| Literature DB >> 29228744 |
Yaqin Tu1, Guorun Fan1, Tianshu Zeng2, Xiong Cai3, Wen Kong2.
Abstract
Graves' disease (GD) is a common autoimmune disorder with a genetic predisposition. There is strong evidence to suggest that both Th1 and Th2 circulating cytokines are involved in the development of GD. In this study, we conducted a meta-analysis to assess the impact of seven variations of five IL-related genes on the susceptibility to GD. A total of 22 case-control studies involving 5338 GD patients and 6446 healthy controls were included. The results showed that only one SNP rs1800795 in IL-6 was significantly associated with GD in homozygous model (CC vs. GG: OR = 2.714, 95% CI = 1.047-7.039, p = 0.04), heterozygous model (CG vs. GG: OR = 1.295, 95% CI = 1.013-1.655, p = 0.039), dominant model (CC+CG vs. GG: OR = 1.418, 95% CI = 1.122-1.793, p = 0.003) and additive model (C vs. G: OR = 1.432, 95% CI = 1.087-1.886, p = 0.011).To explain the heterogeneity, we performed the subgroup analysis by ethnicity. The ethnicity stratification revealed that the association between rs1800795 and GD tended to be much stronger for Asian than European population in homozygous, dominant, recessive, and additive models. The remaining 6 SNPs in 4 genes did not show any significant association with GD in any genetic models. Together, our data support that rs1800795 within the IL-6 gene confers genetic susceptibility for GD. Future large-scale studies are required to validate the associations between IL-6 and others IL-related genes and GD.Entities:
Keywords: Graves’ disease; case/control study; interleukin; polymorphism; susceptibility
Year: 2017 PMID: 29228744 PMCID: PMC5716784 DOI: 10.18632/oncotarget.20114
Source DB: PubMed Journal: Oncotarget ISSN: 1949-2553
Figure 1PRISMA flow diagram showing the search strategy
Characteristic of datasets included for meta-analysis
| ID | Author | Year | Ethnicity | Genotyping method | Study design | Gene | Case/Control | SNP loci | GD | Control | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 11 | 12 | 22 | 11 | 12 | 22 | ||||||||||
| 1 | Jung-Pil Jang | 2016 | Asian | hybridization | CC | IL-13 | 60/192 | rs1800925 | 36 | 24 | 0 | 129 | 61 | 2 | 0.07 |
| 2 | Duraes | 2014 | European | Taqman | CC | IL-6 | 111/735 | rs1800795 | 13 | 61 | 37 | 92 | 324 | 319 | 0.5 |
| 3 | Faruk Kutluturk | 2013 | European | PCR-SSP | CC | IL-6 | 100/124 | rs1800795 | 12 | 36 | 52 | 6 | 41 | 77 | 0.86 |
| 4 | Yann-Jinn Lee | 2011 | Asian | Taqman | CC | IL-4 | 220/904 | rs2243250 | 9 | 64 | 147 | 38 | 255 | 611 | 0.087 |
| 5 | N. Inoue | 2011 | Asian | PCR-RFLP | CC | IL-13 | 78/68 | rs1800925 | 60 | 16 | 2 | 53 | 14 | 1 | 0.95 |
