Literature DB >> 29197028

Best practices for authenticating cell lines.

Raymond W Nims1, Yvonne Reid2.   

Abstract

Experiments using cell cultures are only valid to the extent that the cell culture is a true model system for the biological system being investigated. To assure that a cell line is and remains an appropriate biological model, its identity, purity, ploidy, and phenotype must be maintained. These characteristics comprise and determine the authenticity of a cell line. Routine monitoring of the cell line through microscopic examination of morphology can help to determine authenticity, as can the determination of phenotypic status. Assays designed to confirm cell identity and ploidy and freedom from cross-contaminating cell types may need to be performed at certain times, as such information may not be obtained through morphologic and phenotypic examinations alone. The best practices associated with establishing cell line authenticity are described in this article.

Keywords:  Cell line identity; Morphology; Phenotype; Ploidy; Purity; STR profile

Mesh:

Year:  2017        PMID: 29197028     DOI: 10.1007/s11626-017-0212-8

Source DB:  PubMed          Journal:  In Vitro Cell Dev Biol Anim        ISSN: 1071-2690            Impact factor:   2.416


  15 in total

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Journal:  Science       Date:  2010-08-27       Impact factor: 47.728

2.  Species identification in cell culture: a two-pronged molecular approach.

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Journal:  In Vitro Cell Dev Biol Anim       Date:  2007-10-13       Impact factor: 2.416

Review 3.  Current methods of adipogenic differentiation of mesenchymal stem cells.

Authors:  Michelle A Scott; Virginia T Nguyen; Benjamin Levi; Aaron W James
Journal:  Stem Cells Dev       Date:  2011-06-20       Impact factor: 3.272

Review 4.  Best practices in cell culture: an overview.

Authors:  John M Baust; Gertrude Case Buehring; Lia Campbell; Eugene Elmore; John W Harbell; Raymond W Nims; Paul Price; Yvonne A Reid; Frank Simione
Journal:  In Vitro Cell Dev Biol Anim       Date:  2017-08-14       Impact factor: 2.416

5.  Origin of the U87MG glioma cell line: Good news and bad news.

Authors:  Marie Allen; Mia Bjerke; Hanna Edlund; Sven Nelander; Bengt Westermark
Journal:  Sci Transl Med       Date:  2016-08-31       Impact factor: 17.956

Review 6.  Best practices for detecting and mitigating the risk of cell culture contaminants.

Authors:  Raymond W Nims; Paul J Price
Journal:  In Vitro Cell Dev Biol Anim       Date:  2017-12-01       Impact factor: 2.416

7.  Authentication of African green monkey cell lines using human short tandem repeat markers.

Authors:  Jamie L Almeida; Carolyn R Hill; Kenneth D Cole
Journal:  BMC Biotechnol       Date:  2011-11-07       Impact factor: 2.563

8.  Human biosample authentication using the high-throughput, cost-effective SNPtrace(TM) system.

Authors:  May M Y Liang-Chu; Mamie Yu; Peter M Haverty; Julie Koeman; Janet Ziegle; Marie Lee; Richard Bourgon; Richard M Neve
Journal:  PLoS One       Date:  2015-02-25       Impact factor: 3.240

9.  Mouse cell line authentication.

Authors:  Jamie L Almeida; Carolyn R Hill; Kenneth D Cole
Journal:  Cytotechnology       Date:  2013-02-22       Impact factor: 2.058

10.  SNP array profiling of mouse cell lines identifies their strains of origin and reveals cross-contamination and widespread aneuploidy.

Authors:  John P Didion; Ryan J Buus; Zohreh Naghashfar; David W Threadgill; Herbert C Morse; Fernando Pardo-Manuel de Villena
Journal:  BMC Genomics       Date:  2014-10-03       Impact factor: 3.969

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  7 in total

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Authors:  Simon Gutbier; Patrick May; Sylvie Berthelot; Abhimanyu Krishna; Timo Trefzer; Mehri Behbehani; Liudmila Efremova; Johannes Delp; Gerhard Gstraunthaler; Tanja Waldmann; Marcel Leist
Journal:  Arch Toxicol       Date:  2018-10-08       Impact factor: 5.153

Review 3.  Opinion: Are Organoids the End of Model Evolution for Studying Host Intestinal Epithelium/Microbe Interactions?

Authors:  Michelle M George; Mushfiqur Rahman; Jessica Connors; Andrew W Stadnyk
Journal:  Microorganisms       Date:  2019-09-29

4.  Experimental models of endocrine responsive breast cancer: strengths, limitations, and use.

Authors:  Robert Clarke; Brandon C Jones; Catherine M Sevigny; Leena A Hilakivi-Clarke; Surojeet Sengupta
Journal:  Cancer Drug Resist       Date:  2021-07-08

5.  Screening for 15 pathogenic viruses in human cell lines registered at the JCRB Cell Bank: characterization of in vitro human cells by viral infection.

Authors:  Setsuko Shioda; Fumio Kasai; Ken Watanabe; Kohei Kawakami; Azusa Ohtani; Masashi Iemura; Midori Ozawa; Akemi Arakawa; Noriko Hirayama; Eiko Kawaguchi; Tomoko Tano; Sayaka Miyata; Motonobu Satoh; Norio Shimizu; Arihiro Kohara
Journal:  R Soc Open Sci       Date:  2018-05-02       Impact factor: 2.963

6.  HuH-7 reference genome profile: complex karyotype composed of massive loss of heterozygosity.

Authors:  Fumio Kasai; Noriko Hirayama; Midori Ozawa; Motonobu Satoh; Arihiro Kohara
Journal:  Hum Cell       Date:  2018-05-17       Impact factor: 4.174

7.  Short tandem repeat profiling for the authentication of cancer stem-like cells.

Authors:  Paola Visconti; Federica Parodi; Barbara Parodi; Lucia Casarino; Paolo Romano; Mariachiara Buccarelli; Roberto Pallini; Quintino Giorgio D'Alessandris; Andrea Montori; Emanuela Pilozzi; Lucia Ricci-Vitiani
Journal:  Int J Cancer       Date:  2020-11-09       Impact factor: 7.396

  7 in total

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