Literature DB >> 29171062

Mixture drug-count response model for the high-dimensional drug combinatory effect on myopathy.

Xueying Wang1,2, Pengyue Zhang2, Chien-Wei Chiang2, Hengyi Wu2, Li Shen2,3, Xia Ning2,4, Donglin Zeng5, Lei Wang1,2,6, Sara K Quinney2,7,8, Weixing Feng1, Lang Li2,6,9.   

Abstract

Drug-drug interactions (DDIs) are a common cause of adverse drug events (ADEs). The electronic medical record (EMR) database and the FDA's adverse event reporting system (FAERS) database are the major data sources for mining and testing the ADE associated DDI signals. Most DDI data mining methods focus on pair-wise drug interactions, and methods to detect high-dimensional DDIs in medical databases are lacking. In this paper, we propose 2 novel mixture drug-count response models for detecting high-dimensional drug combinations that induce myopathy. The "count" indicates the number of drugs in a combination. One model is called fixed probability mixture drug-count response model with a maximum risk threshold (FMDRM-MRT). The other model is called count-dependent probability mixture drug-count response model with a maximum risk threshold (CMDRM-MRT), in which the mixture probability is count dependent. Compared with the previous mixture drug-count response model (MDRM) developed by our group, these 2 new models show a better likelihood in detecting high-dimensional drug combinatory effects on myopathy. CMDRM-MRT identified and validated (54; 374; 637; 442; 131) 2-way to 6-way drug interactions, respectively, which induce myopathy in both EMR and FAERS databases. We further demonstrate FAERS data capture much higher maximum myopathy risk than EMR data do. The consistency of 2 mixture models' parameters and local false discovery rate estimates are evaluated through statistical simulation studies.
Copyright © 2017 John Wiley & Sons, Ltd.

Entities:  

Keywords:  FDA's adverse event reporting system; drug-count response model; electronic medical record; high-dimensional drug interactions; myopathy

Mesh:

Year:  2017        PMID: 29171062      PMCID: PMC5771837          DOI: 10.1002/sim.7545

Source DB:  PubMed          Journal:  Stat Med        ISSN: 0277-6715            Impact factor:   2.373


  30 in total

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2.  A Bayesian neural network method for adverse drug reaction signal generation.

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3.  Signal detection in FDA AERS database using Dirichlet process.

Authors:  Na Hu; Lan Huang; Ram C Tiwari
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4.  Combing signals from spontaneous reports and electronic health records for detection of adverse drug reactions.

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Review 5.  Pharmacoepidemiologic Methods for Studying the Health Effects of Drug-Drug Interactions.

Authors:  S Hennessy; C E Leonard; J J Gagne; J H Flory; X Han; C M Brensinger; W B Bilker
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6.  Likelihood ratio based tests for longitudinal drug safety data.

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7.  Detecting drug interactions from adverse-event reports: interaction between paroxetine and pravastatin increases blood glucose levels.

Authors:  N P Tatonetti; J C Denny; S N Murphy; G H Fernald; G Krishnan; V Castro; P Yue; P S Tsao; P S Tsau; I Kohane; D M Roden; R B Altman
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Review 8.  Novel data-mining methodologies for adverse drug event discovery and analysis.

Authors:  R Harpaz; W DuMouchel; N H Shah; D Madigan; P Ryan; C Friedman
Journal:  Clin Pharmacol Ther       Date:  2012-06       Impact factor: 6.875

Review 9.  Novel statistical tools for monitoring the safety of marketed drugs.

Authors:  J S Almenoff; E N Pattishall; T G Gibbs; W DuMouchel; S J W Evans; N Yuen
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10.  Adverse drug reactions in hospital in-patients: a prospective analysis of 3695 patient-episodes.

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Journal:  PLoS One       Date:  2009-02-11       Impact factor: 3.240

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3.  Analyzing adverse drug reaction using statistical and machine learning methods: A systematic review.

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4.  Propensity score-adjusted three-component mixture model for drug-drug interaction data mining in FDA Adverse Event Reporting System.

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5.  Random control selection for conducting high-throughput adverse drug events screening using large-scale longitudinal health data.

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