Literature DB >> 29159991

Journey to the centre of the cell: Virtual reality immersion into scientific data.

Angus P R Johnston1,2, James Rae3,4, Nicholas Ariotti3, Benjamin Bailey5,6, Andrew Lilja5,6, Robyn Webb7, Charles Ferguson3,4, Sheryl Maher1, Thomas P Davis1,2,8, Richard I Webb7, John McGhee5,6, Robert G Parton3,4,7.   

Abstract

Visualization of scientific data is crucial not only for scientific discovery but also to communicate science and medicine to both experts and a general audience. Until recently, we have been limited to visualizing the three-dimensional (3D) world of biology in 2 dimensions. Renderings of 3D cells are still traditionally displayed using two-dimensional (2D) media, such as on a computer screen or paper. However, the advent of consumer grade virtual reality (VR) headsets such as Oculus Rift and HTC Vive means it is now possible to visualize and interact with scientific data in a 3D virtual world. In addition, new microscopic methods provide an unprecedented opportunity to obtain new 3D data sets. In this perspective article, we highlight how we have used cutting edge imaging techniques to build a 3D virtual model of a cell from serial block-face scanning electron microscope (SBEM) imaging data. This model allows scientists, students and members of the public to explore and interact with a "real" cell. Early testing of this immersive environment indicates a significant improvement in students' understanding of cellular processes and points to a new future of learning and public engagement. In addition, we speculate that VR can become a new tool for researchers studying cellular architecture and processes by populating VR models with molecular data.
© 2017 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

Entities:  

Keywords:  educational resources; electron microscopy; endocytosis; virtual reality

Mesh:

Year:  2017        PMID: 29159991     DOI: 10.1111/tra.12538

Source DB:  PubMed          Journal:  Traffic        ISSN: 1398-9219            Impact factor:   6.215


  8 in total

Review 1.  Applying Modern Virtual and Augmented Reality Technologies to Medical Images and Models.

Authors:  Justin Sutherland; Jason Belec; Adnan Sheikh; Leonid Chepelev; Waleed Althobaity; Benjamin J W Chow; Dimitrios Mitsouras; Andy Christensen; Frank J Rybicki; Daniel J La Russa
Journal:  J Digit Imaging       Date:  2019-02       Impact factor: 4.056

2.  Peppy: A virtual reality environment for exploring the principles of polypeptide structure.

Authors:  David G Doak; Gareth S Denyer; Juliet A Gerrard; Joel P Mackay; Jane R Allison
Journal:  Protein Sci       Date:  2019-11-11       Impact factor: 6.725

3.  Expression of TRPC1 and SBEM protein in breast cancer tissue and its relationship with clinicopathological features and prognosis of patients.

Authors:  Yongqing Zhang; Xiaoqin Lun; Weiling Guo
Journal:  Oncol Lett       Date:  2020-10-29       Impact factor: 2.967

Review 4.  Molecular Visualization on the Holodeck.

Authors:  Thomas D Goddard; Alan A Brilliant; Thomas L Skillman; Steven Vergenz; James Tyrwhitt-Drake; Elaine C Meng; Thomas E Ferrin
Journal:  J Mol Biol       Date:  2018-06-28       Impact factor: 5.469

5.  Cellular sociology regulates the hierarchical spatial patterning and organization of cells in organisms.

Authors:  Shambavi Ganesh; Beliz Utebay; Jeremy Heit; Ahmet F Coskun
Journal:  Open Biol       Date:  2020-12-16       Impact factor: 6.411

6.  Virtual reality and augmented reality in radiation oncology education - A review and expert commentary.

Authors:  David L Kok; Sathana Dushyanthen; Gabrielle Peters; Daniel Sapkaroski; Michelle Barrett; Jenny Sim; Jesper Grau Eriksen
Journal:  Tech Innov Patient Support Radiat Oncol       Date:  2022-09-16

7.  Application of Virtual Reality Based on 3D-CTA in Intracranial Aneurysm Surgery.

Authors:  Zhilei Li; Guojin Huo; Yi Feng; Zhulin Ma
Journal:  J Healthc Eng       Date:  2021-05-29       Impact factor: 2.682

8.  A Virtual Tour of the Cell: Impact of Virtual Reality on Student Learning and Engagement in the STEM Classroom.

Authors:  Jennifer A Bennett; Colin P Saunders
Journal:  J Microbiol Biol Educ       Date:  2019-07-26
  8 in total

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