Literature DB >> 29206037

Macroamidine Formation in Bottromycins Is Catalyzed by a Divergent YcaO Enzyme.

Laura Franz1, Sebastian Adam1, Javier Santos-Aberturas2, Andrew W Truman2, Jesko Koehnke1.   

Abstract

The YcaO superfamily of proteins catalyzes the phosphorylation of peptide backbone amide bonds, which leads to the formation of azolines and azoles in ribosomally synthesized and post-translationally modified peptides (RiPPs). Bottromycins are RiPPs with potent antimicrobial activity, and their biosynthetic pathway contains two divergent, stand-alone YcaO enzymes, IpoC and PurCD. From an untargeted metabolomics approach, it had been suggested that PurCD acts with a partner protein to form the 12-membered macroamidine unique to bottromycins. Here we report the biochemical characterization of IpoC and PurCD. We demonstrate that IpoC installs a cysteine-derived thiazoline, whereas PurCD alone is sufficient to create the macroamidine structure. Both enzymes are catalytically promiscuous, and we generated 10 different macroamidines. Our data provide important insights into the versatility of YcaO enzymes, their ability to utilize different nucleophiles and provide a framework for the creation of novel bottromycin derivatives with enhanced bioactivity.

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Year:  2017        PMID: 29206037     DOI: 10.1021/jacs.7b09898

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   16.383


  12 in total

Review 1.  Biosynthesis and Chemical Applications of Thioamides.

Authors:  Nilkamal Mahanta; D Miklos Szantai-Kis; E James Petersson; Douglas A Mitchell
Journal:  ACS Chem Biol       Date:  2019-01-30       Impact factor: 5.100

2.  Characterization of a Dehydratase and Methyltransferase in the Biosynthesis of Ribosomally Synthesized and Post-translationally Modified Peptides in Lachnospiraceae.

Authors:  Liujie Huo; Xiling Zhao; Jeella Z Acedo; Paola Estrada; Satish K Nair; Wilfred A van der Donk
Journal:  Chembiochem       Date:  2019-11-04       Impact factor: 3.164

3.  Enzymatic reconstitution of ribosomal peptide backbone thioamidation.

Authors:  Nilkamal Mahanta; Andi Liu; Shihui Dong; Satish K Nair; Douglas A Mitchell
Journal:  Proc Natl Acad Sci U S A       Date:  2018-03-05       Impact factor: 11.205

4.  Control of Nucleophile Chemoselectivity in Cyanobactin YcaO Heterocyclases PatD and TruD.

Authors:  Wenjia Gu; Yiwu Zheng; Taras Pogorelov; Satish K Nair; Eric W Schmidt
Journal:  ACS Chem Biol       Date:  2022-04-14       Impact factor: 4.634

5.  The hidden enzymology of bacterial natural product biosynthesis.

Authors:  Thomas A Scott; Jörn Piel
Journal:  Nat Rev Chem       Date:  2019-06-12       Impact factor: 34.035

Review 6.  New developments in RiPP discovery, enzymology and engineering.

Authors:  Manuel Montalbán-López; Thomas A Scott; Sangeetha Ramesh; Imran R Rahman; Auke J van Heel; Jakob H Viel; Vahe Bandarian; Elke Dittmann; Olga Genilloud; Yuki Goto; María José Grande Burgos; Colin Hill; Seokhee Kim; Jesko Koehnke; John A Latham; A James Link; Beatriz Martínez; Satish K Nair; Yvain Nicolet; Sylvie Rebuffat; Hans-Georg Sahl; Dipti Sareen; Eric W Schmidt; Lutz Schmitt; Konstantin Severinov; Roderich D Süssmuth; Andrew W Truman; Huan Wang; Jing-Ke Weng; Gilles P van Wezel; Qi Zhang; Jin Zhong; Jörn Piel; Douglas A Mitchell; Oscar P Kuipers; Wilfred A van der Donk
Journal:  Nat Prod Rep       Date:  2020-09-16       Impact factor: 15.111

7.  The bottromycin epimerase BotH defines a group of atypical α/β-hydrolase-fold enzymes.

Authors:  Asfandyar Sikandar; Laura Franz; Sebastian Adam; Javier Santos-Aberturas; Liliya Horbal; Andriy Luzhetskyy; Andrew W Truman; Olga V Kalinina; Jesko Koehnke
Journal:  Nat Chem Biol       Date:  2020-06-29       Impact factor: 16.174

8.  Mechanistic Basis for Ribosomal Peptide Backbone Modifications.

Authors:  Shi-Hui Dong; Andi Liu; Nilkamal Mahanta; Douglas A Mitchell; Satish K Nair
Journal:  ACS Cent Sci       Date:  2019-04-16       Impact factor: 14.553

9.  Uncovering the unexplored diversity of thioamidated ribosomal peptides in Actinobacteria using the RiPPER genome mining tool.

Authors:  Javier Santos-Aberturas; Govind Chandra; Luca Frattaruolo; Rodney Lacret; Thu H Pham; Natalia M Vior; Tom H Eyles; Andrew W Truman
Journal:  Nucleic Acids Res       Date:  2019-05-21       Impact factor: 19.160

Review 10.  Translation-Targeting RiPPs and Where to Find Them.

Authors:  Dmitrii Y Travin; Dmitry Bikmetov; Konstantin Severinov
Journal:  Front Genet       Date:  2020-03-31       Impact factor: 4.599

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