| 6 | Nan Liu | 2011 | Asian | GenomeLab SNPstream | CC | IL-10 | 725/696 | rs1800872 | 321 | 326 | 78 | 299 | 310 | 87 | 0.63 |
| 7 | Omid Khalilzadeh | 2010 | Asian | PCR-SSP | CC | IL-4 | 107/139 | rs2243250 | 50 | 52 | 5 | 10 | 129 | 0 | |
| 107/139 | rs2070874 | 29 | 50 | 28 | 61 | 78 | 0 | ||||||||
| 8 | W, Zhu | 2010 | Asian | GenomeLab SNPstream | CC | IL-4 | 731/716 | rs2070874 | 453 | 253 | 25 | 461 | 231 | 24 | 0.45 |
| 9 | Mehdi Anvari | 2010 | Asian | PCR-SSP | CC | IL-6 | 107/139 | rs1800795 | 27 | 63 | 17 | 4 | 93 | 42 | |
| IL-12 | 107/140 | rs3212227 | 34 | 53 | 20 | 72 | 60 | 8 | 0.32 | ||||||
| 10 | Kelvin K. L. Chong | 2008 | Asian | PCR-RFLP | CC | IL-13 | 177/151 | rs1800925 | 120 | 51 | 6 | 106 | 44 | 1 | 0.11 |
| rs20541 | 68 | 81 | 28 | 66 | 67 | 18 | 0.87 | ||||||||
| 11 | Nanba | 2008 | Asian | Sequencing | CC | IL-4 | 50/26 | rs2243250 | 4 | 22 | 24 | 2 | 11 | 13 | 0.88 |
| 12 | Rong-Hsing Chen | 2007 | Asian | GenomeLab SNPstream | CC | IL-4 | 104/105 | rs2243250 | 4 | 32 | 68 | 2 | 36 | 67 | 0.25 |
| 13 | Ming-Yuh Shiau | 2007 | Asian | PCR-RFLP | CC | IL-10 | 133/134 | rs1800872 | 62 | 54 | 17 | 72 | 52 | 10 | 0.89 |
| IL-4 | 130/101 | rs2070874 | 93 | 34 | 3 | 68 | 31 | 2 | 0.47 | ||||||
| 137/119 | rs2243250 | 6 | 48 | 83 | 6 | 35 | 78 | 0.43 | |||||||
| 14 | Yuji Hiromatsu | 2006 | Asian | Sequencing | CC | IL-12 | 329/226 | rs3212227 | 77 | 162 | 90 | 39 | 120 | 67 | 0.24 |
| 15 | Yang | 2005 | Asian | Sequencing | CC | IL-4 | 187/131 | rs2243250 | 7 | 51 | 129 | 2 | 46 | 83 | 0.12 |
| 16 | Yukio Ikeda | 2004 | Asian | PCR-RFLP | CC | IL-12 | 90/123 | rs3212227 | 22 | 39 | 29 | 29 | 64 | 30 | 0.65 |
| 17 | Yuji Hiromatsu | 2004 | Asian | PCR-RFLP | CC | IL-13 | 310/244 | rs1800925 | 219 | 83 | 8 | 143 | 88 | 13 | 0.91 |
| rs20541 | 166 | 123 | 21 | 113 | 100 | 31 | 0.24 | ||||||||
| 18 | Bednarczuk, T | 2004 | Asian | PCR-RFLP | CC | IL-6 | 279/186 | rs1800795 | 56 | 138 | 85 | 27 | 101 | 58 | 0.11 |
| 19 | Karen F, Tait | 2004 | European | Invader assay | CC | IL-10 | 630/846 | rs1800872 | 32 | 234 | 364 | 35 | 290 | 521 | 0.50 |
| 20 | Tomasz Bednarczuk | 2003 | European | SSCP | CC | IL-13 | 261/168 | rs1800925 | 127 | 108 | 26 | 89 | 63 | 16 | 0.33 |
| rs20541 | 148 | 94 | 19 | 94 | 66 | 8 | 0.40 | ||||||||
| 21 | Heward | 2001 | European | PCR-RFLP | CC | IL-4 | 381/285 | rs2243250 | 277 | 99 | 5 | 222 | 58 | 5 | 0.59 |
| 22 | Hunt | 2000 | European | PCR-SSP | CC | IL-4 | 138/101 | rs2243250 | 122 | 15 | 1 | 75 | 23 | 3 | 0.46 |
11: wild-type homozygote, 12: heterozygote, 22: variant homozygote.
CC: case/control.
HWE: Hardy-Weinberg equilibrium.
PCR-SSCP: PCR-single-strand conformation polymorphism.
PCR-SSP: PCR-sequence specific primer.
