Literature DB >> 29185070

Single-cell analysis of diversity in human stem cell-derived neurons.

Lise J Harbom1, Nadine Michel1, Michael J McConnell2.   

Abstract

Neural stem and progenitor cells produce one of the most remarkable organs in nature, the human brain. Among neural stem cell progeny, post-mitotic neurons are likewise remarkably diverse. Single-cell transcriptomic approaches are now cataloging a long-sought-after molecular taxonomy of neuronal diversity in the brain. Contemporary single-cell omic classifications of neuronal diversity build from electrophysiological approaches that for decades have measured and cataloged diverse biophysical properties of single neurons. With the widespread application of human pluripotent stem cell-based models of neurogenesis to investigate disease pathology and to develop new drugs, a high-resolution understanding of neuronal diversity in vivo is essential to benchmark the state of in vitro models of human neurological disease.

Entities:  

Keywords:  Neural development; Neural stem cells; Neuronal diversity; Pluripotent stem cells; Single-cell analysis

Mesh:

Year:  2017        PMID: 29185070      PMCID: PMC6260820          DOI: 10.1007/s00441-017-2728-3

Source DB:  PubMed          Journal:  Cell Tissue Res        ISSN: 0302-766X            Impact factor:   5.249


  81 in total

Review 1.  Neuronal cell types.

Authors:  Richard H Masland
Journal:  Curr Biol       Date:  2004-07-13       Impact factor: 10.834

2.  Single-cell trajectory detection uncovers progression and regulatory coordination in human B cell development.

Authors:  Sean C Bendall; Kara L Davis; El-Ad David Amir; Michelle D Tadmor; Erin F Simonds; Tiffany J Chen; Daniel K Shenfeld; Garry P Nolan; Dana Pe'er
Journal:  Cell       Date:  2014-04-24       Impact factor: 41.582

Review 3.  Long-term single-cell imaging of mammalian stem cells.

Authors:  Timm Schroeder
Journal:  Nat Methods       Date:  2011-03-30       Impact factor: 28.547

Review 4.  Generating neuronal diversity in the mammalian cerebral cortex.

Authors:  Simona Lodato; Paola Arlotta
Journal:  Annu Rev Cell Dev Biol       Date:  2015-09-11       Impact factor: 13.827

5.  Predicting the functional states of human iPSC-derived neurons with single-cell RNA-seq and electrophysiology.

Authors:  C Bardy; M van den Hurk; B Kakaradov; J A Erwin; B N Jaeger; R V Hernandez; T Eames; A A Paucar; M Gorris; C Marchand; R Jappelli; J Barron; A K Bryant; M Kellogg; R S Lasken; B P F Rutten; H W M Steinbusch; G W Yeo; F H Gage
Journal:  Mol Psychiatry       Date:  2016-10-04       Impact factor: 15.992

Review 6.  Cellular Deconstruction: Finding Meaning in Individual Cell Variation.

Authors:  James Eberwine; Junhyong Kim
Journal:  Trends Cell Biol       Date:  2015-10       Impact factor: 20.808

7.  Neuronal subtypes and diversity revealed by single-nucleus RNA sequencing of the human brain.

Authors:  Blue B Lake; Rizi Ai; Gwendolyn E Kaeser; Neeraj S Salathia; Yun C Yung; Rui Liu; Andre Wildberg; Derek Gao; Ho-Lim Fung; Song Chen; Raakhee Vijayaraghavan; Julian Wong; Allison Chen; Xiaoyan Sheng; Fiona Kaper; Richard Shen; Mostafa Ronaghi; Jian-Bing Fan; Wei Wang; Jerold Chun; Kun Zhang
Journal:  Science       Date:  2016-06-24       Impact factor: 47.728

8.  Markers and methods for cell sorting of human embryonic stem cell-derived neural cell populations.

Authors:  Jan Pruszak; Kai-Christian Sonntag; Moe Hein Aung; Rosario Sanchez-Pernaute; Ole Isacson
Journal:  Stem Cells       Date:  2007-06-21       Impact factor: 6.277

9.  Ubiquitous L1 mosaicism in hippocampal neurons.

Authors:  Kyle R Upton; Daniel J Gerhardt; J Samuel Jesuadian; Sandra R Richardson; Francisco J Sánchez-Luque; Gabriela O Bodea; Adam D Ewing; Carmen Salvador-Palomeque; Marjo S van der Knaap; Paul M Brennan; Adeline Vanderver; Geoffrey J Faulkner
Journal:  Cell       Date:  2015-04-09       Impact factor: 41.582

10.  Single-cell analysis of long non-coding RNAs in the developing human neocortex.

Authors:  Siyuan John Liu; Tomasz J Nowakowski; Alex A Pollen; Jan H Lui; Max A Horlbeck; Frank J Attenello; Daniel He; Jonathan S Weissman; Arnold R Kriegstein; Aaron A Diaz; Daniel A Lim
Journal:  Genome Biol       Date:  2016-04-14       Impact factor: 13.583

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  6 in total

1.  Neurons with Complex Karyotypes Are Rare in Aged Human Neocortex.

Authors:  William D Chronister; Ian E Burbulis; Margaret B Wierman; Matthew J Wolpert; Mark F Haakenson; Aiden C B Smith; Joel E Kleinman; Thomas M Hyde; Daniel R Weinberger; Stefan Bekiranov; Michael J McConnell
Journal:  Cell Rep       Date:  2019-01-22       Impact factor: 9.423

Review 2.  Stem Cell Therapy in Limb Ischemia: State-of-Art, Perspective, and Possible Impacts of Endometrial-Derived Stem Cells.

Authors:  Saeed Khodayari; Hamid Khodayari; Somayeh Ebrahimi-Barough; Mehdi Khanmohammadi; Md Shahidul Islam; Miko Vesovic; Arash Goodarzi; Habibollah Mahmoodzadeh; Karim Nayernia; Nasser Aghdami; Jafar Ai
Journal:  Front Cell Dev Biol       Date:  2022-05-23

3.  Neural stem cells: developmental mechanisms and disease modeling.

Authors:  Xinyu Zhao; Darcie L Moore
Journal:  Cell Tissue Res       Date:  2018-01       Impact factor: 5.249

4.  Identification and characterization of occult human-specific LINE-1 insertions using long-read sequencing technology.

Authors:  Weichen Zhou; Sarah B Emery; Diane A Flasch; Yifan Wang; Kenneth Y Kwan; Jeffrey M Kidd; John V Moran; Ryan E Mills
Journal:  Nucleic Acids Res       Date:  2020-02-20       Impact factor: 16.971

Review 5.  Review of Design Considerations for Brain-on-a-Chip Models.

Authors:  Tiffany Cameron; Tanya Bennet; Elyn M Rowe; Mehwish Anwer; Cheryl L Wellington; Karen C Cheung
Journal:  Micromachines (Basel)       Date:  2021-04-15       Impact factor: 2.891

6.  Evolutionarily conservative and non-conservative regulatory networks during primate interneuron development revealed by single-cell RNA and ATAC sequencing.

Authors:  Ziqi Zhao; Dan Zhang; Fuqiang Yang; Mingrui Xu; Shaoli Zhao; Taotao Pan; Chuanyu Liu; Yongjie Liu; Qingfeng Wu; Qiang Tu; Ping Zhou; Rong Li; Jia Kang; Lan Zhu; Fei Gao; Yaqing Wang; Zhiheng Xu
Journal:  Cell Res       Date:  2022-03-10       Impact factor: 46.297

  6 in total

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