Literature DB >> 29247798

Circular RNA expression profile of articular chondrocytes in an IL-1β-induced mouse model of osteoarthritis.

Zhibin Zhou1, Di Du1, Aimin Chen2, Lei Zhu3.   

Abstract

Osteoarthritis (OA) is a widely prevalent degenerative joint disease characterized by articular cartilage degradation and joint inflammation. The pathogenesis of OA remains unclear, leading to a lack of effective treatment. Previous studies have reported that circular RNAs (circRNAs) are involved in the development of various diseases. However, the function of circRNAs and their roles in OA is largely unknown. Therefore, we aimed to investigate changes in circRNA expression and predict their functions in OA by using bioinformatics analysis. An OA model was established in mouse articular chondrocytes (MACs) treated by interleukin-1β (IL-1β), and then the circRNA profile was screened by Next Generation Sequencing. By comparing circRNA expression in IL-1β- treated MACs and normal controls, differentially expressed circRNAs were identified during OA pathogenesis, and differential expression levels of selected circRNAs were validated by qRT-PCR. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses were employed to predict the functions of these circRNAs. Because circRNAs can act as "miRNA sponges", we also constructed a circRNA-miRNA network to predict their functions. A total of 255 circRNAs were found to be differentially expressed in IL-1β-treated MACs (p≤0.05; fold-change≥2) from the expression of the normal controls. Among them, 119 circRNAs were significantly up-regulated, and the other 136 were down-regulated. Seven circRNAs were randomly selected to verify the reliability of these profiles by quantitative qRT-PCR. After obtaining the parental genes of differentially expressed circRNA, the top 30 enrichment GO entries and KEGG pathways were annotated. Then, two significantly differentially expressed circRNAs (mmu-circRNA-30365 and mmu-circRNA-36866) were identified and selected for further analysis, meanwhile a circRNA-miRNA regulation network was created and the top five most likely functional-related target miRNAs of the circRNAs were collected. Although the exact mechanisms and biological functions of these circRNAs in the development of OA need further exploration, our findings do suggest that the differentially expressed circRNAs were involved in the pathogenesis of OA. Thus, our study brings us closer to understanding the pathogenic mechanisms and finding new molecular targets for the clinical treatment of osteoarthritis.
Copyright © 2017 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Circular RNA; Mouse articular chondrocyte; Next generation sequencing; Osteoarthritis

Mesh:

Substances:

Year:  2017        PMID: 29247798     DOI: 10.1016/j.gene.2017.12.020

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  28 in total

1.  Circ_0114876 promoted IL-1β-induced chondrocyte injury by targeting miR-671/TRAF2 axis.

Authors:  Qiushi Wang; Simin Luo; Jie Yang; Jieruo Li; Songwei Huan; Guorong She; Zhengang Zha
Journal:  Biotechnol Lett       Date:  2021-01-06       Impact factor: 2.461

2.  circRNA.33186 Contributes to the Pathogenesis of Osteoarthritis by Sponging miR-127-5p.

Authors:  Zhi-Bin Zhou; Gao-Xiang Huang; Qiang Fu; Bin Han; Jia-Jia Lu; Ai-Min Chen; Lei Zhu
Journal:  Mol Ther       Date:  2019-01-15       Impact factor: 11.454

3.  Runx2 and Runx3 differentially regulate articular chondrocytes during surgically induced osteoarthritis development.

Authors:  Kosei Nagata; Hironori Hojo; Song Ho Chang; Hiroyuki Okada; Fumiko Yano; Ryota Chijimatsu; Yasunori Omata; Daisuke Mori; Yuma Makii; Manabu Kawata; Taizo Kaneko; Yasuhide Iwanaga; Hideki Nakamoto; Yuji Maenohara; Naohiro Tachibana; Hisatoshi Ishikura; Junya Higuchi; Yuki Taniguchi; Shinsuke Ohba; Ung-Il Chung; Sakae Tanaka; Taku Saito
Journal:  Nat Commun       Date:  2022-10-19       Impact factor: 17.694

4.  High-throughput data on circular RNA reveal novel insights into chronic glomerulonephritis.

Authors:  Ya-Chen Gao; Nan-Nan Jiang; Xiu-Juan Qin; Hui Jiang; Liang-Bing Wei; Jia-Rong Gao
Journal:  Genes Genomics       Date:  2022-10-20       Impact factor: 2.164

Review 5.  Osteoarthritis year in review 2017: genetics and epigenetics.

Authors:  M J Peffers; P Balaskas; A Smagul
Journal:  Osteoarthritis Cartilage       Date:  2017-10-06       Impact factor: 6.576

6.  Knockdown of hsa_circ_0134111 alleviates the symptom of osteoarthritis via sponging microRNA-224-5p.

Authors:  Lecheng Zhang; Cong Sui; Yuelei Zhang; Gang Wang; Zongsheng Yin
Journal:  Cell Cycle       Date:  2021-05-04       Impact factor: 4.534

7.  Effects of conditioned medium obtained from human adipose-derived stem cells on skin inflammation.

Authors:  Fumiko Yano; Taiga Takeda; Takafumi Kurokawa; Toshiya Tsubaki; Ryota Chijimatsu; Keita Inoue; Shinsaku Tsuji; Sakae Tanaka; Taku Saito
Journal:  Regen Ther       Date:  2022-04-16       Impact factor: 3.651

8.  Exhausting circ_0136474 and Restoring miR-766-3p Attenuate Chondrocyte Oxidative Injury in IL-1β-Induced Osteoarthritis Progression Through Regulating DNMT3A.

Authors:  Haiquan Zhu; Shaobo Zhu; Xiuchao Shang; Xiangsheng Meng; Sheng Jing; Li Yu; Yu Deng
Journal:  Front Genet       Date:  2021-05-21       Impact factor: 4.599

9.  Circ-SPG11 knockdown hampers IL-1β-induced osteoarthritis progression via targeting miR-337-3p/ADAMTS5.

Authors:  Yongqiang Liu; Qian Li; Zhida Gao; Fang Lei; Xuefeng Gao
Journal:  J Orthop Surg Res       Date:  2021-06-17       Impact factor: 2.359

10.  The role of circRNA derived from RUNX2 in the serum of osteoarthritis and its clinical value.

Authors:  Chengyun Wang; Nanzhu Li; Qi Liu; Lianbin Su; Sisheng Wang; Yongfa Chen; Maosheng Liu; Huirong Lin
Journal:  J Clin Lab Anal       Date:  2021-06-24       Impact factor: 2.352

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