Literature DB >> 29226352

Tutorial on kernel estimation of continuous spatial and spatiotemporal relative risk.

Tilman M Davies1, Jonathan C Marshall2, Martin L Hazelton2.   

Abstract

Kernel smoothing is a highly flexible and popular approach for estimation of probability density and intensity functions of continuous spatial data. In this role, it also forms an integral part of estimation of functionals such as the density-ratio or "relative risk" surface. Originally developed with the epidemiological motivation of examining fluctuations in disease risk based on samples of cases and controls collected over a given geographical region, such functions have also been successfully used across a diverse range of disciplines where a relative comparison of spatial density functions has been of interest. This versatility has demanded ongoing developments and improvements to the relevant methodology, including use spatially adaptive smoothers; tests of significantly elevated risk based on asymptotic theory; extension to the spatiotemporal domain; and novel computational methods for their evaluation. In this tutorial paper, we review the current methodology, including the most recent developments in estimation, computation, and inference. All techniques are implemented in the new software package sparr, publicly available for the R language, and we illustrate its use with a pair of epidemiological examples.
Copyright © 2017 John Wiley & Sons, Ltd.

Keywords:  adaptive bandwidth; geographical epidemiology; kernel density estimation; spatial point pattern; tolerance contours

Mesh:

Year:  2017        PMID: 29226352     DOI: 10.1002/sim.7577

Source DB:  PubMed          Journal:  Stat Med        ISSN: 0277-6715            Impact factor:   2.373


  15 in total

1.  Spatial Distribution of Plasmodium falciparum and Plasmodium vivax in Northern Ethiopia by Microscopic, Rapid Diagnostic Test, Laboratory Antibody, and Antigen Data.

Authors:  Colleen M Leonard; Ashenafi Assefa; Heven Sime; Hussein Mohammed; Amha Kebede; Hiwot Solomon; Chris Drakeley; Matt Murphy; Jimee Hwang; Eric Rogier
Journal:  J Infect Dis       Date:  2022-03-02       Impact factor: 5.226

2.  Aggregated spatial intensity as a method for estimating point-level exposures within area-level units: The case of tobacco retailer exposure in census tracts.

Authors:  Madeline M Brooks; Scott D Siegel; Anne E Corrigan; Frank C Curriero
Journal:  Spat Spatiotemporal Epidemiol       Date:  2022-01-21

3.  A Population Health Assessment in a Community Cancer Center Catchment Area: Triple-Negative Breast Cancer, Alcohol Use, and Obesity in New Castle County, Delaware.

Authors:  Scott D Siegel; Madeline M Brooks; Jennifer Sims-Mourtada; Zachary T Schug; Dawn J Leonard; Nicholas Petrelli; Frank C Curriero
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2021-11-04       Impact factor: 4.090

4.  Characterizing the spatial relationship between smoking status and tobacco retail exposure: Implications for policy development and evaluation.

Authors:  Madeline M Brooks; Scott D Siegel; Frank C Curriero
Journal:  Health Place       Date:  2021-02-17       Impact factor: 4.078

5.  Spatiotemporal distribution of a non-haematophagous bat community and rabies virus circulation: a proposal for urban rabies surveillance in Brazil.

Authors:  R A Dias; F Rocha; F M Ulloa-Stanojlovic; A Nitsche; C Castagna; T de Lucca; R C A Rodrigues
Journal:  Epidemiol Infect       Date:  2019-01       Impact factor: 2.451

6.  Spatial Analysis of a Cat-Borne Disease Reveals That Soil pH and Clay Content Are Risk Factors for Sarcocystosis in Sheep.

Authors:  Patrick L Taggart; Mark A Stevenson; Simon M Firestone; Milton M McAllister; Charles G B Caraguel
Journal:  Front Vet Sci       Date:  2019-04-24

7.  Choosing interventions to eliminate forest malaria: preliminary results of two operational research studies inside Cambodian forests.

Authors:  Amber Kunkel; Chea Nguon; Sophea Iv; Srean Chhim; Dom Peov; Phanith Kong; Saorin Kim; Sarun Im; Mark Debackere; Nimol Khim; Jean Popovici; Sreynet Srun; Amélie Vantaux; Jean-Olivier Guintran; Benoit Witkowski; Patrice Piola
Journal:  Malar J       Date:  2021-01-20       Impact factor: 2.979

8.  Distribution and prevalence of ticks and tick-borne disease on sheep and cattle farms in Great Britain.

Authors:  Katie Lihou; Hannah Rose Vineer; Richard Wall
Journal:  Parasit Vectors       Date:  2020-08-10       Impact factor: 3.876

9.  Monitoring of Pseudorabies in Wild Boar of Germany-A Spatiotemporal Analysis.

Authors:  Nicolai Denzin; Franz J Conraths; Thomas C Mettenleiter; Conrad M Freuling; Thomas Müller
Journal:  Pathogens       Date:  2020-04-10

10.  Overcoming inefficiencies arising due to the impact of the modifiable areal unit problem on single-aggregation disease maps.

Authors:  Matthew Tuson; Matthew Yap; Mei Ruu Kok; Bryan Boruff; Kevin Murray; Alistair Vickery; Berwin A Turlach; David Whyatt
Journal:  Int J Health Geogr       Date:  2020-10-03       Impact factor: 3.918

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