Literature DB >> 29251283

Genome-Wide Expression Profiles Drive Discovery of Novel Compounds that Reduce Binge Drinking in Mice.

Laura B Ferguson1, Angela R Ozburn2,3, Igor Ponomarev1, Pamela Metten2,3, Matthew Reilly4, John C Crabbe2,3, R Adron Harris1, R Dayne Mayfield1.   

Abstract

Transcriptome-based drug discovery has identified new treatments for some complex diseases, but has not been applied to alcohol use disorder (AUD) or other psychiatric diseases, where there is a critical need for improved pharmacotherapies. High Drinking in the Dark (HDID-1) mice are a genetic model of AUD risk that have been selectively bred (from the HS/Npt line) to achieve intoxicating blood alcohol levels (BALs) after binge-like drinking. We compared brain gene expression of HDID-1 and HS/Npt mice, to determine a molecular signature for genetic risk for high intensity, binge-like drinking. Using multiple computational methods, we queried LINCS-L1000 (Library of Integrated Network-Based Cellular Signatures), a database containing gene expression signatures of thousands of compounds, to predict candidate drugs with the greatest potential to decrease alcohol consumption. Our analyses predicted novel compounds for testing, many with anti-inflammatory properties, providing further support for a neuroimmune mechanism of excessive alcohol drinking. We validated the top 2 candidates in vivo as a proof-of-concept. Terreic acid (a Bruton's tyrosine kinase inhibitor) and pergolide (a dopamine and serotonin receptor agonist) robustly reduced alcohol intake and BALs in HDID-1 mice, providing the first evidence for transcriptome-based drug discovery to target an addiction trait. Effective drug treatments for many psychiatric diseases are lacking, and the emerging tools and approaches outlined here offer researchers studying complex diseases renewed opportunities to discover new or repurpose existing compounds and expedite treatment options.

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Year:  2017        PMID: 29251283      PMCID: PMC5916369          DOI: 10.1038/npp.2017.301

Source DB:  PubMed          Journal:  Neuropsychopharmacology        ISSN: 0893-133X            Impact factor:   7.853


  54 in total

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Authors:  Fulton T Crews; Colleen J Lawrimore; T Jordan Walter; Leon G Coleman
Journal:  Neuropharmacology       Date:  2017-02-01       Impact factor: 5.250

2.  Treatment of obesity with celastrol.

Authors:  Junli Liu; Jaemin Lee; Mario Andres Salazar Hernandez; Ralph Mazitschek; Umut Ozcan
Journal:  Cell       Date:  2015-05-21       Impact factor: 41.582

3.  Analysis of genome-wide association data highlights candidates for drug repositioning in psychiatry.

Authors:  Hon-Cheong So; Carlos Kwan-Long Chau; Wan-To Chiu; Kin-Sang Ho; Cho-Pong Lo; Stephanie Ho-Yue Yim; Pak-Chung Sham
Journal:  Nat Neurosci       Date:  2017-08-14       Impact factor: 24.884

4.  Alcohol preference drinking in a mouse line selectively bred for high drinking in the dark.

Authors:  John C Crabbe; Stephanie E Spence; Lauren L Brown; Pamela Metten
Journal:  Alcohol       Date:  2010-12-30       Impact factor: 2.405

5.  RN486, a selective Bruton's tyrosine kinase inhibitor, abrogates immune hypersensitivity responses and arthritis in rodents.

Authors:  Daigen Xu; Yong Kim; Jennifer Postelnek; Minh Diem Vu; Dong-Qing Hu; Cheng Liao; Mike Bradshaw; Jonathan Hsu; Jun Zhang; Achal Pashine; Dinesh Srinivasan; John Woods; Anita Levin; Alison O'Mahony; Timothy D Owens; Yan Lou; Ronald J Hill; Satwant Narula; Julie DeMartino; Jay S Fine
Journal:  J Pharmacol Exp Ther       Date:  2012-01-06       Impact factor: 4.030

6.  A line of mice selected for high blood ethanol concentrations shows drinking in the dark to intoxication.

Authors:  John C Crabbe; Pamela Metten; Justin S Rhodes; Chia-Hua Yu; Lauren Lyon Brown; Tamara J Phillips; Deborah A Finn
Journal:  Biol Psychiatry       Date:  2008-12-18       Impact factor: 13.382

7.  A Next Generation Connectivity Map: L1000 Platform and the First 1,000,000 Profiles.

Authors:  Aravind Subramanian; Rajiv Narayan; Steven M Corsello; David D Peck; Ted E Natoli; Xiaodong Lu; Joshua Gould; John F Davis; Andrew A Tubelli; Jacob K Asiedu; David L Lahr; Jodi E Hirschman; Zihan Liu; Melanie Donahue; Bina Julian; Mariya Khan; David Wadden; Ian C Smith; Daniel Lam; Arthur Liberzon; Courtney Toder; Mukta Bagul; Marek Orzechowski; Oana M Enache; Federica Piccioni; Sarah A Johnson; Nicholas J Lyons; Alice H Berger; Alykhan F Shamji; Angela N Brooks; Anita Vrcic; Corey Flynn; Jacqueline Rosains; David Y Takeda; Roger Hu; Desiree Davison; Justin Lamb; Kristin Ardlie; Larson Hogstrom; Peyton Greenside; Nathanael S Gray; Paul A Clemons; Serena Silver; Xiaoyun Wu; Wen-Ning Zhao; Willis Read-Button; Xiaohua Wu; Stephen J Haggarty; Lucienne V Ronco; Jesse S Boehm; Stuart L Schreiber; John G Doench; Joshua A Bittker; David E Root; Bang Wong; Todd R Golub
Journal:  Cell       Date:  2017-11-30       Impact factor: 41.582