Quality assessments of case-control studies according to the Newcastle Ottawa Scale
| Study ID | Author | Year | Selection | Comparability | Exposure | Total score | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a | b | c | d | e | f | g | h | i | ||||
| 1 | Jung-Pil Jang | 2016 | * | * | / | / | * | * | * | * | * | 7 |
| 2 | Duraes | 2014 | * | * | / | * | * | * | * | * | * | 8 |
| 3 | Faruk Kutluturk | 2013 | * | * | / | * | * | * | * | * | * | 8 |
| 4 | Yann-Jinn Lee | 2011 | * | * | / | * | * | * | * | * | * | 8 |
| 5 | N. Inoue | 2011 | * | * | / | / | * | * | * | * | * | 7 |
| 6 | Nan Liu | 2011 | * | * | / | * | * | * | * | * | * | 8 |
| 7 | Omid Khalilzadeh | 2010 | * | * | / | * | * | / | * | * | * | 7 |
| 8 | W, Zhu | 2010 | * | * | / | * | * | * | * | * | * | 8 |
| 9 | Mehdi Anvari | 2010 | * | * | / | * | * | / | * | * | * | 7 |
| 10 | Kelvin K. L. Chong | 2008 | * | * | / | * | * | * | * | * | * | 8 |
| 11 | Nanba | 2008 | * | * | / | / | * | * | * | * | * | 7 |
| 12 | Rong-Hsing Chen | 2007 | * | * | / | * | * | * | * | * | * | 8 |
| 13 | Ming-Yuh Shiau | 2007 | * | * | / | / | * | * | * | * | * | 7 |
| 14 | Yuji Hiromatsu | 2006 | * | * | / | * | * | * | * | * | * | 8 |
| 15 | Yang | 2005 | * | * | / | * | * | / | * | * | * | |
| 16 | Yukio Ikeda | 2004 | * | * | / | * | * | * | * | * | * | 8 |
| 17 | Yuji Hiromatsu | 2004 | * | * | / | * | * | * | * | * | * | 8 |
| 18 | Bednarczuk, T | 2004 | * | * | / | / | * | * | * | * | * | 7 |
| 19 | Karen F, Tait | 2004 | * | * | / | * | * | / | * | * | * | 7 |
| 20 | Tomasz Bednarczuk | 2003 | * | * | / | / | * | * | * | * | * | 7 |
| 21 | Heward | 2001 | * | * | / | * | * | / | * | * | * | 7 |
| 22 | Hunt | 2000 | * | * | / | * | * | / | * | * | * | 7 |
Publication quality check list:
a: Is the case definition adequate?;
b: Representativeness of the cases;
c: Selection of Controls;
d: Definition of Controls;
e: study controls for ethnicity;
f: study controls for any additional factor;
g: Ascertainment of exposure;
h: Same method of ascertainment for cases and controls;
i: Non-Response rate.
Figure 2Forest plot for the association between IL-6 rs1800795 polymorphism and Graves’ disease
(A) homozygous model (CC vs. GG), (B) heterozygous model (CG vs. GG), (C) dominant model (CC+CG vs. GG), (D) additive model (C vs. G).
Results for meta-analysis of polymorphism within Interleukin related genes with Graves’ disease risk
| Gene | Polymorphism | No. of datasets | Ethnicity | Genetic model | OR(95% CI) | Test of heterogeneity | |||
|---|---|---|---|---|---|---|---|---|---|
| I2 | |||||||||
| IL-4 | rs2243250 | 8 | Asian, European | CC vs. TT | 1.225 (0.777, 1.931) | 0.382 | 0% | 0.86 | 0.308 |
| CT vs. TT | 0.959 (0.776, 1.184) | 0.695 | 21.8% | 0.256 | 0.629 | ||||
| CC+CT vs. TT | 0.988 (0.806, 1.211) | 0.905 | 0% | 0.431 | 0.872 | ||||
