Literature DB >> 29215697

ARA1 regulates not only l-arabinose but also d-galactose catabolism in Trichoderma reesei.

Tiziano Benocci1, Maria Victoria Aguilar-Pontes1, Roland Sándor Kun1, Bernhard Seiboth2, Ronald P de Vries1, Paul Daly1.   

Abstract

Trichoderma reesei is used to produce saccharifying enzyme cocktails for biofuels. There is limited understanding of the transcription factors (TFs) that regulate genes involved in release and catabolism of l-arabinose and d-galactose, as the main TF XYR1 is only partially involved. Here, the T. reesei ortholog of ARA1 from Pyricularia oryzae that regulates l-arabinose releasing and catabolic genes was deleted and characterized by growth profiling and transcriptomics along with a xyr1 mutant and xyr1/ara1 double mutant. Our results show that in addition to the l-arabinose-related role, T. reesei ARA1 is essential for expression of d-galactose releasing and catabolic genes, while XYR1 is not involved in this process.
© 2017 Federation of European Biochemical Societies.

Entities:  

Keywords:  zzm321990Trichoderma reeseizzm321990; d-galactose; l-arabinose; lignocellulose degradation; metabolism; regulation

Mesh:

Substances:

Year:  2017        PMID: 29215697     DOI: 10.1002/1873-3468.12932

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  11 in total

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Authors:  Marie-Claire Harrison; Abigail L LaBella; Chris Todd Hittinger; Antonis Rokas
Journal:  Trends Genet       Date:  2021-09-15       Impact factor: 11.639

2.  Gene Co-expression Network Reveals Potential New Genes Related to Sugarcane Bagasse Degradation in Trichoderma reesei RUT-30.

Authors:  Gustavo Pagotto Borin; Marcelo Falsarella Carazzolle; Renato Augusto Corrêa Dos Santos; Diego Mauricio Riaño-Pachón; Juliana Velasco de Castro Oliveira
Journal:  Front Bioeng Biotechnol       Date:  2018-10-22

Review 3.  Modulating Transcriptional Regulation of Plant Biomass Degrading Enzyme Networks for Rational Design of Industrial Fungal Strains.

Authors:  Ebru Alazi; Arthur F J Ram
Journal:  Front Bioeng Biotechnol       Date:  2018-09-25

4.  Deletion of either the regulatory gene ara1 or metabolic gene xki1 in Trichoderma reesei leads to increased CAZyme gene expression on crude plant biomass.

Authors:  Tiziano Benocci; Maria Victoria Aguilar-Pontes; Roland Sándor Kun; Ronnie J M Lubbers; Kathleen Lail; Mei Wang; Anna Lipzen; Vivian Ng; Igor V Grigoriev; Bernhard Seiboth; Paul Daly; Ronald P de Vries
Journal:  Biotechnol Biofuels       Date:  2019-04-09       Impact factor: 6.040

5.  The gold-standard genome of Aspergillus niger NRRL 3 enables a detailed view of the diversity of sugar catabolism in fungi.

Authors:  M V Aguilar-Pontes; J Brandl; E McDonnell; K Strasser; T T M Nguyen; R Riley; S Mondo; A Salamov; J L Nybo; T C Vesth; I V Grigoriev; M R Andersen; A Tsang; R P de Vries
Journal:  Stud Mycol       Date:  2018-10-07       Impact factor: 16.097

6.  Myceliophthora thermophila Xyr1 is predominantly involved in xylan degradation and xylose catabolism.

Authors:  Ana Carolina Dos Santos Gomes; Daniel Falkoski; Evy Battaglia; Mao Peng; Maira Nicolau de Almeida; Nancy Coconi Linares; Jean-Paul Meijnen; Jaap Visser; Ronald P de Vries
Journal:  Biotechnol Biofuels       Date:  2019-09-16       Impact factor: 6.040

7.  Electrophysiological characterization of a diverse group of sugar transporters from Trichoderma reesei.

Authors:  Sami Havukainen; Jonai Pujol-Giménez; Mari Valkonen; Ann Westerholm-Parvinen; Matthias A Hediger; Christopher P Landowski
Journal:  Sci Rep       Date:  2021-07-19       Impact factor: 4.379

8.  Functional characterization of a highly specific L-arabinose transporter from Trichoderma reesei.

Authors:  Sami Havukainen; Jonai Pujol-Giménez; Mari Valkonen; Matthias A Hediger; Christopher P Landowski
Journal:  Microb Cell Fact       Date:  2021-09-08       Impact factor: 5.328

Review 9.  The Promoter Toolbox for Recombinant Gene Expression in Trichoderma reesei.

Authors:  Elisabeth Fitz; Franziska Wanka; Bernhard Seiboth
Journal:  Front Bioeng Biotechnol       Date:  2018-10-11

10.  The regulatory and transcriptional landscape associated with carbon utilization in a filamentous fungus.

Authors:  Vincent W Wu; Nils Thieme; Lori B Huberman; Axel Dietschmann; David J Kowbel; Juna Lee; Sara Calhoun; Vasanth R Singan; Anna Lipzen; Yi Xiong; Remo Monti; Matthew J Blow; Ronan C O'Malley; Igor V Grigoriev; J Philipp Benz; N Louise Glass
Journal:  Proc Natl Acad Sci U S A       Date:  2020-02-28       Impact factor: 11.205

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