disease criteria: diagnostic applications in children.

Authors:  E Morava; L van den Heuvel; F Hol; M C de Vries; M Hogeveen; R J Rodenburg; J A M Smeitink
Journal:  Neurology       Date:  2006-11-28       Impact factor: 9.910

Review 5.  Mutations causing mitochondrial disease: What is new and what challenges remain?

Authors:  Robert N Lightowlers; Robert W Taylor; Doug M Turnbull
Journal:  Science       Date:  2015-09-24       Impact factor: 47.728

6.  Accurate mitochondrial DNA sequencing using off-target reads provides a single test to identify pathogenic point mutations.

Authors:  Helen R Griffin; Angela Pyle; Emma L Blakely; Charlotte L Alston; Jennifer Duff; Gavin Hudson; Rita Horvath; Ian J Wilson; Mauro Santibanez-Koref; Robert W Taylor; Patrick F Chinnery
Journal:  Genet Med       Date:  2014-06-05       Impact factor: 8.822

7.  New perspective in diagnostics of mitochondrial disorders: two years' experience with whole-exome sequencing at a national paediatric centre.

Authors:  Ewa Pronicka; Dorota Piekutowska-Abramczuk; Elżbieta Ciara; Joanna Trubicka; Dariusz Rokicki; Agnieszka Karkucińska-Więckowska; Magdalena Pajdowska; Elżbieta Jurkiewicz; Paulina Halat; Joanna Kosińska; Agnieszka Pollak; Małgorzata Rydzanicz; Piotr Stawinski; Maciej Pronicki; Małgorzata Krajewska-Walasek; Rafał Płoski
Journal:  J Transl Med       Date:  2016-06-12       Impact factor: 5.531

8.  MitoCarta2.0: an updated inventory of mammalian mitochondrial proteins.

Authors:  Sarah E Calvo; Karl R Clauser; Vamsi K Mootha
Journal:  Nucleic Acids Res       Date:  2015-10-07       Impact factor: 16.971

Review 9.  Mitochondrial disease in adults: what's old and what's new?

Authors:  Patrick F Chinnery
Journal:  EMBO Mol Med       Date:  2015-12       Impact factor: 12.137

Review 10.  Mitochondrial disorders in children: toward development of small-molecule treatment strategies.

Authors:  Werner Jh Koopman; Julien Beyrath; Cheuk-Wing Fung; Saskia Koene; Richard J Rodenburg; Peter Hgm Willems; Jan Am Smeitink
Journal:  EMBO Mol Med       Date:  2016-04-01       Impact factor: 12.137

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  16 in total

1.  A new opportunity: metabolism and neuropsychiatric disorders.

Authors:  Tamas Kozicz; E Morava
Journal:  J Inherit Metab Dis       Date:  2018-07       Impact factor: 4.982

2.  Early diagnosis of Pearson syndrome in neonatal intensive care following rapid mitochondrial genome sequencing in tandem with exome sequencing.

Authors:  Lauren S Akesson; Stefanie Eggers; Clare J Love; Belinda Chong; Emma I Krzesinski; Natasha J Brown; Tiong Y Tan; Christopher M Richmond; David R Thorburn; John Christodoulou; Matthew F Hunter; Sebastian Lunke; Zornitza Stark
Journal:  Eur J Hum Genet       Date:  2019-07-29       Impact factor: 4.246

Review 3.  Time to harmonize mitochondrial syndrome nomenclature and classification: A consensus from the North American Mitochondrial Disease Consortium (NAMDC).

Authors:  Valentina Emmanuele; Jaya Ganesh; Georgirene Vladutiu; Richard Haas; Douglas Kerr; Russell P Saneto; Bruce H Cohen; Johan L K Van Hove; Fernando Scaglia; Charles Hoppel; Xiomara Q Rosales; Emanuele Barca; Richard Buchsbaum; John L Thompson; Salvatore DiMauro; Michio Hirano
Journal:  Mol Genet Metab       Date:  2022-05-13       Impact factor: 4.204

4.  Novel NDUFA13 Mutations Associated with OXPHOS Deficiency and Leigh Syndrome: A Second Family Report.

Authors:  Adrián González-Quintana; Inés García-Consuegra; Amaya Belanger-Quintana; Pablo Serrano-Lorenzo; Alejandro Lucia; Alberto Blázquez; Jorge Docampo; Cristina Ugalde; María Morán; Joaquín Arenas; Miguel A Martín
Journal:  Genes (Basel)       Date:  2020-07-26       Impact factor: 4.096

5.  Expanding the Clinical Spectrum of LONP1-Related Mitochondrial Cytopathy.

Authors:  Fady Hannah-Shmouni; Lauren MacNeil; Lauren Brady; Mats I Nilsson; Mark Tarnopolsky
Journal:  Front Neurol       Date:  2019-10-04       Impact factor: 4.003

6.  Diagnosing Mitochondrial Disorders Remains Challenging in the Omics Era.

Authors:  Patrick Forny; Emma Footitt; James E Davison; Amanda Lam; Cathy E Woodward; Spyros Batzios; Sanjay Bhate; Anupam Chakrapani; Maureen Cleary; Paul Gissen; Stephanie Grunewald; Jane A Hurst; Richard Scott; Simon Heales; Thomas S Jacques; Thomas Cullup; Shamima Rahman
Journal:  Neurol Genet       Date:  2021-05-25

7.  Case Report: Mitochondrial Encephalomyopathy Presents as Epilepsy, Ataxia, and Dystonia With a Rare Mutation in MT-TW.

Authors:  Shuang Wang; Jing Miao; Jiachun Feng
Journal:  Front Neurol       Date:  2021-07-01       Impact factor: 4.003

Review 8.  Genetics of mitochondrial diseases: Identifying mutations to help diagnosis.

Authors:  Sarah L Stenton; Holger Prokisch
Journal:  EBioMedicine       Date:  2020-05-23       Impact factor: 11.205

9.  Mitochondrial diseases in North America: An analysis of the NAMDC Registry.

Authors:  Emanuele Barca; Yuelin Long; Victoria Cooley; Robert Schoenaker; Valentina Emmanuele; Salvatore DiMauro; Bruce H Cohen; Amel Karaa; Georgirene D Vladutiu; Richard Haas; Johan L K Van Hove; Fernando Scaglia; Sumit Parikh; Jirair K Bedoyan; Susanne D DeBrosse; Ralitza H Gavrilova; Russell P Saneto; Gregory M Enns; Peter W Stacpoole; Jaya Ganesh; Austin Larson; Zarazuela Zolkipli-Cunningham; Marni J Falk; Amy C Goldstein; Mark Tarnopolsky; Andrea Gropman; Kathryn Camp; Danuta Krotoski; Kristin Engelstad; Xiomara Q Rosales; Joshua Kriger; Johnston Grier; Richard Buchsbaum; John L P Thompson; Michio Hirano
Journal:  Neurol Genet       Date:  2020-03-02

10.  Impaired mitochondrial complex I function as a candidate driver in the biological stress response and a concomitant stress-induced brain metabolic reprogramming in male mice.

Authors:  Tim L Emmerzaal; Graeme Preston; Bram Geenen; Vivienne Verweij; Maximilian Wiesmann; Elisavet Vasileiou; Femke Grüter; Corné de Groot; Jeroen Schoorl; Renske de Veer; Monica Roelofs; Martijn Arts; Yara Hendriksen; Eva Klimars; Taraka R Donti; Brett H Graham; Eva Morava; Richard J Rodenburg; Tamas Kozicz
Journal:  Transl Psychiatry       Date:  2020-06-01       Impact factor: 6.222

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