Literature DB >> 21451514

Long-term single-cell imaging of mammalian stem cells.

Timm Schroeder1.   

Abstract

Continuous long-term single-cell observation provides insight into the molecular control of cell fate. This is particularly important for rare and heterogeneous populations of cells, such as mammalian stem cells. The current lack of usable off-the-shelf hardware and software for such experiments makes their implementation technically challenging. Here I discuss the need for continuous single-cell quantification to understand molecular cell fate control as well as organizational and technical solutions for long-term imaging and tracking of stem cells.

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Year:  2011        PMID: 21451514     DOI: 10.1038/nmeth.1577

Source DB:  PubMed          Journal:  Nat Methods        ISSN: 1548-7091            Impact factor:   28.547


  49 in total

Review 1.  Fluorescent protein-cell labeling and its application in time-lapse analysis of hematopoietic differentiation.

Authors:  Matthias Stadtfeld; Florencio Varas; Thomas Graf
Journal:  Methods Mol Med       Date:  2005

2.  Intermediate-term hematopoietic stem cells with extended but time-limited reconstitution potential.

Authors:  Patricia Benveniste; Catherine Frelin; Salima Janmohamed; Mary Barbara; Robert Herrington; Deborah Hyam; Norman N Iscove
Journal:  Cell Stem Cell       Date:  2010-01-08       Impact factor: 24.633

3.  Lentiviral vector design and imaging approaches to visualize the early stages of cellular reprogramming.

Authors:  Eva Warlich; Johannes Kuehle; Tobias Cantz; Martijn H Brugman; Tobias Maetzig; Melanie Galla; Adam A Filipczyk; Stephan Halle; Hannes Klump; Hans R Schöler; Christopher Baum; Timm Schroeder; Axel Schambach
Journal:  Mol Ther       Date:  2011-02-01       Impact factor: 11.454

Review 4.  Hematopoietic stem cell heterogeneity: subtypes, not unpredictable behavior.

Authors:  Timm Schroeder
Journal:  Cell Stem Cell       Date:  2010-03-05       Impact factor: 24.633

5.  Computational prediction of neural progenitor cell fates.

Authors:  Andrew R Cohen; Francisco L A F Gomes; Badrinath Roysam; Michel Cayouette
Journal:  Nat Methods       Date:  2010-02-07       Impact factor: 28.547

6.  Generation of subtype-specific neurons from postnatal astroglia of the mouse cerebral cortex.

Authors:  Christophe Heinrich; Sergio Gascón; Giacomo Masserdotti; Alexandra Lepier; Rodrigo Sanchez; Tatiana Simon-Ebert; Timm Schroeder; Magdalena Götz; Benedikt Berninger
Journal:  Nat Protoc       Date:  2011-02-03       Impact factor: 13.491

7.  Transcriptome-wide noise controls lineage choice in mammalian progenitor cells.

Authors:  Hannah H Chang; Martin Hemberg; Mauricio Barahona; Donald E Ingber; Sui Huang
Journal:  Nature       Date:  2008-05-22       Impact factor: 49.962

Review 8.  Systems biology of stem cell fate and cellular reprogramming.

Authors:  Ben D Macarthur; Avi Ma'ayan; Ihor R Lemischka
Journal:  Nat Rev Mol Cell Biol       Date:  2009-09-09       Impact factor: 94.444

9.  Functional properties of neurons derived from in vitro reprogrammed postnatal astroglia.

Authors:  Benedikt Berninger; Marcos R Costa; Ursula Koch; Timm Schroeder; Bernd Sutor; Benedikt Grothe; Magdalena Götz
Journal:  J Neurosci       Date:  2007-08-08       Impact factor: 6.167

