Literature DB >> 29157493

Atomic resolution conformational dynamics of intrinsically disordered proteins from NMR spin relaxation.

Nicola Salvi1, Anton Abyzov1, Martin Blackledge2.   

Abstract

Nuclear magnetic resonance (NMR) spectroscopy is one of the most powerful experimental approaches for investigating the conformational behaviour of intrinsically disordered proteins (IDPs). IDPs represent a significant fraction of all proteomes, and, despite their importance for understanding fundamental biological processes, the molecular basis of their activity still remains largely unknown. The functional mechanisms exploited by IDPs in their interactions with other biomolecules are defined by their intrinsic dynamic modes and associated timescales, justifying the considerable interest over recent years in the development of technologies adapted to measure and describe this behaviour. NMR spin relaxation delivers information-rich, site-specific data reporting on conformational fluctuations occurring throughout the molecule. Here we review recent progress in the use of 15N relaxation to identify local backbone dynamics and long-range chain-like motions in unfolded proteins.
Copyright © 2017 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Activation energy; Arrhenius relationship; Intrinsically disordered protein; Nuclear magnetic resonance; Protein dynamics; Segmental motion; Spin relaxation

Mesh:

Substances:

Year:  2017        PMID: 29157493     DOI: 10.1016/j.pnmrs.2017.06.001

Source DB:  PubMed          Journal:  Prog Nucl Magn Reson Spectrosc        ISSN: 0079-6565            Impact factor:   9.795


  10 in total

1.  FBP21's C-Terminal Domain Remains Dynamic When Wrapped around the c-Sec63 Unit of Brr2 Helicase.

Authors:  Jana Sticht; Miriam Bertazzon; Lisa M Henning; Jan R Licha; Esam T Abualrous; Christian Freund
Journal:  Biophys J       Date:  2018-11-29       Impact factor: 4.033

Review 2.  Chemical shift-based methods in NMR structure determination.

Authors:  Santrupti Nerli; Andrew C McShan; Nikolaos G Sgourakis
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2018-03-11       Impact factor: 9.795

Review 3.  Conformational Dynamics of Intrinsically Disordered Proteins Regulate Biomolecular Condensate Chemistry.

Authors:  Anton Abyzov; Martin Blackledge; Markus Zweckstetter
Journal:  Chem Rev       Date:  2022-02-18       Impact factor: 60.622

4.  Structural Model of the Proline-Rich Domain of Huntingtin Exon-1 Fibrils.

Authors:  Alexander S Falk; José M Bravo-Arredondo; Jobin Varkey; Sayuri Pacheco; Ralf Langen; Ansgar B Siemer
Journal:  Biophys J       Date:  2020-10-20       Impact factor: 4.033

Review 5.  Looking at the Disordered Proteins through the Computational Microscope.

Authors:  Payel Das; Silvina Matysiak; Jeetain Mittal
Journal:  ACS Cent Sci       Date:  2018-03-22       Impact factor: 14.553

6.  Connecting Coil-to-Globule Transitions to Full Phase Diagrams for Intrinsically Disordered Proteins.

Authors:  Xiangze Zeng; Alex S Holehouse; Ashutosh Chilkoti; Tanja Mittag; Rohit V Pappu
Journal:  Biophys J       Date:  2020-06-23       Impact factor: 4.033

7.  A proline switch explains kinetic heterogeneity in a coupled folding and binding reaction.

Authors:  Franziska Zosel; Davide Mercadante; Daniel Nettels; Benjamin Schuler
Journal:  Nat Commun       Date:  2018-08-20       Impact factor: 14.919

8.  Reorientational Dynamics of Amyloid-β from NMR Spin Relaxation and Molecular Simulation.

Authors:  Nasrollah Rezaei-Ghaleh; Giacomo Parigi; Markus Zweckstetter
Journal:  J Phys Chem Lett       Date:  2019-06-06       Impact factor: 6.475

9.  Solvent-dependent segmental dynamics in intrinsically disordered proteins.

Authors:  Nicola Salvi; Anton Abyzov; Martin Blackledge
Journal:  Sci Adv       Date:  2019-06-28       Impact factor: 14.136

10.  Entropy and Information within Intrinsically Disordered Protein Regions.

Authors:  Iva Pritišanac; Robert M Vernon; Alan M Moses; Julie D Forman Kay
Journal:  Entropy (Basel)       Date:  2019-07-06       Impact factor: 2.524

  10 in total

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