Literature DB >> 29203954

Estimating bounds on causal effects in high-dimensional and possibly confounded systems.

Daniel Malinsky1, Peter Spirtes1.   

Abstract

We present an algorithm for estimating bounds on causal effects from observational data which combines graphical model search with simple linear regression. We assume that the underlying system can be represented by a linear structural equation model with no feedback, and we allow for the possibility of latent confounders. Under assumptions standard in the causal search literature, we use conditional independence constraints to search for an equivalence class of ancestral graphs. Then, for each model in the equivalence class, we perform the appropriate regression (using causal structure information to determine which covariates to adjust for) to estimate a set of possible causal effects. Our approach is based on the IDA procedure of Maathuis et al. (2009), which assumes that all relevant variables have been measured (i.e., no latent confounders). We generalize their work by relaxing this assumption, which is often violated in applied contexts. We validate the performance of our algorithm in simulation experiments.

Entities:  

Keywords:  Causal inference; Markov equivalence; ancestral graphs; latent confounding

Year:  2017        PMID: 29203954      PMCID: PMC5711475          DOI: 10.1016/j.ijar.2017.06.005

Source DB:  PubMed          Journal:  Int J Approx Reason        ISSN: 0888-613X            Impact factor:   3.816


  7 in total

Review 1.  Causal effects in clinical and epidemiological studies via potential outcomes: concepts and analytical approaches.

Authors:  R J Little; D B Rubin
Journal:  Annu Rev Public Health       Date:  2000       Impact factor: 21.981

2.  Predicting causal effects in large-scale systems from observational data.

Authors:  Marloes H Maathuis; Diego Colombo; Markus Kalisch; Peter Bühlmann
Journal:  Nat Methods       Date:  2010-04       Impact factor: 28.547

3.  Propensity scores and M-structures.

Authors:  Arvid Sjölander
Journal:  Stat Med       Date:  2009-04-30       Impact factor: 2.373

4.  ParceLiNGAM: a causal ordering method robust against latent confounders.

Authors:  Tatsuya Tashiro; Shohei Shimizu; Aapo Hyvärinen; Takashi Washio
Journal:  Neural Comput       Date:  2013-10-08       Impact factor: 2.026

5.  Causal stability ranking.

Authors:  Daniel J Stekhoven; Izabel Moraes; Gardar Sveinbjörnsson; Lars Hennig; Marloes H Maathuis; Peter Bühlmann
Journal:  Bioinformatics       Date:  2012-09-03       Impact factor: 6.937

6.  Estimating Causal Effects with Ancestral Graph Markov Models.

Authors:  Daniel Malinsky; Peter Spirtes
Journal:  JMLR Workshop Conf Proc       Date:  2016-08

7.  A Hybrid Causal Search Algorithm for Latent Variable Models.

Authors:  Juan Miguel Ogarrio; Peter Spirtes; Joe Ramsey
Journal:  JMLR Workshop Conf Proc       Date:  2016-08
  7 in total

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