10.  Identification of stem cells in small intestine and colon by marker gene Lgr5.

Authors:  Nick Barker; Johan H van Es; Jeroen Kuipers; Pekka Kujala; Maaike van den Born; Miranda Cozijnsen; Andrea Haegebarth; Jeroen Korving; Harry Begthel; Peter J Peters; Hans Clevers
Journal:  Nature       Date:  2007-10-14       Impact factor: 49.962

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  62 in total

1.  Non-invasive long-term and real-time analysis of endocrine cells on micro-electrode arrays.

Authors:  Matthieu Raoux; Yannick Bornat; Adam Quotb; Bogdan Catargi; Sylvie Renaud; Jochen Lang
Journal:  J Physiol       Date:  2011-12-23       Impact factor: 5.182

2.  Using an adherent cell culture of the mouse subependymal zone to study the behavior of adult neural stem cells on a single-cell level.

Authors:  Felipe Ortega; Marcos R Costa; Tatiana Simon-Ebert; Timm Schroeder; Magdalena Götz; Benedikt Berninger
Journal:  Nat Protoc       Date:  2011-11-03       Impact factor: 13.491

3.  Microfluidic single-cell real-time PCR for comparative analysis of gene expression patterns.

Authors:  Veronica Sanchez-Freire; Antje D Ebert; Tomer Kalisky; Stephen R Quake; Joseph C Wu
Journal:  Nat Protoc       Date:  2012-04-05       Impact factor: 13.491

4.  The ePetri dish, an on-chip cell imaging platform based on subpixel perspective sweeping microscopy (SPSM).

Authors:  Guoan Zheng; Seung Ah Lee; Yaron Antebi; Michael B Elowitz; Changhuei Yang
Journal:  Proc Natl Acad Sci U S A       Date:  2011-10-03       Impact factor: 11.205

5.  Direct metabolomics for plant cells by live single-cell mass spectrometry.

Authors:  Takashi Fujii; Shuichi Matsuda; Mónica Lorenzo Tejedor; Tsuyoshi Esaki; Iwao Sakane; Hajime Mizuno; Naohiro Tsuyama; Tsutomu Masujima
Journal:  Nat Protoc       Date:  2015-08-27       Impact factor: 13.491

6.  Network plasticity of pluripotency transcription factors in embryonic stem cells.

Authors:  Adam Filipczyk; Carsten Marr; Simon Hastreiter; Justin Feigelman; Michael Schwarzfischer; Philipp S Hoppe; Dirk Loeffler; Konstantinos D Kokkaliaris; Max Endele; Bernhard Schauberger; Oliver Hilsenbeck; Stavroula Skylaki; Jan Hasenauer; Konstantinos Anastassiadis; Fabian J Theis; Timm Schroeder
Journal:  Nat Cell Biol       Date:  2015-09-21       Impact factor: 28.824

7.  The CellBorderTracker, a novel tool to quantitatively analyze spatiotemporal endothelial junction dynamics at the subcellular level.

Authors:  Jochen Seebach; Abdallah Abu Taha; Janine Lenk; Nico Lindemann; Xiaoyi Jiang; Klaus Brinkmann; Sven Bogdan; Hans-Joachim Schnittler
Journal:  Histochem Cell Biol       Date:  2015-08-15       Impact factor: 4.304

Review 8.  Unravelling stem cell dynamics by lineage tracing.

Authors:  Cédric Blanpain; Benjamin D Simons
Journal:  Nat Rev Mol Cell Biol       Date:  2013-07-17       Impact factor: 94.444

Review 9.  Single-cell analysis of diversity in human stem cell-derived neurons.

Authors:  Lise J Harbom; Nadine Michel; Michael J McConnell
Journal:  Cell Tissue Res       Date:  2017-11-29       Impact factor: 5.249

Review 10.  Plasticity of tumour and immune cells: a source of heterogeneity and a cause for therapy resistance?

Authors:  Michael Hölzel; Anton Bovier; Thomas Tüting
Journal:  Nat Rev Cancer       Date:  2013-03-28       Impact factor: 60.716

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