Literature DB >> 2915921

DNA bending and binding factors of the human beta-actin promoter.

T Kawamoto1, K Makino, S Orita, A Nakata, T Kakunaga.   

Abstract

Transcription of the beta-actin gene is rapidly inducible in response to serum stimulation. To determine the regions responsible for serum inducible and basal level expression, the human beta-actin promoter was subjected to mutational analysis. Two distinct elements, the CCAAT homology and the beta-actin specific conserved sequences, were found by a chloramphenicol acetyltransferase expression assay and sequence comparisons, and then analyzed for possible functions. Using a DNA bend assay, it was shown that the conserved sequences included the core of a sequence-directed bend of DNA. Gel mobility shift and DNase I protection assays revealed that the conserved sequences and the CCAAT homology were recognized by binding factors in HeLa cell extracts.

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Year:  1989        PMID： 2915921      PMCID： PMC331601          DOI： 10.1093/nar/17.2.523

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  40 in total

1.  Multiple basal elements of a human hsp70 promoter function differently in human and rodent cell lines.

Authors:  J M Greene; Z Larin; I C Taylor; H Prentice; K A Gwinn; R E Kingston
Journal:  Mol Cell Biol       Date:  1987-10       Impact factor: 4.272

2.  Sequence-induced DNA curvature at the bacteriophage lambda origin of replication.

Authors:  K Zahn; F R Blattner
Journal:  Nature       Date:  1985 Oct 3-9       Impact factor: 49.962

3.  Homologous recognition of a promoter domain common to the MSV LTR and the HSV tk gene.

Authors:  B J Graves; P F Johnson; S L McKnight
Journal:  Cell       Date:  1986-02-28       Impact factor: 41.582

Review 4.  Transcriptional selectivity of viral genes in mammalian cells.

Authors:  S McKnight; R Tjian
Journal:  Cell       Date:  1986-09-12       Impact factor: 41.582

5.  Physical characterization of a kinetoplast DNA fragment with unusual properties.

Authors:  J C Marini; P N Effron; T C Goodman; C K Singleton; R D Wells; R M Wartell; P T Englund
Journal:  J Biol Chem       Date:  1984-07-25       Impact factor: 5.157

6.  Static bend of DNA helix at the activator recognition site of the ompF promoter in Escherichia coli.

Authors:  T Mizuno
Journal:  Gene       Date:  1987       Impact factor: 3.688

7.  Induction of c-fos gene and protein by growth factors precedes activation of c-myc.

Authors:  R Müller; R Bravo; J Burckhardt; T Curran
Journal:  Nature       Date:  1984 Dec 20-1985 Jan 2       Impact factor: 49.962

8.  Sequence-directed bends of DNA helix axis at the upstream activation sites of alpha-cell-specific genes in yeast.

Authors:  K Inokuchi; A Nakayama; F Hishinuma
Journal:  Nucleic Acids Res       Date:  1988-07-25       Impact factor: 16.971

9.  Evolution of the functional human beta-actin gene and its multi-pseudogene family: conservation of noncoding regions and chromosomal dispersion of pseudogenes.

Authors:  S Y Ng; P Gunning; R Eddy; P Ponte; J Leavitt; T Shows; L Kedes
Journal:  Mol Cell Biol       Date:  1985-10       Impact factor: 4.272

10.  Two transcriptional activators, CCAAT-box-binding transcription factor and heat shock transcription factor, interact with a human hsp70 gene promoter.

Authors:  W D Morgan; G T Williams; R I Morimoto; J Greene; R E Kingston; R Tjian
Journal:  Mol Cell Biol       Date:  1987-03       Impact factor: 4.272
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  15 in total

1.  A common feature shared by bent DNA structures locating in the eukaryotic promoter region.

Authors:  M Miyano; T Kawashima; T Ohyama
Journal:  Mol Biol Rep       Date:  2001-03       Impact factor: 2.316

2.  Left-handedly curved DNA regulates accessibility to cis-DNA elements in chromatin.

Authors:  Jun-ichi Nishikawa; Miho Amano; Yoshiro Fukue; Shigeo Tanaka; Haruka Kishi; Yoshiko Hirota; Kinya Yoda; Takashi Ohyama
Journal:  Nucleic Acids Res       Date:  2003-11-15       Impact factor: 16.971

3.  Identification of single-stranded-DNA-binding proteins that interact with muscle gene elements.

Authors:  I M Santoro; T M Yi; K Walsh
Journal:  Mol Cell Biol       Date:  1991-04       Impact factor: 4.272

4.  Alteration of the curved helical structure located in the upstream region of the beta-lactamase promoter of plasmid pUC19 and its effect on transcription.

Authors:  T Ohyama; M Nagumo; Y Hirota; S Sakuma
Journal:  Nucleic Acids Res       Date:  1992-04-11       Impact factor: 16.971

5.  Cloning, characterization, and transcriptional activity of β-actin promoter of African catfish (Clarias gariepinus).

Authors:  Maocang Yan; Guangxu Liu; Sanghyok Ri; Wenho Hwang; Sangryong Ri; Wei Shi; Yu Han; Yu Tang; Lining Zhang
Journal:  Mol Biol Rep       Date:  2021-04-07       Impact factor: 2.316

6.  Characterization of cis-acting elements regulating transcription from the promoter of a constitutively active rice actin gene.

Authors:  Y Wang; W Zhang; J Cao; D McElroy; R Wu
Journal:  Mol Cell Biol       Date:  1992-08       Impact factor: 4.272

7.  Hydroxyl radical footprints reveal novel structural features around the NF I binding site in adenovirus DNA.

Authors:  H Zorbas; L Rogge; M Meisterernst; E L Winnacker
Journal:  Nucleic Acids Res       Date:  1989-10-11       Impact factor: 16.971

8.  Transcription factor binding and spacing constraints in the human beta-actin proximal promoter.

Authors:  S L Danilition; R M Frederickson; C Y Taylor; N G Miyamoto
Journal:  Nucleic Acids Res       Date:  1991-12-25       Impact factor: 16.971

9.  Constitutive expression of the urokinase plasminogen activator gene in murine RAW264 macrophages involves distal and 5' non-coding sequences that are conserved between mouse and pig.

Authors:  A I Cassady; K J Stacey; K A Nimmo; K M Murphy; D von der Ahe; D Pearson; F M Botteri; Y Nagamine; D A Hume
Journal:  Nucleic Acids Res       Date:  1991-12-25       Impact factor: 16.971

10.  Repeat units from a maize rDNA external spacer region exhibit DNA curvature and interact with high-mobility-group proteins.

Authors:  E A Griess; K D Grasser; G Feix
Journal:  Planta       Date:  1993       Impact factor: 4.116
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