Literature DB >> 32160276

DHTKD1 and OGDH display substrate overlap in cultured cells and form a hybrid 2-oxo acid dehydrogenase complex in vivo.

João Leandro1,2, Tetyana Dodatko1,2, Jan Aten3, Natalia S Nemeria4, Xu Zhang4, Frank Jordan4, Ronald C Hendrickson5, Roberto Sanchez6,7, Chunli Yu1,8, Robert J DeVita6,7, Sander M Houten1,2.   

Abstract

Glutaric aciduria type 1 (GA1) is an inborn error of lysine degradation characterized by a specific encephalopathy that is caused by toxic accumulation of lysine degradation intermediates. Substrate reduction through inhibition of DHTKD1, an enzyme upstream of the defective glutaryl-CoA dehydrogenase, has been investigated as a potential therapy, but revealed the existence of an alternative enzymatic source of glutaryl-CoA. Here, we show that loss of DHTKD1 in glutaryl-CoA dehydrogenase-deficient HEK-293 cells leads to a 2-fold decrease in the established GA1 clinical biomarker glutarylcarnitine and demonstrate that oxoglutarate dehydrogenase (OGDH) is responsible for this remaining glutarylcarnitine production. We furthermore show that DHTKD1 interacts with OGDH, dihydrolipoyl succinyltransferase and dihydrolipoamide dehydrogenase to form a hybrid 2-oxoglutaric and 2-oxoadipic acid dehydrogenase complex. In summary, 2-oxoadipic acid is a substrate for DHTKD1, but also for OGDH in a cell model system. The classical 2-oxoglutaric dehydrogenase complex can exist as a previously undiscovered hybrid containing DHTKD1 displaying improved kinetics towards 2-oxoadipic acid.
© The Author(s) 2020. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Entities:  

Year:  2020        PMID: 32160276      PMCID: PMC7206849          DOI: 10.1093/hmg/ddaa037

Source DB:  PubMed          Journal:  Hum Mol Genet        ISSN: 0964-6906            Impact factor:   6.150


  44 in total

1.  Patterns, evolution, and severity of striatal injury in insidious- vs acute-onset glutaric aciduria type 1.

Authors:  Nikolas Boy; Sven F Garbade; Jana Heringer; Angelika Seitz; Stefan Kölker; Inga Harting
Journal:  J Inherit Metab Dis       Date:  2019-01       Impact factor: 4.982

2.  Multifactorial modulation of susceptibility to l-lysine in an animal model of glutaric aciduria type I.

Authors:  Sven W Sauer; Silvana Opp; Shoko Komatsuzaki; Anna-Eva Blank; Michel Mittelbronn; Peter Burgard; D M Koeller; Jürgen G Okun; Stefan Kölker
Journal:  Biochim Biophys Acta       Date:  2015-01-02

3.  Biochemical, pathologic and behavioral analysis of a mouse model of glutaric acidemia type I.

Authors:  David M Koeller; Michael Woontner; Linda S Crnic; Bette Kleinschmidt-DeMasters; Janet Stephens; Edgar L Hunt; Stephen I Goodman
Journal:  Hum Mol Genet       Date:  2002-02-15       Impact factor: 6.150

Review 4.  Glutaryl-CoA dehydrogenase mutations in glutaric acidemia (type I): review and report of thirty novel mutations.

Authors:  S I Goodman; D E Stein; S Schlesinger; E Christensen; M Schwartz; C R Greenberg; O N Elpeleg
Journal:  Hum Mutat       Date:  1998       Impact factor: 4.878

Review 5.  Pyridoxine-Dependent Epilepsy: An Expanding Clinical Spectrum.

Authors:  Clara D M van Karnebeek; Sylvia A Tiebout; Jikkemien Niermeijer; Bwee Tien Poll-The; Aisha Ghani; Curtis R Coughlin; Johan L K Van Hove; Jost Wigand Richter; Hans Juergen Christen; Renata Gallagher; Hans Hartmann; Sylvia Stockler-Ipsiroglu
Journal:  Pediatr Neurol       Date:  2016-01-11       Impact factor: 3.372

6.  Mouse lysine catabolism to aminoadipate occurs primarily through the saccharopine pathway; implications for pyridoxine dependent epilepsy (PDE).

