| Literature DB >> 29148252 |
Chao-Wen Cheng1, Che-Chang Chang2,3,4, Yudha Nur Patria1,5, Ruei-Ting Chang2, Yun-Ru Liu6, Fu-An Li7, Hsiu-Ming Shih2,7, Ching-Yu Lin8.
Abstract
The use of blood plasma biomarkers in gastric cancer (GC) management is limited due to a lack of reliable biomarkers. An LC-MS/MS assay and a bioinformatic analysis were performed to identify blood plasma biomarkers in a GC discovery cohort. The data obtained were verified and validated by western blotting and an ELISA in an independent study cohort. A label-free quantification analysis of the MS data using PEAKS7 software found that four plasma proteins of apolipoprotein C-1, gelsolin, sex hormone-binding globulin (SHBG), and complement component C4-A were significantly overexpressed in GC patients. A western blot assay of these plasma proteins showed that only SHBG was consistently overexpressed in the patient group. ELISA measurement of SHBG blood plasma levels confirmed that the patient group had significantly higher SHBG levels than the control group. SHBG levels in the patient group remained significantly higher after being stratified by gender, age, and disease stage. These findings show that LC-MS/MS is powerful and highly sensitive for plasma biomarker discovery, and SHBG could be a potential plasma biomarker for GC management.Entities:
Keywords: zzm321990SHBGzzm321990; Gastric cancer; LC-MS/MS; mass spectrometry; proteomics
Mesh:
Substances:
Year: 2017 PMID: 29148252 PMCID: PMC5773940 DOI: 10.1002/cam4.1254
Source DB: PubMed Journal: Cancer Med ISSN: 2045-7634 Impact factor: 4.452
Figure 1Experimental outline.
Characteristics of subjects in three study cohorts
| Characteristics | Biomarker Discovery cohort | Verification study cohort | Validation study cohort | |||
|---|---|---|---|---|---|---|
| Normal subjects | Gastric cancer patients | Normal subjects | Gastric cancer patients | Normal subjects | Gastric cancer patients | |
| Total subjects | 9 | 24 | 9 | 24 | 68 | 50 |
| Male (%) | 6 (67%) | 16 (67%) | 6 (67%) | 15 (63%) | 44 (65%) | 33 (66%) |
| Male–female ratio | 2:1 | 2:1 | 2:1 | 1.7:1 | 1.83:1 | 1.94:1 |
| Median age (years) | 44 | 59 | 44 | 74 | 32 | 51 |
| Men (average) | 43.5 | 59.5 | 43.5 | 74 | 33.7 | 49 |
| Women (average) | 44 | 57 | 44 | 71.5 | 31 | 47.7 |
| Stage I (average) | — | 56.5 | — | 70 | — | 45.3 |
| Stage II (average) | — | 63.5 | — | 77 | — | 53.9 |
| Stage III (average) | — | 55 | — | 73 | — | 47 |
| Stage IV (average) | — | 60.5 | — | 62 | — | 49.9 |
The upregulated proteins in plasma gastric cancer patients identified using LC‐MS/MS
| Gene ID | UniProt accession number | Significance (‐10lgP) | Coverage (%) | The best unique peptide sequence | Retention time average | m/z |
|---|---|---|---|---|---|---|
| APOC1 | P02654 | 49.02 | 39 | MREWFSETFQK | 53.04 | 496.9 |
| TPDVSSALDKLKEFGNTLEDK | 71.76 | 577.5 | ||||
| TPDVSSALDKLK | 47.82 | 425.2 | ||||
| DVSSALDKLKEFGNTLEDK | 70.39 | 528.0 | ||||
| GSN | P06396 | 33.84 | 4 | VPFDAATLHTSTAMAAQHGMDDDGTGQK | 47.82 | 719.1 |
| SHBG | P04278 | 31.56 | 3 | IALGGLLFPASNLR | 79.02 | 721.4 |
| C4A | P0C0L4 | 25.74 | 3 | PVAFSVVPTAAAAVSLK | 68.78 | 814.5 |
APOC1, apolipoprotein C‐I; GSN, gelsolin; SHBG, sex hormone‐binding globulin; C4A, complement C4‐A.
Figure 2Heat map generated from a PEAKS7 software analysis with the average relative intensity as a reference.
Figure 3Quantitative analysis of western blotting results of apolipoprotein C‐1 (APOC1) (A), gelsolin (GSN) (B), sex hormone‐binding globulin (SHBG) (C), and complement component C4‐A (C4A) (D) from the verification study cohort. Western blotting images of SHBG (E) are grouped into control and patient groups. The patient group was further divided into four different cancer stages. Human light‐chain immunoglobulin was used as a loading control, and the human light‐chain immunoglobulin blotting signal of N1 was used to normalize the human light‐chain immunoglobulin blotting signal from each sample. The normalized human light‐chain immunoglobulin of each sample was used to calculate the normalized SHBG blotting signal of each sample. Data were analyzed with the Mann–Whitney U‐test.
Figure 4ELISA measurement results of plasma sex hormone‐binding globulin (SHBG) from the validation study cohort. ELISA results were compared between patients and healthy control subjects (A) and were stratified by age (B), gender (C), and disease stage (D). All panels are presented as box plots showing the median value (line), the interquartile range (box), and Tukey whiskers embracing data within 1.5‐fold of the interquartile range; all data outside the range of the Tukey whiskers are presented as individual data points.