Literature DB >> 29149466

Microsecond Timescale Protein Dynamics: a Combined Solid-State NMR Approach.

Petra Rovó1,2, Rasmus Linser1,2.   

Abstract

Conformational exchange in proteins is a major determinant in protein functionality. In particular, the μs-ms timescale is associated with enzymatic activity and interactions between biological molecules. We show here that a comprehensive data set of R1ρ relaxation dispersion profiles employing multiple effective fields and tilt angles can be easily obtained in perdeuterated, partly back-exchanged proteins at fast magic-angle spinning and further complemented with chemical-exchange saturation transfer NMR experiments. The approach exploits complementary sources of information and enables the extraction of multiple exchange parameters for μs-ms timescale conformational exchange, most notably including the sign of the chemical shift differences between the ground and excited states.
© 2018 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Keywords:  exchange parameters; protein dynamics; proton detection; relaxation dispersion; solid-state NMR

Mesh:

Substances:

Year:  2017        PMID: 29149466     DOI: 10.1002/cphc.201701238

Source DB:  PubMed          Journal:  Chemphyschem        ISSN: 1439-4235            Impact factor:   3.102


  11 in total

1.  Mechanistic Insights into Microsecond Time-Scale Motion of Solid Proteins Using Complementary 15N and 1H Relaxation Dispersion Techniques.

Authors:  Petra Rovó; Colin A Smith; Diego Gauto; Bert L de Groot; Paul Schanda; Rasmus Linser
Journal:  J Am Chem Soc       Date:  2019-01-08       Impact factor: 15.419

2.  Solid-state NMR reveals a comprehensive view of the dynamics of the flexible, disordered N-terminal domain of amyloid-β fibrils.

Authors:  Dan Fai Au; Dmitry Ostrovsky; Riqiang Fu; Liliya Vugmeyster
Journal:  J Biol Chem       Date:  2019-02-08       Impact factor: 5.157

3.  Aromatic Ring Dynamics, Thermal Activation, and Transient Conformations of a 468 kDa Enzyme by Specific 1H-13C Labeling and Fast Magic-Angle Spinning NMR.

Authors:  Diego F Gauto; Pavel Macek; Alessandro Barducci; Hugo Fraga; Audrey Hessel; Tsutomu Terauchi; David Gajan; Yohei Miyanoiri; Jerome Boisbouvier; Roman Lichtenecker; Masatsune Kainosho; Paul Schanda
Journal:  J Am Chem Soc       Date:  2019-07-05       Impact factor: 15.419

4.  Microsecond Protein Dynamics from Combined Bloch-McConnell and Near-Rotary-Resonance R1p Relaxation-Dispersion MAS NMR.

Authors:  Dominique Marion; Diego F Gauto; Isabel Ayala; Karine Giandoreggio-Barranco; Paul Schanda
Journal:  Chemphyschem       Date:  2018-12-20       Impact factor: 3.102

5.  Deuteron Solid-State NMR Relaxation Measurements Reveal Two Distinct Conformational Exchange Processes in the Disordered N-Terminal Domain of Amyloid-β Fibrils.

Authors:  Liliya Vugmeyster; Dan Fai Au; Dmitry Ostrovsky; Riqiang Fu
Journal:  Chemphyschem       Date:  2019-06-14       Impact factor: 3.102

6.  Deuteron rotating frame relaxation for the detection of slow motions in rotating solids.

Authors:  Liliya Vugmeyster; Dmitry Ostrovsky; Alexander Greenwood; Riqiang Fu
Journal:  J Magn Reson       Date:  2022-02-19       Impact factor: 2.229

Review 7.  1H-Detected Biomolecular NMR under Fast Magic-Angle Spinning.

Authors:  Tanguy Le Marchand; Tobias Schubeis; Marta Bonaccorsi; Piotr Paluch; Daniela Lalli; Andrew J Pell; Loren B Andreas; Kristaps Jaudzems; Jan Stanek; Guido Pintacuda
Journal:  Chem Rev       Date:  2022-05-10       Impact factor: 72.087

8.  Conformational Dynamics in the Core of Human Y145Stop Prion Protein Amyloid Probed by Relaxation Dispersion NMR.

Authors:  Matthew D Shannon; Theint Theint; Dwaipayan Mukhopadhyay; Krystyna Surewicz; Witold K Surewicz; Dominique Marion; Paul Schanda; Christopher P Jaroniec
Journal:  Chemphyschem       Date:  2018-11-07       Impact factor: 3.102

Review 9.  Recent developments in deuterium solid-state NMR for the detection of slow motions in proteins.

Authors:  Liliya Vugmeyster
Journal:  Solid State Nucl Magn Reson       Date:  2021-01-07       Impact factor: 2.293

10.  Quantifying Microsecond Exchange in Large Protein Complexes with Accelerated Relaxation Dispersion Experiments in the Solid State.

Authors:  Carl Öster; Simone Kosol; Józef R Lewandowski
Journal:  Sci Rep       Date:  2019-07-31       Impact factor: 4.379

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