Literature DB >> 29236685

Origin and differentiation of human memory CD8 T cells after vaccination.

Rama S Akondy1,2, Mark Fitch3, Srilatha Edupuganti4, Shu Yang1,2, Haydn T Kissick5, Kelvin W Li6, Ben A Youngblood1,2,7, Hossam A Abdelsamed7, Donald J McGuire1, Kristen W Cohen8, Gabriela Alexe9,10, Shashi Nagar4, Megan M McCausland1,2, Satish Gupta11, Pramila Tata11, W Nicholas Haining9,10, M Juliana McElrath8, David Zhang12, Bin Hu12, William J Greenleaf13, Jorg J Goronzy12, Mark J Mulligan1,4, Marc Hellerstein3,6, Rafi Ahmed1,2.   

Abstract

The differentiation of human memory CD8 T cells is not well understood. Here we address this issue using the live yellow fever virus (YFV) vaccine, which induces long-term immunity in humans. We used in vivo deuterium labelling to mark CD8 T cells that proliferated in response to the virus and then assessed cellular turnover and longevity by quantifying deuterium dilution kinetics in YFV-specific CD8 T cells using mass spectrometry. This longitudinal analysis showed that the memory pool originates from CD8 T cells that divided extensively during the first two weeks after infection and is maintained by quiescent cells that divide less than once every year (doubling time of over 450 days). Although these long-lived YFV-specific memory CD8 T cells did not express effector molecules, their epigenetic landscape resembled that of effector CD8 T cells. This open chromatin profile at effector genes was maintained in memory CD8 T cells isolated even a decade after vaccination, indicating that these cells retain an epigenetic fingerprint of their effector history and remain poised to respond rapidly upon re-exposure to the pathogen.

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Year:  2017        PMID: 29236685      PMCID: PMC6037316          DOI: 10.1038/nature24633

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   69.504


  30 in total

1.  Cytotoxic T-cell memory without antigen.

Authors:  L L Lau; B D Jamieson; T Somasundaram; R Ahmed
Journal:  Nature       Date:  1994-06-23       Impact factor: 49.962

2.  Long-lasting stem cell-like memory CD8+ T cells with a naïve-like profile upon yellow fever vaccination.

Authors:  Silvia A Fuertes Marraco; Charlotte Soneson; Laurène Cagnon; Philippe O Gannon; Mathilde Allard; Samia Abed Maillard; Nicole Montandon; Nathalie Rufer; Sophie Waldvogel; Mauro Delorenzi; Daniel E Speiser
Journal:  Sci Transl Med       Date:  2015-04-08       Impact factor: 17.956

3.  Repetitive antigen stimulation induces stepwise transcriptome diversification but preserves a core signature of memory CD8(+) T cell differentiation.

Authors:  Thomas C Wirth; Hai-Hui Xue; Deepa Rai; Jaime T Sabel; Tom Bair; John T Harty; Vladimir P Badovinac
Journal:  Immunity       Date:  2010-07-08       Impact factor: 31.745

4.  Factors influencing T-cell turnover in HIV-1-seropositive patients.

Authors:  J M McCune; M B Hanley; D Cesar; R Halvorsen; R Hoh; D Schmidt; E Wieder; S Deeks; S Siler; R Neese; M Hellerstein
Journal:  J Clin Invest       Date:  2000-03       Impact factor: 14.808

5.  Subpopulations of long-lived and short-lived T cells in advanced HIV-1 infection.

Authors:  Marc K Hellerstein; Rebecca A Hoh; Mary Beth Hanley; Denise Cesar; Daniel Lee; Richard A Neese; Joseph M McCune
Journal:  J Clin Invest       Date:  2003-09       Impact factor: 14.808

6.  Central memory CD8+ T cells appear to have a shorter lifespan and reduced abundance as a function of HIV disease progression.

Authors:  Kristin Ladell; Marc K Hellerstein; Denise Cesar; Robert Busch; Drina Boban; Joseph M McCune
Journal:  J Immunol       Date:  2008-06-15       Impact factor: 5.422

Review 7.  Lineage relationship of effector and memory T cells.

Authors:  Nicholas P Restifo; Luca Gattinoni
Journal:  Curr Opin Immunol       Date:  2013-10-20       Impact factor: 7.486

8.  A human memory T cell subset with stem cell-like properties.

Authors:  Luca Gattinoni; Enrico Lugli; Yun Ji; Zoltan Pos; Chrystal M Paulos; Máire F Quigley; Jorge R Almeida; Emma Gostick; Zhiya Yu; Carmine Carpenito; Ena Wang; Daniel C Douek; David A Price; Carl H June; Francesco M Marincola; Mario Roederer; Nicholas P Restifo
Journal:  Nat Med       Date:  2011-09-18       Impact factor: 53.440

9.  Regulation of DNA methylation dictates Cd4 expression during the development of helper and cytotoxic T cell lineages.