| CC vs. CT+TT | 1.800 (0.814, 3.981) | 0.147 | 85.2% | 0.000 | 0.378 | ||||
| C vs. T | 1.188 (0.906, 1.557) | 0.213 | 69.8% | 0.002 | 0.392 | ||||
| IL-4 | rs2070874 | 3 | Asian, European | CC vs. TT | 0.261 (0.02,3.366) | 0.303 | 86.2% | 0.001 | 0.451 |
| CT vs. TT | 0.273 (0.022,3.4710 | 0.317 | 85.7% | 0.001 | 0.386 | ||||
| CC+CT vs. TT | 0.269 (0.02,3.551) | 0.319 | 86.6% | 0.001 | 0.430 | ||||
| CC vs. CT+TT | 0.871 (0.526,1.27) | 0.369 | 68.0% | 0.044 | 0.810 | ||||
| C vs. T | 0.747 (0.416,1.342) | 0.330 | 88.8% | 0.000 | 0.763 | ||||
| IL-6 | rs1800795 | 4 | Asian, European | CC vs. GG | 2.714 (1.047, 7.039) | 0.04 | 81.6% | 0.01 | 0.117 |
| CG vs. GG | 1.295 (1.013, 1.655) | 0.039 | 24.4% | 0.265 | 0.541 | ||||
| CC+CG vs. GG | 1.418 (1.122, 1.793) | 0.003 | 37.2% | 0.189 | 0.178 | ||||
| CC vs. CG+GG | 2.305 (0.947, 5.613) | 0.066 | 82.1% | 0.001 | 0.221 | ||||
| C vs. G | 1.432 (1.087, 1.886) | 0.011 | 64.3% | 0.038 | 0.228 | ||||
| IL-10 | rs1800872 | 3 | Asian, European | AA vs. CC | 1.123 (0.86,1.467) | 0.394 | 48.1% | 0.146 | 0.388 |
| AC vs. CC | 1.127 (0.942,1.35) | 0.191 | 40% | 0.366 | 0.299 | ||||
| AA+AC vs. CC | 1.135 (0.955,1.348) | 0.15 | 36.3% | 0.208 | 0.280 | ||||
| AA vs. AC+CC | 1.028 (0.86,1.23) | 0.761 | 10.8% | 0.326 | 0.816 | ||||
| A vs. C | 1.065 (0.953,1.19) | 0.265 | 53.3% | 0.117 | 0.276 | ||||
| IL-12 | rs3212227 | 3 | Asian | CC vs. AA | 0.634 (0.206,1.949) | 0.427 | 86.7% | 0.001 | 0.2114 |
| CA vs. AA | 0.677 (0.384,1.193) | 0.177 | 59.8% | 0.083 | 0.039 | ||||
| CC+CA vs. AA | 0.636 (0.3,1.348) | 0.237 | 79.3% | 0.008 | 0.095 | ||||
| CC vs. CA+A | 0.883 (0.417,1.869) | 0.744 | 83.7% | 0.002 | 0.729 | ||||
| C vs. A | 0.804 (0.473,1.367) | 0.421 | 87.0% | 0.000 | 0.388 | ||||
| IL-13 | rs1800925 | 5 | Asian, European | TT vs. CC | 1.056 (0.652,1.712) | 0.824 | 38% | 0.164 | 0.595 |
| TC vs. CC | 1.018 (0.616,1.68) | 0.946 | 0% | 0.489 | 0.471 | ||||
| TT+TC vs. CC | 1.055 (0.656,1694) | 0.826 | 23.8% | 0.263 | 0.556 | ||||
| TT vs. TC+CC | 1.009 (0.712,1.429) | 0.961 | 61.1% | 0.036 | 0.363 | ||||
| T vs. C | 1.005 (0.739,1.367) | 0.974 | 63.9% | 0.026 | 0.438 | ||||
| IL-13 | rs20541 | 3 | Asian, European | AA vs. GG | 1.014 (0.44,2.337) | 0.973 | 75.9% | 0.016 | 0.467 |
| AG vs. GG | 0.991 (0.504,1.949) | 0.978 | 62.7% | 0.068 | 0.406 | ||||
| AA+AG vs. GG | 1.006 (0.473,2.14) | 0.987 | 72.9% | 0.025 | 0.499 | ||||
| AA vs. AG+GG | 1.083 (0.869,1.35) | 0.476 | 39.7% | 0.19 | 0.005 | ||||
| A vs. G | 1.036 (0.756,1.418) | 0.828 | 70% | 0.036 | 0.146 | ||||
a:Egger’s test was performed to assess publication bias.
Figure 3Funnel plot analysis to detect publication bias (SNP rs1800795 in IL-6)
Each point represents a separate study for the indicated association. (A) homozygous model (CC vs. GG), (B) heterozygous model (CG vs. GG), (C) dominant model (CC+CG vs. GG), (D) additive model (C vs. G).