Literature DB >> 29235382

Exploiting differential RNA splicing patterns: a potential new group of therapeutic targets in cancer.

Nidhi Jyotsana1, Michael Heuser1.   

Abstract

INTRODUCTION: Mutations in genes associated with splicing have been found in hematologic malignancies, but also in solid cancers. Aberrant cancer specific RNA splicing either results from mutations or misexpression of the spliceosome genes directly, or from mutations in splice sites of oncogenes or tumor suppressors. Areas covered: In this review, we present molecular targets of aberrant splicing in various malignancies, information on existing and emerging therapeutics against such targets, and strategies for future drug development. Expert opinion: Alternative splicing is an important mechanism that controls gene expression, and hence pharmacologic and genetic control of aberrant alternative RNA splicing has been proposed as a potential therapy in cancer. To identify and validate aberrant RNA splicing patterns as therapeutic targets we need to (1) characterize the most common genetic aberrations of the spliceosome and of splice sites, (2) understand the dysregulated downstream pathways and (3) exploit in-vivo disease models of aberrant splicing. Antisense oligonucleotides show promising activity, but will benefit from improved delivery tools. Inhibitors of mutated splicing factors require improved specificity, as alternative and aberrant splicing are often intertwined like two sides of the same coin. In summary, targeting aberrant splicing is an early but emerging field in cancer treatment.

Entities:  

Keywords:  Alternative splicing; anti-sense oligonucleotides; cancer; small molecule inhibitors; spliceosome; therapeutics

Mesh:

Substances:

Year:  2017        PMID: 29235382      PMCID: PMC7116745          DOI: 10.1080/14728222.2018.1417390

Source DB:  PubMed          Journal:  Expert Opin Ther Targets        ISSN: 1472-8222            Impact factor:   6.902


  165 in total

Review 1.  Pre-mRNA splicing: awash in a sea of proteins.

Authors:  Melissa S Jurica; Melissa J Moore
Journal:  Mol Cell       Date:  2003-07       Impact factor: 17.970

Review 2.  The pathogenicity of splicing defects: mechanistic insights into pre-mRNA processing inform novel therapeutic approaches.

Authors:  Elisabeth Daguenet; Gwendal Dujardin; Juan Valcárcel
Journal:  EMBO Rep       Date:  2015-11-13       Impact factor: 8.807

3.  Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing.

Authors:  Qun Pan; Ofer Shai; Leo J Lee; Brendan J Frey; Benjamin J Blencowe
Journal:  Nat Genet       Date:  2008-11-02       Impact factor: 38.330

4.  Nucleosome positioning as a determinant of exon recognition.

Authors:  Hagen Tilgner; Christoforos Nikolaou; Sonja Althammer; Michael Sammeth; Miguel Beato; Juan Valcárcel; Roderic Guigó
Journal:  Nat Struct Mol Biol       Date:  2009-09       Impact factor: 15.369

5.  Convergence of Acquired Mutations and Alternative Splicing of CD19 Enables Resistance to CART-19 Immunotherapy.

Authors:  Elena Sotillo; David M Barrett; Kathryn L Black; Asen Bagashev; Derek Oldridge; Glendon Wu; Robyn Sussman; Claudia Lanauze; Marco Ruella; Matthew R Gazzara; Nicole M Martinez; Colleen T Harrington; Elaine Y Chung; Jessica Perazzelli; Ted J Hofmann; Shannon L Maude; Pichai Raman; Alejandro Barrera; Saar Gill; Simon F Lacey; Jan J Melenhorst; David Allman; Elad Jacoby; Terry Fry; Crystal Mackall; Yoseph Barash; Kristen W Lynch; John M Maris; Stephan A Grupp; Andrei Thomas-Tikhonenko
Journal:  Cancer Discov       Date:  2015-10-29       Impact factor: 39.397

6.  SRSF2 Is Essential for Hematopoiesis, and Its Myelodysplastic Syndrome-Related Mutations Dysregulate Alternative Pre-mRNA Splicing.

Authors:  Yukiko Komeno; Yi-Jou Huang; Jinsong Qiu; Leo Lin; YiJun Xu; Yu Zhou; Liang Chen; Dora D Monterroza; Hairi Li; Russell C DeKelver; Ming Yan; Xiang-Dong Fu; Dong-Er Zhang
Journal:  Mol Cell Biol       Date:  2015-06-29       Impact factor: 4.272

7.  M2 isoform of pyruvate kinase is dispensable for tumor maintenance and growth.

Authors:  Marta Cortés-Cros; Christelle Hemmerlin; Stephane Ferretti; Juan Zhang; John S Gounarides; Hong Yin; Alban Muller; Anne Haberkorn; Patrick Chene; William R Sellers; Francesco Hofmann
Journal:  Proc Natl Acad Sci U S A       Date:  2012-12-24       Impact factor: 11.205

8.  Gemcitabine triggers a pro-survival response in pancreatic cancer cells through activation of the MNK2/eIF4E pathway.

Authors:  L Adesso; S Calabretta; F Barbagallo; G Capurso; E Pilozzi; R Geremia; G Delle Fave; C Sette
Journal:  Oncogene       Date:  2012-07-16       Impact factor: 9.867

9.  Serine-arginine protein kinase 1 (SRPK1) inhibition as a potential novel targeted therapeutic strategy in prostate cancer.

