Literature DB >> 29191460

The mitochondrial 2-oxoadipate and 2-oxoglutarate dehydrogenase complexes share their E2 and E3 components for their function and both generate reactive oxygen species.

Natalia S Nemeria1, Gary Gerfen2, Pradeep Reddy Nareddy3, Luying Yang3, Xu Zhang3, Michal Szostak3, Frank Jordan4.   

Abstract

Herein are reported unique properties of the novel human thiamin diphosphate (ThDP)-dependent enzyme 2-oxoadipate dehydrogenase (hE1a), known as dehydrogenase E1 and transketolase domain-containing protein 1 that is encoded by the DHTKD1 gene. It is involved in the oxidative decarboxylation of 2-oxoadipate (OA) to glutaryl-CoA on the final degradative pathway of L-lysine and is critical for mitochondrial metabolism. Functionally active recombinant hE1a has been produced according to both kinetic and spectroscopic criteria in our toolbox leading to the following conclusions: (i) The hE1a has recruited the dihydrolipoyl succinyltransferase (hE2o) and the dihydrolipoyl dehydrogenase (hE3) components of the tricarboxylic acid cycle 2-oxoglutarate dehydrogenase complex (OGDHc) for its activity. (ii) 2-Oxoglutarate (OG) and 2-oxoadipate (OA) could be oxidized by hE1a, however, hE1a displays an approximately 49-fold preference in catalytic efficiency for OA over OG, indicating that hE1a is specific to the 2-oxoadipate dehydrogenase complex. (iii) The hE1a forms the ThDP-enamine radical from OA according to electron paramagnetic resonance detection in the oxidative half reaction, and could produce superoxide and H2O2 from decarboxylation of OA in the forward physiological direction, as also seen with the 2-oxoglutarate dehydrogenase hE1o component. (iv) Once assembled to complex with the same hE2o and hE3 components, the hE1o and hE1a display strikingly different regulation: both succinyl-CoA and glutaryl-CoA significantly reduced the hE1o activity, but not the activity of hE1a.
Copyright © 2017 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  2-oxoadipate dehydrogenase; 2-oxoadipate dehydrogenase complex assembly with hE2o and hE3; Glutaryl-CoA; L-lysine degradative pathway; Superoxide and H(2)O(2) generation; ThDP-enamine radical; α-ketol carboligation product

Mesh:

Substances:

Year:  2017        PMID: 29191460     DOI: 10.1016/j.freeradbiomed.2017.11.018

Source DB:  PubMed          Journal:  Free Radic Biol Med        ISSN: 0891-5849            Impact factor:   7.376


  17 in total

1.  Inhibition and Crystal Structure of the Human DHTKD1-Thiamin Diphosphate Complex.

Authors:  João Leandro; Susmita Khamrui; Hui Wang; Chalada Suebsuwong; Natalia S Nemeria; Khoi Huynh; Moses Moustakim; Cody Secor; May Wang; Tetyana Dodatko; Brandon Stauffer; Christopher G Wilson; Chunli Yu; Michelle R Arkin; Frank Jordan; Roberto Sanchez; Robert J DeVita; Michael B Lazarus; Sander M Houten
Journal:  ACS Chem Biol       Date:  2020-07-09       Impact factor: 5.100

2.  DHTKD1 and OGDH display substrate overlap in cultured cells and form a hybrid 2-oxo acid dehydrogenase complex in vivo.

Authors:  João Leandro; Tetyana Dodatko; Jan Aten; Natalia S Nemeria; Xu Zhang; Frank Jordan; Ronald C Hendrickson; Roberto Sanchez; Chunli Yu; Robert J DeVita; Sander M Houten
Journal:  Hum Mol Genet       Date:  2020-05-08       Impact factor: 6.150

Review 3.  Human 2-Oxoglutarate Dehydrogenase and 2-Oxoadipate Dehydrogenase Both Generate Superoxide/H2O2 in a Side Reaction and Each Could Contribute to Oxidative Stress in Mitochondria.

Authors:  Frank Jordan; Natalia Nemeria; Gary Gerfen
Journal:  Neurochem Res       Date:  2019-03-07       Impact factor: 3.996

4.  Oxidative decarboxylation of pyruvate by 1-deoxy-d-xyulose 5-phosphate synthase, a central metabolic enzyme in bacteria.

Authors:  Alicia A DeColli; Natalia S Nemeria; Ananya Majumdar; Gary J Gerfen; Frank Jordan; Caren L Freel Meyers
Journal:  J Biol Chem       Date:  2018-05-21       Impact factor: 5.157

Review 5.  Dihydrolipoamide dehydrogenase, pyruvate oxidation, and acetylation-dependent mechanisms intersecting drug iatrogenesis.

Authors:  I F Duarte; J Caio; M F Moedas; L A Rodrigues; A P Leandro; I A Rivera; M F B Silva
Journal:  Cell Mol Life Sci       Date:  2021-10-31       Impact factor: 9.261

6.  Administration of Phosphonate Inhibitors of Dehydrogenases of 2-Oxoglutarate and 2-Oxoadipate to Rats Elicits Target-Specific Metabolic and Physiological Responses.

Authors:  Victoria I Bunik; Artem V Artiukhov; Alexey V Kazantsev; Vasily A Aleshin; Alexandra I Boyko; Alexander L Ksenofontov; Nikolay V Lukashev; Anastasia V Graf
Journal:  Front Chem       Date:  2022-06-20       Impact factor: 5.545

7.  Crystal structure and interaction studies of human DHTKD1 provide insight into a mitochondrial megacomplex in lysine catabolism.

Authors:  Gustavo A Bezerra; William R Foster; Henry J Bailey; Kevin G Hicks; Sven W Sauer; Bianca Dimitrov; Thomas J McCorvie; Jürgen G Okun; Jared Rutter; Stefan Kölker; Wyatt W Yue
Journal:  IUCrJ       Date:  2020-06-10       Impact factor: 4.769

8.  Structure-function analyses of the G729R 2-oxoadipate dehydrogenase genetic variant associated with a disorder of l-lysine metabolism.

Authors:  Xu Zhang; Natalia S Nemeria; João Leandro; Sander Houten; Michael Lazarus; Gary Gerfen; Oliver Ozohanics; Attila Ambrus; Balint Nagy; Roman Brukh; Frank Jordan
Journal:  J Biol Chem       Date:  2020-04-17       Impact factor: 5.157

Review 9.  Toward an Understanding of the Structural and Mechanistic Aspects of Protein-Protein Interactions in 2-Oxoacid Dehydrogenase Complexes.

Authors:  Natalia S Nemeria; Xu Zhang; Joao Leandro; Jieyu Zhou; Luying Yang; Sander M Houten; Frank Jordan
Journal:  Life (Basel)       Date:  2021-04-29

10.  Catalysis of transthiolacylation in the active centers of dihydrolipoamide acyltransacetylase components of 2-oxo acid dehydrogenase complexes.

Authors:  Joydeep Chakraborty; Natalia S Nemeria; Edgardo Farinas; Frank Jordan
Journal:  FEBS Open Bio       Date:  2018-06-04       Impact factor: 2.693

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