Authors:  Izabella Agostinho Pena; Lygia Azevedo Marques; Ângelo B A Laranjeira; José A Yunes; Marcos N Eberlin; Alex MacKenzie; Paulo Arruda
Journal:  Biochim Biophys Acta Mol Basis Dis       Date:  2016-09-08       Impact factor: 5.187

7.  Tryptophan and lysine metabolism in alpha-aminoadipic aciduria.

Authors:  M H Fischer; R R Brown
Journal:  Am J Med Genet       Date:  1980

8.  Defining the consequences of genetic variation on a proteome-wide scale.

Authors:  Joel M Chick; Steven C Munger; Petr Simecek; Edward L Huttlin; Kwangbom Choi; Daniel M Gatti; Narayanan Raghupathy; Karen L Svenson; Gary A Churchill; Steven P Gygi
Journal:  Nature       Date:  2016-06-15       Impact factor: 49.962

9.  Genetic basis of hyperlysinemia.

Authors:  Sander M Houten; Heleen Te Brinke; Simone Denis; Jos Pn Ruiter; Alida C Knegt; Johannis Bc de Klerk; Persephone Augoustides-Savvopoulou; Johannes Häberle; Matthias R Baumgartner; Turgay Coşkun; Johannes Zschocke; Jörn Oliver Sass; Bwee Tien Poll-The; Ronald Ja Wanders; Marinus Duran
Journal:  Orphanet J Rare Dis       Date:  2013-04-09       Impact factor: 4.123

10.  Interaction of glutaric aciduria type 1-related glutaryl-CoA dehydrogenase with mitochondrial matrix proteins.

Authors:  Jessica Schmiesing; Hartmut Schlüter; Kurt Ullrich; Thomas Braulke; Chris Mühlhausen
Journal:  PLoS One       Date:  2014-02-03       Impact factor: 3.240

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  7 in total

1.  Inhibition and Crystal Structure of the Human DHTKD1-Thiamin Diphosphate Complex.

Authors:  João Leandro; Susmita Khamrui; Hui Wang; Chalada Suebsuwong; Natalia S Nemeria; Khoi Huynh; Moses Moustakim; Cody Secor; May Wang; Tetyana Dodatko; Brandon Stauffer; Christopher G Wilson; Chunli Yu; Michelle R Arkin; Frank Jordan; Roberto Sanchez; Robert J DeVita; Michael B Lazarus; Sander M Houten
Journal:  ACS Chem Biol       Date:  2020-07-09       Impact factor: 5.100

2.  Structure-function analyses of the G729R 2-oxoadipate dehydrogenase genetic variant associated with a disorder of l-lysine metabolism.

Authors:  Xu Zhang; Natalia S Nemeria; João Leandro; Sander Houten; Michael Lazarus; Gary Gerfen; Oliver Ozohanics; Attila Ambrus; Balint Nagy; Roman Brukh; Frank Jordan
Journal:  J Biol Chem       Date:  2020-04-17       Impact factor: 5.157

Review 3.  Toward an Understanding of the Structural and Mechanistic Aspects of Protein-Protein Interactions in 2-Oxoacid Dehydrogenase Complexes.

Authors:  Natalia S Nemeria; Xu Zhang; Joao Leandro; Jieyu Zhou; Luying Yang; Sander M Houten; Frank Jordan
Journal:  Life (Basel)       Date:  2021-04-29

4.  Knock-Out of DHTKD1 Alters Mitochondrial Respiration and Function, and May Represent a Novel Pathway in Cardiometabolic Disease Risk.

Authors:  Chuan Wang; M Wade Calcutt; Jane F Ferguson
Journal:  Front Endocrinol (Lausanne)       Date:  2021-08-13       Impact factor: 5.555

5.  Functional Versatility of the Human 2-Oxoadipate Dehydrogenase in the L-Lysine Degradation Pathway toward Its Non-Cognate Substrate 2-Oxopimelic Acid.

Authors:  Natalia S Nemeria; Balint Nagy; Roberto Sanchez; Xu Zhang; João Leandro; Attila Ambrus; Sander M Houten; Frank Jordan
Journal:  Int J Mol Sci       Date:  2022-07-26       Impact factor: 6.208

6.  Heterozygous DHTKD1 Variants in Two European Cohorts of Amyotrophic Lateral Sclerosis Patients.

Authors:  Alma Osmanovic; Isabel Gogol; Helge Martens; Maylin Widjaja; Kathrin Müller; Olivia Schreiber-Katz; Friedrich Feuerhake; Claus-Dieter Langhans; Gunnar Schmidt; Peter M Andersen; Albert C Ludolph; Jochen H Weishaupt; Frank Brand; Susanne Petri; Ruthild G Weber
Journal:  Genes (Basel)       Date:  2021-12-29       Impact factor: 4.096

7.  The biochemical subtype is a predictor for cognitive function in glutaric aciduria type 1: a national prospective follow-up study.

Authors:  E M Charlotte Märtner; Eva Thimm; Philipp Guder; Katharina A Schiergens; Frank Rutsch; Sylvia Roloff; Iris Marquardt; Anibh M Das; Peter Freisinger; Sarah C Grünert; Johannes Krämer; Matthias R Baumgartner; Skadi Beblo; Claudia Haase; Andrea Dieckmann; Martin Lindner; Andrea Näke; Georg F Hoffmann; Chris Mühlhausen; Magdalena Walter; Sven F Garbade; Esther M Maier; Stefan Kölker; Nikolas Boy
Journal:  Sci Rep       Date:  2021-09-29       Impact factor: 4.379

  7 in total

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