Literature DB >> 29201283

A COMPARISON OF NETWORK DEFINITIONS FOR DETECTING SEX DIFFERENCES IN BRAIN CONNECTIVITY USING SUPPORT VECTOR MACHINES.

George W Hafzalla1, Anjanibhargavi Ragothaman1, Joshua Faskowitz1, Neda Jahanshad1, Katie L McMahon2, Greig I de Zubicaray3, Margaret J Wright4, Meredith N Braskie1, Gautam Prasad1, Paul M Thompson1.   

Abstract

Human brain connectomics is a rapidly evolving area of research, using various methods to define connections or interactions between pairs of regions. Here we evaluate how the choice of (1) regions of interest, (2) definitions of a connection, and (3) normalization of connection weights to total brain connectivity and region size, affect our calculation of the structural connectome. Sex differences in the structural connectome have been established previously. We study how choices in reconstruction of the connectome affect our ability to classify subjects by sex using a support vector machine (SVM) classifier. The use of cluster-based regions led to higher accuracy in sex classification, compared to atlas-based regions. Sex classification was more accurate when based on finer cortical partitions and when using dilations of regions of interest prior to computing brain networks.

Entities:  

Keywords:  atlas; brain connectivity; classification; cluster; networks; nodal

Year:  2017        PMID: 29201283      PMCID: PMC5705099          DOI: 10.1109/ISBI.2017.7950675

Source DB:  PubMed          Journal:  Proc IEEE Int Symp Biomed Imaging        ISSN: 1945-7928


  21 in total

1.  Mapping the human connectome at multiple scales with diffusion spectrum MRI.

Authors:  Leila Cammoun; Xavier Gigandet; Djalel Meskaldji; Jean Philippe Thiran; Olaf Sporns; Kim Q Do; Philippe Maeder; Reto Meuli; Patric Hagmann
Journal:  J Neurosci Methods       Date:  2011-10-06       Impact factor: 2.390

2.  Test-retest reliability of structural brain networks from diffusion MRI.

Authors:  Colin R Buchanan; Cyril R Pernet; Krzysztof J Gorgolewski; Amos J Storkey; Mark E Bastin
Journal:  Neuroimage       Date:  2013-10-02       Impact factor: 6.556

3.  Mapping anatomical connectivity patterns of human cerebral cortex using in vivo diffusion tensor imaging tractography.

Authors:  Gaolang Gong; Yong He; Luis Concha; Catherine Lebel; Donald W Gross; Alan C Evans; Christian Beaulieu
Journal:  Cereb Cortex       Date:  2008-06-20       Impact factor: 5.357

4.  Magnetic resonance field strength effects on diffusion measures and brain connectivity networks.

Authors:  Liang Zhan; Bryon A Mueller; Neda Jahanshad; Yan Jin; Christophe Lenglet; Essa Yacoub; Guillermo Sapiro; Kamil Ugurbil; Noam Harel; Arthur W Toga; Kelvin O Lim; Paul M Thompson
Journal:  Brain Connect       Date:  2013-01-30

Review 5.  The parcellation-based connectome: limitations and extensions.

Authors:  Marcel A de Reus; Martijn P van den Heuvel
Journal:  Neuroimage       Date:  2013-04-01       Impact factor: 6.556

6.  OPTIMIZING BRAIN CONNECTIVITY NETWORKS FOR DISEASE CLASSIFICATION USING EPIC.

Authors:  Gautam Prasad; Shantanu H Joshi; Paul M Thompson
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2014-05

7.  Hierarchical topological network analysis of anatomical human brain connectivity and differences related to sex and kinship.

Authors:  Julio M Duarte-Carvajalino; Neda Jahanshad; Christophe Lenglet; Katie L McMahon; Greig I de Zubicaray; Nicholas G Martin; Margaret J Wright; Paul M Thompson; Guillermo Sapiro
Journal:  Neuroimage       Date:  2011-11-12       Impact factor: 6.556

8.  HOW DO SPATIAL AND ANGULAR RESOLUTION AFFECT BRAIN CONNECTIVITY MAPS FROM DIFFUSION MRI?

Authors:  Liang Zhan; Daniel Franc; Vishal Patel; Neda Jahanshad; Yan Jin; Bryon A Mueller; Matt A Bernstein; Bret J Borowski; Clifford R Jack; Arthur W Toga; Kelvin O Lim; Paul M Thompson
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2012

9.  HERITABILITY OF BRAIN NETWORK TOPOLOGY IN 853 TWINS AND SIBLINGS.

Authors:  L Zhan; N Jahanshad; J Faskowitz; D Zhu; G Prasad; N G Martin; G I de Zubicaray; K L McMahon; M J Wright; P M Thompson
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2015-04

10.  Rich club organization and intermodule communication in the cat connectome.

Authors:  Marcel A de Reus; Martijn P van den Heuvel
Journal:  J Neurosci       Date:  2013-08-07       Impact factor: 6.167

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