Authors:  A Mavrou; K Brakspear; M Hamdollah-Zadeh; G Damodaran; R Babaei-Jadidi; J Oxley; D A Gillatt; M R Ladomery; S J Harper; D O Bates; S Oltean
Journal:  Oncogene       Date:  2014-11-10       Impact factor: 9.867

10.  Evaluation of PacBio sequencing for full-length bacterial 16S rRNA gene classification.

Authors:  Josef Wagner; Paul Coupland; Hilary P Browne; Trevor D Lawley; Suzanna C Francis; Julian Parkhill
Journal:  BMC Microbiol       Date:  2016-11-14       Impact factor: 3.605

View more
  16 in total

1.  Lipid nanoparticle-mediated siRNA delivery for safe targeting of human CML in vivo.

Authors:  Nidhi Jyotsana; Amit Sharma; Anuhar Chaturvedi; Ramachandramouli Budida; Michaela Scherr; Florian Kuchenbauer; Robert Lindner; Fatih Noyan; Kurt-Wolfram Sühs; Martin Stangel; Denis Grote-Koska; Korbinian Brand; Hans-Peter Vornlocher; Matthias Eder; Felicitas Thol; Arnold Ganser; R Keith Humphries; Euan Ramsay; Pieter Cullis; Michael Heuser
Journal:  Ann Hematol       Date:  2019-05-18       Impact factor: 3.673

Review 2.  Alternative Splicing of ALS Genes: Misregulation and Potential Therapies.

Authors:  Benedetta Perrone; Valentina La Cognata; Teresa Sprovieri; Carmine Ungaro; Francesca Luisa Conforti; Sebastiano Andò; Sebastiano Cavallaro
Journal:  Cell Mol Neurobiol       Date:  2019-08-05       Impact factor: 5.046

3.  Genome-wide profiling of prognosis-related alternative splicing signatures in sarcoma.

Authors:  Weifeng Hong; Weicong Zhang; Renguo Guan; Yuying Liang; Shixiong Hu; Yayun Ji; Mouyuan Liu; Hai Lu; Min Yu; Liheng Ma
Journal:  Ann Transl Med       Date:  2019-10

4.  Integrative bioinformatics analysis of prognostic alternative splicing signatures in gastric cancer.

Authors:  Zhen Zong; Hui Li; Zhikun Ning; Cegui Hu; Fuxin Tang; Xiaojian Zhu; Huakai Tian; Taicheng Zhou; He Wang
Journal:  J Gastrointest Oncol       Date:  2020-08

5.  Genome-Wide Profiling of Prognostic Alternative Splicing Signature in Colorectal Cancer.

Authors:  Zhen Zong; Hui Li; Chenghao Yi; Houqun Ying; Zhengming Zhu; He Wang
Journal:  Front Oncol       Date:  2018-11-20       Impact factor: 6.244

6.  FAK alternative splice mRNA variants expression pattern in colorectal cancer.

Authors:  Christel Devaud; Anne-Françoise Tilkin-Mariamé; Alix Vignolle-Vidoni; Philippine Souleres; Alexandre Denadai-Souza; Corinne Rolland; Christine Duthoit; Catherine Blanpied; Sophie Chabot; Pascale Bouillé; Philippe Lluel; Nathalie Vergnolle; Claire Racaud-Sultan; Audrey Ferrand
Journal:  Int J Cancer       Date:  2019-02-14       Impact factor: 7.396

7.  Splicing modulation as novel therapeutic strategy against diffuse malignant peritoneal mesothelioma.

Authors:  Rocco Sciarrillo; Anna Wojtuszkiewicz; Btissame El Hassouni; Niccola Funel; Paolo Gandellini; Tonny Lagerweij; Silvia Buonamici; Maxime Blijlevens; Eveline A Zeeuw van der Laan; Nadia Zaffaroni; Marcello Deraco; Shigeki Kusamura; Tom Würdinger; Godefridus J Peters; Carla F M Molthoff; Gerrit Jansen; Gertjan J L Kaspers; Jacqueline Cloos; Elisa Giovannetti
Journal:  EBioMedicine       Date:  2018-12-20       Impact factor: 8.143

8.  Comprehensive analysis of prognostic alternative splicing signature in cervical cancer.

Authors:  Dong Ouyang; Ping Yang; Jing Cai; Si Sun; Zehua Wang
Journal:  Cancer Cell Int       Date:  2020-06-08       Impact factor: 5.722

9.  Broad regulation of gene isoform expression by Wnt signaling in cancer.

Authors:  Muhammad Idris; Nathan Harmston; Enrico Petretto; Babita Madan; David M Virshup
Journal:  RNA       Date:  2019-09-10       Impact factor: 4.942

10.  Dysregulation of the splicing machinery is directly associated to aggressiveness of prostate cancer.

Authors:  Juan M Jiménez-Vacas; Vicente Herrero-Aguayo; Antonio J Montero-Hidalgo; Enrique Gómez-Gómez; Antonio C Fuentes-Fayos; Antonio J León-González; Prudencio Sáez-Martínez; Emilia Alors-Pérez; Sergio Pedraza-Arévalo; Teresa González-Serrano; Oscar Reyes; Ana Martínez-López; Rafael Sánchez-Sánchez; Sebastián Ventura; Elena M Yubero-Serrano; María J Requena-Tapia; Justo P Castaño; Manuel D Gahete; Raúl M Luque
Journal:  EBioMedicine       Date:  2020-01-03       Impact factor: 8.143

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.