8.  Prevalence of alcohol dependence among US adult drinkers, 2009-2011.

Authors:  Marissa B Esser; Sarra L Hedden; Dafna Kanny; Robert D Brewer; Joseph C Gfroerer; Timothy S Naimi
Journal:  Prev Chronic Dis       Date:  2014-11-20       Impact factor: 2.830

9.  Reversal of cancer gene expression correlates with drug efficacy and reveals therapeutic targets.

Authors:  Bin Chen; Li Ma; Hyojung Paik; Marina Sirota; Wei Wei; Mei-Sze Chua; Samuel So; Atul J Butte
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10.  Transcriptional data: a new gateway to drug repositioning?

Authors:  Francesco Iorio; Timothy Rittman; Hong Ge; Michael Menden; Julio Saez-Rodriguez
Journal:  Drug Discov Today       Date:  2012-08-07       Impact factor: 7.851

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  21 in total

Review 1.  From gene networks to drugs: systems pharmacology approaches for AUD.

Authors:  Laura B Ferguson; R Adron Harris; Roy Dayne Mayfield
Journal:  Psychopharmacology (Berl)       Date:  2018-03-01       Impact factor: 4.530

2.  Effects of Pharmacologically Targeting Neuroimmune Pathways on Alcohol Drinking in Mice Selectively Bred to Drink to Intoxication.

Authors:  Angela R Ozburn; Pamela Metten; Sheena Potretzke; Kayla G Townsley; Yuri A Blednov; John C Crabbe
Journal:  Alcohol Clin Exp Res       Date:  2020-01-13       Impact factor: 3.455

3.  Persistence of Drug Memories: Melting Transcriptomes.

Authors:  R Dayne Mayfield; R Adron Harris
Journal:  Biol Psychiatry       Date:  2018-12-15       Impact factor: 13.382

4.  Targeting the Glucocorticoid Receptor Reduces Binge-Like Drinking in High Drinking in the Dark (HDID-1) Mice.

Authors:  Antonia M Savarese; Angela R Ozburn; Pamela Metten; Jason P Schlumbohm; Wyatt R Hack; Kathryn LeMoine; Hazel Hunt; Felix Hausch; Michael Bauder; John C Crabbe
Journal:  Alcohol Clin Exp Res       Date:  2020-03-27       Impact factor: 3.455

5.  The impact of Drinking in the Dark (DID) procedural manipulations on ethanol intake in High Drinking in the Dark (HDID) mice.

Authors:  Antonia M Savarese; Angela R Ozburn; Amanda M Barkley-Levenson; Pamela Metten; John C Crabbe
Journal:  Alcohol       Date:  2021-02-06       Impact factor: 2.558

Review 6.  Signature-based approaches for informed drug repurposing: targeting CNS disorders.

Authors:  Rammohan Shukla; Nicholas D Henkel; Khaled Alganem; Abdul-Rizaq Hamoud; James Reigle; Rawan S Alnafisah; Hunter M Eby; Ali S Imami; Justin F Creeden; Scott A Miruzzi; Jaroslaw Meller; Robert E Mccullumsmith
Journal:  Neuropsychopharmacology       Date:  2020-06-30       Impact factor: 8.294

Review 7.  Bioinformatic and biological avenues for understanding alcohol use disorder.

Authors:  Emily K Grantham; Sean P Farris
Journal:  Alcohol       Date:  2018-08-23       Impact factor: 2.405

8.  Long-term alcohol drinking in High Drinking in the Dark mice is stable for many months and does not show alcohol deprivation effects.

Authors:  John C Crabbe; Wyatt R Hack; Angela R Ozburn; Antonia M Savarese; Pamela Metten
Journal:  Addict Biol       Date:  2021-07-05       Impact factor: 4.280

Review 9.  Immune treatments for alcohol use disorder: A translational framework.

Authors:  Lindsay R Meredith; Elizabeth M Burnette; Erica N Grodin; Michael R Irwin; Lara A Ray
Journal:  Brain Behav Immun       Date:  2021-07-31       Impact factor: 19.227

Review 10.  Sex Differences in the Brain Transcriptome Related to Alcohol Effects and Alcohol Use Disorder.

Authors:  Robert Hitzemann; Susan E Bergeson; Ari E Berman; Jason A Bubier; Elissa J Chesler; Deborah A Finn; Matthew Hein; Paula Hoffman; Andrew Holmes; Brent R Kisby; Denesa Lockwood; Kerrie H Lodowski; Michelle McManus; Julie A Owen; Angela R Ozburn; Praneetha Panthagani; Igor Ponomarev; Laura Saba; Boris Tabakoff; Aashlesha Walchale; Robert W Williams; Tamara J Phillips
Journal:  Biol Psychiatry       Date:  2021-05-01       Impact factor: 12.810

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