Literature DB >> 29225410

Conformational Differentiation of α-Cyanohydroxycinnamic Acid Isomers: A Raman Spectroscopic Study.

Jayson Vedad1, Maciej E Domaradzki1, Elmer-Rico E Mojica1, Emmanuel J Chang1, Adam A Profit1, Ruel Z B Desamero1.   

Abstract

Two α-cyanohydroxycinnamic acid positional isomers, α-cyano-4-hydroxycinnamic acid (CHCA4) and α-cyano-3-hydroxycinnamic acid (CHCA3), were characterized using Raman spectroscopy. We analyzed the implications of the collected Raman spectral shifts, and verified them through other spectroscopic techniques, to arrive at plausible three dimensional structures of CHCA3 and CHCA4. The positions of these groups were mapped by systematically analyzing the orientation and type of interactions functional groups make in each CHCA isomer. We determined whether or not the carboxylic moieties are forming dimeric links and ascertained the existence of ring-ring π-stacking interactions. We also assessed the nature of the hydrogen bonding between -CN and -OH groups. The results were then taken together to model plausible three dimensional structures for each compound. The data revealed a structure for CHCA4 that matches the published x-ray crystallographic structure. We then applied the same spectral analysis to CHCA3 to reveal its plausible three dimensional structure. The structural details revealed may account for the functional properties of the two α-cyanohydroxycinnamic acid positional isomers.

Entities:  

Year:  2017        PMID: 29225410      PMCID: PMC5720387          DOI: 10.1002/jrs.5209

Source DB:  PubMed          Journal:  J Raman Spectrosc        ISSN: 0377-0486            Impact factor:   3.133


  26 in total

1.  Vibrational analysis of α-cyanohydroxycinnamic acid.

Authors:  Elmer-Rico E Mojica; Jayson Vedad; Ruel Z B Desamero
Journal:  J Mol Struct       Date:  2015-08-15       Impact factor: 3.196

2.  Confocal Fluorescence Microscopic Imaging for Investigating the Analyte Distribution in MALDI Matrices.

Authors:  Y Dai; R M Whittal; L Li
Journal:  Anal Chem       Date:  1996-08-01       Impact factor: 6.986

3.  A spectroscopic study of the cis/trans-isomers of penta-2,4-dienoic acid attached to gold nanoclusters.

Authors:  Federico Latorre; Julien Guthmuller; Philipp Marquetand
Journal:  Phys Chem Chem Phys       Date:  2015-03-28       Impact factor: 3.676

4.  Aromaticity and amyloid formation: effect of π-electron distribution and aryl substituent geometry on the self-assembly of peptides derived from hIAPP(22-29).

Authors:  Adam A Profit; Jayson Vedad; Mohamad Saleh; Ruel Z B Desamero
Journal:  Arch Biochem Biophys       Date:  2014-12-15       Impact factor: 4.013

5.  A binary matrix for background suppression in MALDI-MS of small molecules.

Authors:  Zhong Guo; Lin He
Journal:  Anal Bioanal Chem       Date:  2007-01-27       Impact factor: 4.142

6.  FT-IR, FT-Raman, NMR and UV-vis spectra, vibrational assignments and DFT calculations of 4-butyl benzoic acid.

Authors:  M Karabacak; Z Cinar; M Kurt; S Sudha; N Sundaraganesan
Journal:  Spectrochim Acta A Mol Biomol Spectrosc       Date:  2011-10-05       Impact factor: 4.098

7.  Evidence of π-stacking interactions in the self-assembly of hIAPP(22-29).

Authors:  Adam A Profit; Valentina Felsen; Justina Chinwong; Elmer-Rico E Mojica; Ruel Z B Desamero
Journal:  Proteins       Date:  2013-01-15

8.  Fluorescence emissions of imide compounds and end-capped polyimides enhanced by intramolecular double hydrogen bonds.

Authors:  Kenta Kanosue; Shinji Ando
Journal:  Phys Chem Chem Phys       Date:  2015-11-11       Impact factor: 3.676

9.  4-Chloro-alpha-cyanocinnamic acid is an advanced, rationally designed MALDI matrix.

Authors:  Thorsten W Jaskolla; Wolf-Dieter Lehmann; Michael Karas
Journal:  Proc Natl Acad Sci U S A       Date:  2008-08-22       Impact factor: 11.205

10.  Cinnamic acid derivatives as matrices for ultraviolet laser desorption mass spectrometry of proteins.

Authors:  R C Beavis; B T Chait
Journal:  Rapid Commun Mass Spectrom       Date:  1989-12       Impact factor: 2.419

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