Literature DB >> 29220020

Microbial synthesis of medium-chain chemicals from renewables.

Stephen Sarria1, Nicholas S Kruyer2,3, Pamela Peralta-Yahya1,2,3.   

Abstract

Linear, medium-chain (C8-C12) hydrocarbons are important components of fuels as well as commodity and specialty chemicals. As industrial microbes do not contain pathways to produce medium-chain chemicals, approaches such as overexpression of endogenous enzymes or deletion of competing pathways are not available to the metabolic engineer; instead, fatty acid synthesis and reversed β-oxidation are manipulated to synthesize medium-chain chemical precursors. Even so, chain lengths remain difficult to control, which means that purification must be used to obtain the desired products, titers of which are typically low and rarely exceed milligrams per liter. By engineering the substrate specificity and activity of the pathway enzymes that generate the fatty acyl intermediates and chain-tailoring enzymes, researchers can boost the type and yield of medium-chain chemicals. Development of technologies to both manipulate chain-tailoring enzymes and to assay for products promises to enable the generation of g/L yields of medium-chain chemicals.

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Year:  2017        PMID: 29220020     DOI: 10.1038/nbt.4022

Source DB:  PubMed          Journal:  Nat Biotechnol        ISSN: 1087-0156            Impact factor:   54.908


  70 in total

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Journal:  Nat Chem Biol       Date:  2017-02-20       Impact factor: 15.040

2.  Production of 1-decanol by metabolically engineered Yarrowia lipolytica.

Authors:  Charles D Rutter; Christopher V Rao
Journal:  Metab Eng       Date:  2016-07-26       Impact factor: 9.783

3.  Tailored fatty acid synthesis via dynamic control of fatty acid elongation.

Authors:  Joseph P Torella; Tyler J Ford; Scott N Kim; Amanda M Chen; Jeffrey C Way; Pamela A Silver
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4.  Measuring mass transfer processes of octane with the help of an alkSalkB::gfp-tagged Escherichia coli.

Authors:  M C Jaspers; C Meier; A J Zehnder; H Harms; J R van der Meer
Journal:  Environ Microbiol       Date:  2001-08       Impact factor: 5.491

Review 5.  Biological valorization of low molecular weight lignin.

Authors:  Omar Y Abdelaziz; Daniel P Brink; Jens Prothmann; Krithika Ravi; Mingzhe Sun; Javier García-Hidalgo; Margareta Sandahl; Christian P Hulteberg; Charlotta Turner; Gunnar Lidén; Marie F Gorwa-Grauslund
Journal:  Biotechnol Adv       Date:  2016-10-06       Impact factor: 14.227

6.  Biosynthesis of odd-chain fatty alcohols in Escherichia coli.

Authors:  Ying-Xiu Cao; Wen-Hai Xiao; Duo Liu; Jin-Lai Zhang; Ming-Zhu Ding; Ying-Jin Yuan
Journal:  Metab Eng       Date:  2015-03-12       Impact factor: 9.783

7.  Enhancing fatty acid ethyl ester production in Saccharomyces cerevisiae through metabolic engineering and medium optimization.

Authors:  R Adam Thompson; Cong T Trinh
Journal:  Biotechnol Bioeng       Date:  2014-07-14       Impact factor: 4.530

8.  Pathway Compartmentalization in Peroxisome of Saccharomyces cerevisiae to Produce Versatile Medium Chain Fatty Alcohols.

