Literature DB >> 30700167

The role of systems biology approaches in determining molecular signatures for the development of more effective vaccines.

Abdulmohammad Pezeshki1, Inna G Ovsyannikova1, Brett A McKinney2,3, Gregory A Poland1, Richard B Kennedy1.   

Abstract

INTRODUCTION: Emerging infectious diseases are a major threat to public health, and while vaccines have proven to be one of the most effective preventive measures for infectious diseases, we still do not have safe and effective vaccines against many human pathogens, and emerging diseases continually pose new threats. The purpose of this review is to discuss how the creation of vaccines for these new threats has been hindered by limitations in the current approach to vaccine development. Recent advances in high-throughput technologies have enabled scientists to apply systems biology approaches to collect and integrate increasingly large datasets that capture comprehensive biological changes induced by vaccines, and then decipher the complex immune response to those vaccines. AREAS COVERED: This review covers advances in these technologies and recent publications that describe systems biology approaches to understanding vaccine immune responses and to understanding the rational design of new vaccine candidates. EXPERT OPINION: Systems biology approaches to vaccine development provide novel information regarding both the immune response and the underlying mechanisms and can inform vaccine development.

Entities:  

Keywords:  Systems biology; gene expression profiling; genomics; immunology; proteomics; vaccination; vaccine development; vaccines; viral vaccines

Mesh:

Substances:

Year:  2019        PMID: 30700167      PMCID: PMC6613212          DOI: 10.1080/14760584.2019.1575208

Source DB:  PubMed          Journal:  Expert Rev Vaccines        ISSN: 1476-0584            Impact factor:   5.217


  142 in total

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Authors: 
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2.  Molecular organization of a recombinant subviral particle from tick-borne encephalitis virus.

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Journal:  Mol Cell       Date:  2001-03       Impact factor: 17.970

3.  Lethality and centrality in protein networks.

Authors:  H Jeong; S P Mason; A L Barabási; Z N Oltvai
Journal:  Nature       Date:  2001-05-03       Impact factor: 49.962

Review 4.  DNA microarray technology: devices, systems, and applications.

Authors:  Michael J Heller
Journal:  Annu Rev Biomed Eng       Date:  2002-03-22       Impact factor: 9.590

5.  Amplified RNA synthesized from limited quantities of heterogeneous cDNA.

Authors:  R N Van Gelder; M E von Zastrow; A Yool; W C Dement; J D Barchas; J H Eberwine
Journal:  Proc Natl Acad Sci U S A       Date:  1990-03       Impact factor: 11.205

6.  Conservation and evolution of gene coexpression networks in human and chimpanzee brains.

Authors:  Michael C Oldham; Steve Horvath; Daniel H Geschwind
Journal:  Proc Natl Acad Sci U S A       Date:  2006-11-13       Impact factor: 11.205

7.  Large-scale monitoring of host cell gene expression during HIV-1 infection using cDNA microarrays.

Authors:  G K Geiss; R E Bumgarner; M C An; M B Agy; A B van 't Wout; E Hammersmark; V S Carter; D Upchurch; J I Mullins; M G Katze
Journal:  Virology       Date:  2000-01-05       Impact factor: 3.616

8.  Common and divergent immune response signaling pathways discovered in peripheral blood mononuclear cell gene expression patterns in presymptomatic and clinically apparent malaria.

Authors:  Christian F Ockenhouse; Wan-chung Hu; Kent E Kester; James F Cummings; Ann Stewart; D Gray Heppner; Anne E Jedlicka; Alan L Scott; Nathan D Wolfe; Maryanne Vahey; Donald S Burke
Journal:  Infect Immun       Date:  2006-10       Impact factor: 3.441

9.  Generation of migratory antigen-specific plasma blasts and mobilization of resident plasma cells in a secondary immune response.

Authors:  Marcus Odendahl; Henrik Mei; Bimba F Hoyer; Annett M Jacobi; Arne Hansen; Gwendolin Muehlinghaus; Claudia Berek; Falk Hiepe; Rudi Manz; Andreas Radbruch; Thomas Dörner
Journal:  Blood       Date:  2004-10-26       Impact factor: 22.113

10.  Rapid cloning of high-affinity human monoclonal antibodies against influenza virus.

Authors:  Jens Wrammert; Kenneth Smith; Joe Miller; William A Langley; Kenneth Kokko; Christian Larsen; Nai-Ying Zheng; Israel Mays; Lori Garman; Christina Helms; Judith James; Gillian M Air; J Donald Capra; Rafi Ahmed; Patrick C Wilson
Journal:  Nature       Date:  2008-04-30       Impact factor: 49.962

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Review 2.  Emerging skin-targeted drug delivery strategies to engineer immunity: A focus on infectious diseases.

Authors:  Emrullah Korkmaz; Stephen C Balmert; Cara Donahue Carey; Geza Erdos; Louis D Falo
Journal:  Expert Opin Drug Deliv       Date:  2020-10-06       Impact factor: 8.129

3.  Editorial: Molecular Vaccines Against Pathogens in the Post-genomic Era.

Authors:  Angel Alejandro Oñate; Yanmin Wan; Alberto Moreno
Journal:  Front Cell Infect Microbiol       Date:  2020-01-22       Impact factor: 5.293

Review 4.  Mumps Outbreaks in Vaccinated Populations-Is It Time to Re-assess the Clinical Efficacy of Vaccines?

Authors:  Anna R Connell; Jeff Connell; T Ronan Leahy; Jaythoon Hassan
Journal:  Front Immunol       Date:  2020-09-18       Impact factor: 7.561

5.  Systematic characterization of human response to H1N1 influenza vaccination through the construction and integration of personalized transcriptome response profiles.

Authors:  Carlo De Intinis; Margherita Bodini; Denise Maffione; Laurane De Mot; Margherita Coccia; Duccio Medini; Emilio Siena
Journal:  Sci Rep       Date:  2021-10-21       Impact factor: 4.379

Review 6.  Vaccine-Induced Cellular Immunity against Bordetella pertussis: Harnessing Lessons from Animal and Human Studies to Improve Design and Testing of Novel Pertussis Vaccines.

Authors:  Anja Saso; Beate Kampmann; Sophie Roetynck
Journal:  Vaccines (Basel)       Date:  2021-08-07

Review 7.  Immunosenescence and human vaccine immune responses.

Authors:  Stephen N Crooke; Inna G Ovsyannikova; Gregory A Poland; Richard B Kennedy
Journal:  Immun Ageing       Date:  2019-09-13       Impact factor: 9.701

Review 8.  Systems Biology Approaches for Therapeutics Development Against COVID-19.

Authors:  Shweta Jaiswal; Mohit Kumar; Yogendra Singh; Pratyoosh Shukla
Journal:  Front Cell Infect Microbiol       Date:  2020-10-28       Impact factor: 5.293

9.  Direct Measurement of B Lymphocyte Gene Expression Biomarkers in Peripheral Blood Transcriptomics Enables Early Prediction of Vaccine Seroconversion.

Authors:  Dan Huang; Alex Y N Liu; Kwong-Sak Leung; Nelson L S Tang
Journal:  Genes (Basel)       Date:  2021-06-25       Impact factor: 4.096

  9 in total

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