Literature DB >> 23798438

Tailored fatty acid synthesis via dynamic control of fatty acid elongation.

Joseph P Torella1, Tyler J Ford, Scott N Kim, Amanda M Chen, Jeffrey C Way, Pamela A Silver.   

Abstract

Medium-chain fatty acids (MCFAs, 4-12 carbons) are valuable as precursors to industrial chemicals and biofuels, but are not canonical products of microbial fatty acid synthesis. We engineered microbial production of the full range of even- and odd-chain-length MCFAs and found that MCFA production is limited by rapid, irreversible elongation of their acyl-ACP precursors. To address this limitation, we programmed an essential ketoacyl synthase to degrade in response to a chemical inducer, thereby slowing acyl-ACP elongation and redirecting flux from phospholipid synthesis to MCFA production. Our results show that induced protein degradation can be used to dynamically alter metabolic flux, and thereby increase the yield of a desired compound. The strategy reported herein should be widely useful in a range of metabolic engineering applications in which essential enzymes divert flux away from a desired product, as well as in the production of polyketides, bioplastics, and other recursively synthesized hydrocarbons for which chain-length control is desired.

Entities:  

Keywords:  biochemicals; synthetic biology

Mesh:

Substances:

Year:  2013        PMID: 23798438      PMCID: PMC3710846          DOI: 10.1073/pnas.1307129110

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  33 in total

1.  Engineering controllable protein degradation.

Authors:  Kathleen E McGinness; Tania A Baker; Robert T Sauer
Journal:  Mol Cell       Date:  2006-06-09       Impact factor: 17.970

2.  Design of a dynamic sensor-regulator system for production of chemicals and fuels derived from fatty acids.

Authors:  Fuzhong Zhang; James M Carothers; Jay D Keasling
Journal:  Nat Biotechnol       Date:  2012-03-25       Impact factor: 54.908

Review 3.  Application and engineering of fatty acid biosynthesis in Escherichia coli for advanced fuels and chemicals.

Authors:  Paul Handke; Sean A Lynch; Ryan T Gill
Journal:  Metab Eng       Date:  2010-11-04       Impact factor: 9.783

4.  Construction of an L-phenylalanine-producing tyrosine-prototrophic Escherichia coli strain using tyrA ssrA-like tagged alleles.

Authors:  Vera G Doroshenko; Rustem S Shakulov; Svetlana M Kazakova; Alexander D Kivero; Tatyana A Yampolskaya; Sergey V Mashko
Journal:  Biotechnol Lett       Date:  2010-04-03       Impact factor: 2.461

5.  Enhancing fatty acid production by the expression of the regulatory transcription factor FadR.

Authors:  Fuzhong Zhang; Mario Ouellet; Tanveer S Batth; Paul D Adams; Christopher J Petzold; Aindrila Mukhopadhyay; Jay D Keasling
Journal:  Metab Eng       Date:  2012-09-28       Impact factor: 9.783

6.  Cytoplasmic degradation of ssrA-tagged proteins.

Authors:  Christopher M Farrell; Alan D Grossman; Robert T Sauer
Journal:  Mol Microbiol       Date:  2005-09       Impact factor: 3.501

7.  Acetoacetyl-acyl carrier protein synthase, a potential regulator of fatty acid biosynthesis in bacteria.

Authors:  S Jackowski; C O Rock
Journal:  J Biol Chem       Date:  1987-06-05       Impact factor: 5.157

8.  Inhibition of fatty acid synthesis in Escherichia coli in the absence of phospholipid synthesis and release of inhibition by thioesterase action.

Authors:  P Jiang; J E Cronan
Journal:  J Bacteriol       Date:  1994-05       Impact factor: 3.490

9.  Evidence for two genes specifically involved in unsaturated fatty acid biosynthesis in Escherichia coli.

Authors:  J E Cronan; C H Birge; P R Vagelos
Journal:  J Bacteriol       Date:  1969-11       Impact factor: 3.490

10.  A genetic bistable switch utilizing nonlinear protein degradation.

Authors:  Daniel Huang; William J Holtz; Michel M Maharbiz
Journal:  J Biol Eng       Date:  2012-07-09       Impact factor: 4.355

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  57 in total

Review 1.  Fatty acid biosynthesis revisited: structure elucidation and metabolic engineering.

Authors:  Joris Beld; D John Lee; Michael D Burkart
Journal:  Mol Biosyst       Date:  2014-10-31

Review 2.  Genetic Engineering Strategies for Enhanced Biodiesel Production.

Authors:  Krishnamoorthy Hegde; Niharika Chandra; Saurabh Jyoti Sarma; Satinder Kaur Brar; Venkata Dasu Veeranki
Journal:  Mol Biotechnol       Date:  2015-07       Impact factor: 2.695

3.  Global and Targeted Lipid Analysis of Gemmata obscuriglobus Reveals the Presence of Lipopolysaccharide, a Signature of the Classical Gram-Negative Outer Membrane.

Authors:  Rajendra Mahat; Corrine Seebart; Franco Basile; Naomi L Ward
Journal:  J Bacteriol       Date:  2015-10-19       Impact factor: 3.490

4.  A microbial factory for diverse chemicals.

Authors:  Chiam Yu Ng; Anupam Chowdhury; Costas D Maranas
Journal:  Nat Biotechnol       Date:  2016-05-06       Impact factor: 54.908

Review 5.  Fuelling the future: microbial engineering for the production of sustainable biofuels.

Authors:  James C Liao; Luo Mi; Sammy Pontrelli; Shanshan Luo
Journal:  Nat Rev Microbiol       Date:  2016-03-30       Impact factor: 60.633

Review 6.  Microbial synthesis of medium-chain chemicals from renewables.

Authors:  Stephen Sarria; Nicholas S Kruyer; Pamela Peralta-Yahya
Journal:  Nat Biotechnol       Date:  2017-12-08       Impact factor: 54.908

7.  Precise metabolic engineering of carotenoid biosynthesis in Escherichia coli towards a low-cost biosensor.

Authors:  Daniel M Watstein; Monica P McNerney; Mark P Styczynski
Journal:  Metab Eng       Date:  2015-06-30       Impact factor: 9.783

8.  Lessons in Membrane Engineering for Octanoic Acid Production from Environmental Escherichia coli Isolates.

Authors:  Yingxi Chen; Michael Reinhardt; Natalia Neris; Lucas Kerns; Thomas J Mansell; Laura R Jarboe
Journal:  Appl Environ Microbiol       Date:  2018-09-17       Impact factor: 4.792

9.  Matching Protein Interfaces for Improved Medium-Chain Fatty Acid Production.

Authors:  Stephen Sarria; Thomas G Bartholow; Adam Verga; Michael D Burkart; Pamela Peralta-Yahya
Journal:  ACS Synth Biol       Date:  2018-05-03       Impact factor: 5.110

10.  Chimeric Fatty Acyl-Acyl Carrier Protein Thioesterases Provide Mechanistic Insight into Enzyme Specificity and Expression.

Authors:  Marika Ziesack; Nathan Rollins; Aashna Shah; Brendon Dusel; Gordon Webster; Pamela A Silver; Jeffrey C Way
Journal:  Appl Environ Microbiol       Date:  2018-05-01       Impact factor: 4.792

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