Authors:  Jiayuan Sheng; Joseph Stevens; Xueyang Feng
Journal:  Sci Rep       Date:  2016-05-27       Impact factor: 4.379

9.  Production of fatty acid-derived oleochemicals and biofuels by synthetic yeast cell factories.

Authors:  Yongjin J Zhou; Nicolaas A Buijs; Zhiwei Zhu; Jiufu Qin; Verena Siewers; Jens Nielsen
Journal:  Nat Commun       Date:  2016-05-25       Impact factor: 14.919

10.  Production of fatty acids in Ralstonia eutropha H16 by engineering β-oxidation and carbon storage.

Authors:  Janice S Chen; Brendan Colón; Brendon Dusel; Marika Ziesack; Jeffrey C Way; Joseph P Torella
Journal:  PeerJ       Date:  2015-12-07       Impact factor: 2.984

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  22 in total

1.  Characterizing Microbiome Dynamics - Flow Cytometry Based Workflows from Pure Cultures to Natural Communities.

Authors:  Johannes Lambrecht; Florian Schattenberg; Hauke Harms; Susann Mueller
Journal:  J Vis Exp       Date:  2018-07-12       Impact factor: 1.355

2.  Engineering a Coenzyme A Detour To Expand the Product Scope and Enhance the Selectivity of the Ehrlich Pathway.

Authors:  William B Black; Edward King; Yixi Wang; Ana Jenic; Andrew T Rowley; Kosuke Seki; Ray Luo; Han Li
Journal:  ACS Synth Biol       Date:  2018-11-20       Impact factor: 5.110

3.  Production of 1-octanol in Escherichia coli by a high flux thioesterase route.

Authors:  Néstor J Hernández Lozada; Trevor R Simmons; Ke Xu; Michael A Jindra; Brian F Pfleger
Journal:  Metab Eng       Date:  2020-07-22       Impact factor: 9.783

4.  A kinetic framework for modeling oleochemical biosynthesis in Escherichia coli.

Authors:  Jackson Peoples; Sophia Ruppe; Kathryn Mains; Elia C Cipriano; Jerome M Fox
Journal:  Biotechnol Bioeng       Date:  2022-08-24       Impact factor: 4.395

5.  Matching Protein Interfaces for Improved Medium-Chain Fatty Acid Production.

Authors:  Stephen Sarria; Thomas G Bartholow; Adam Verga; Michael D Burkart; Pamela Peralta-Yahya
Journal:  ACS Synth Biol       Date:  2018-05-03       Impact factor: 5.110

6.  Chimeric Fatty Acyl-Acyl Carrier Protein Thioesterases Provide Mechanistic Insight into Enzyme Specificity and Expression.

Authors:  Marika Ziesack; Nathan Rollins; Aashna Shah; Brendon Dusel; Gordon Webster; Pamela A Silver; Jeffrey C Way
Journal:  Appl Environ Microbiol       Date:  2018-05-01       Impact factor: 4.792

7.  Asymmetric glycerophospholipids impart distinctive biophysical properties to lipid bilayers.

Authors:  Paul Smith; Dylan M Owen; Christian D Lorenz; Maria Makarova
Journal:  Biophys J       Date:  2021-03-09       Impact factor: 4.033

8.  Metatranscriptomic and Thermodynamic Insights into Medium-Chain Fatty Acid Production Using an Anaerobic Microbiome.

Authors:  Matthew J Scarborough; Christopher E Lawson; Joshua J Hamilton; Timothy J Donohue; Daniel R Noguera
Journal:  mSystems       Date:  2018-11-20       Impact factor: 6.496

9.  Short-chain ketone production by engineered polyketide synthases in Streptomyces albus.

Authors:  Satoshi Yuzawa; Mona Mirsiaghi; Renee Jocic; Tatsuya Fujii; Fabrice Masson; Veronica T Benites; Edward E K Baidoo; Eric Sundstrom; Deepti Tanjore; Todd R Pray; Anthe George; Ryan W Davis; John M Gladden; Blake A Simmons; Leonard Katz; Jay D Keasling
Journal:  Nat Commun       Date:  2018-11-01       Impact factor: 14.919

10.  Increasing the economic value of lignocellulosic stillage through medium-chain fatty acid production.

Authors:  Matthew J Scarborough; Griffin Lynch; Mitch Dickson; Mick McGee; Timothy J Donohue; Daniel R Noguera
Journal:  Biotechnol Biofuels       Date:  2018-07-19       Impact factor: 6.040

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