Authors:  MacLean Sellars; Jun R Huh; Kenneth Day; Priya D Issuree; Carolina Galan; Stephane Gobeil; Devin Absher; Michael R Green; Dan R Littman
Journal:  Nat Immunol       Date:  2015-06-01       Impact factor: 25.606

10.  Functional and genomic profiling of effector CD8 T cell subsets with distinct memory fates.

Authors:  Surojit Sarkar; Vandana Kalia; W Nicholas Haining; Bogumila T Konieczny; Shruti Subramaniam; Rafi Ahmed
Journal:  J Exp Med       Date:  2008-03-03       Impact factor: 14.307

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  166 in total

Review 1.  Remembering to remember: T cell memory maintenance and plasticity.

Authors:  Kyla D Omilusik; Ananda W Goldrath
Journal:  Curr Opin Immunol       Date:  2019-06-03       Impact factor: 7.486

Review 2.  Tissue-Specific Control of Tissue-Resident Memory T Cells.

Authors:  Yong Liu; Chaoyu Ma; Nu Zhang
Journal:  Crit Rev Immunol       Date:  2018       Impact factor: 2.214

Review 3.  Transcriptomic immune profiles of human flavivirus-specific T-cell responses.

Authors:  Alba Grifoni; Yuan Tian; Alessandro Sette; Daniela Weiskopf
Journal:  Immunology       Date:  2020-01-07       Impact factor: 7.397

Review 4.  Immunologic Control of HIV-1: What Have We Learned and Can We Induce It?

Authors:  Daniel C Rogan; Mark Connors
Journal:  Curr HIV/AIDS Rep       Date:  2021-03-11       Impact factor: 5.071

Review 5.  Epigenetics of T cell aging.

Authors:  Jörg J Goronzy; Bin Hu; Chulwoo Kim; Rohit R Jadhav; Cornelia M Weyand
Journal:  J Leukoc Biol       Date:  2018-06-27       Impact factor: 4.962

Review 6.  Integrating resident memory into T cell differentiation models.

Authors:  Pamela C Rosato; Sathi Wijeyesinghe; J Michael Stolley; David Masopust
Journal:  Curr Opin Immunol       Date:  2020-02-01       Impact factor: 7.486

Review 7.  Targeting innate immunity for tuberculosis vaccination.

Authors:  Shabaana A Khader; Maziar Divangahi; Willem Hanekom; Philip C Hill; Markus Maeurer; Karen W Makar; Katrin D Mayer-Barber; Musa M Mhlanga; Elisa Nemes; Larry S Schlesinger; Reinout van Crevel; Raman (Krishna) Vankayalapati; Ramnik J Xavier; Mihai G Netea
Journal:  J Clin Invest       Date:  2019-09-03       Impact factor: 14.808

8.  The Magnitude of IFN-γ Responses Is Fine-Tuned by DNA Architecture and the Non-coding Transcript of Ifng-as1.

Authors:  Franziska Petermann; Aleksandra Pękowska; Catrina A Johnson; Dragana Jankovic; Han-Yu Shih; Kan Jiang; William H Hudson; Stephen R Brooks; Hong-Wei Sun; Alejandro V Villarino; Chen Yao; Kentner Singleton; Rama S Akondy; Yuka Kanno; Alan Sher; Rafael Casellas; Rafi Ahmed; John J O'Shea
Journal:  Mol Cell       Date:  2019-07-31       Impact factor: 17.970

Review 9.  The role of systems biology approaches in determining molecular signatures for the development of more effective vaccines.

Authors:  Abdulmohammad Pezeshki; Inna G Ovsyannikova; Brett A McKinney; Gregory A Poland; Richard B Kennedy
Journal:  Expert Rev Vaccines       Date:  2019-02-11       Impact factor: 5.217

10.  T Cell Receptor Diversity and Lineage Relationship between Virus-Specific CD8 T Cell Subsets during Chronic Lymphocytic Choriomeningitis Virus Infection.

Authors:  Yun Min Chang; Andreas Wieland; Zheng-Rong Li; Se Jin Im; Donald J McGuire; Haydn T Kissick; Rustom Antia; Rafi Ahmed
Journal:  J Virol       Date:  2020-09-29       Impact factor: 5.103

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