Literature DB >> 29134190

Locally adaptive magnetic resonance intensity models for unsupervised segmentation of multiple sclerosis lesions.

Alfiia Galimzianova1,2, Žiga Lesjak1, Daniel L Rubin2, Boštjan Likar1,3, Franjo Pernuš1, Žiga Špiclin1,3.   

Abstract

Multiple sclerosis (MS) is a neurological disease characterized by focal lesions and morphological changes in the brain captured on magnetic resonance (MR) images. However, extraction of the corresponding imaging markers requires accurate segmentation of normal-appearing brain structures (NABS) and the lesions in MR images. On MR images of healthy brains, the NABS can be accurately captured by MR intensity mixture models, which, in combination with regularization techniques, such as in Markov random field (MRF) models, are known to give reliable NABS segmentation. However, on MR images that also contain abnormalities such as MS lesions, obtaining an accurate and reliable estimate of NABS intensity models is a challenge. We propose a method for automated segmentation of normal-appearing and abnormal structures in brain MR images that is based on a locally adaptive NABS model, a robust model parameters estimation method, and an MRF-based segmentation framework. Experiments on multisequence brain MR images of 30 MS patients show that, compared to whole-brain MR intensity model and compared to four popular unsupervised lesion segmentation methods, the proposed method increases the accuracy of MS lesion segmentation.

Entities:  

Keywords:  locally adaptive models; multiple sclerosis; unsupervised segmentation

Year:  2017        PMID: 29134190      PMCID: PMC5665678          DOI: 10.1117/1.JMI.5.1.011007

Source DB:  PubMed          Journal:  J Med Imaging (Bellingham)        ISSN: 2329-4302


  18 in total

1.  Magnetic resonance image tissue classification using a partial volume model.

Authors:  D W Shattuck; S R Sandor-Leahy; K A Schaper; D A Rottenberg; R M Leahy
Journal:  Neuroimage       Date:  2001-05       Impact factor: 6.556

2.  Distributed local MRF models for tissue and structure brain segmentation.

Authors:  Benoit Scherrer; Florence Forbes; Catherine Garbay; Michel Dojat
Journal:  IEEE Trans Med Imaging       Date:  2009-02-18       Impact factor: 10.048

3.  elastix: a toolbox for intensity-based medical image registration.

Authors:  Stefan Klein; Marius Staring; Keelin Murphy; Max A Viergever; Josien P W Pluim
Journal:  IEEE Trans Med Imaging       Date:  2009-11-17       Impact factor: 10.048

4.  Adaptive non-local means denoising of MR images with spatially varying noise levels.

Authors:  José V Manjón; Pierrick Coupé; Luis Martí-Bonmatí; D Louis Collins; Montserrat Robles
Journal:  J Magn Reson Imaging       Date:  2010-01       Impact factor: 4.813

5.  Statistical approach to segmentation of single-channel cerebral MR images.

Authors:  J C Rajapakse; J N Giedd; J L Rapoport
Journal:  IEEE Trans Med Imaging       Date:  1997-04       Impact factor: 10.048

6.  N4ITK: improved N3 bias correction.

Authors:  Nicholas J Tustison; Brian B Avants; Philip A Cook; Yuanjie Zheng; Alexander Egan; Paul A Yushkevich; James C Gee
Journal:  IEEE Trans Med Imaging       Date:  2010-04-08       Impact factor: 10.048

7.  Automated segmentation of multiple sclerosis lesions by model outlier detection.

Authors:  K Van Leemput; F Maes; D Vandermeulen; A Colchester; P Suetens
Journal:  IEEE Trans Med Imaging       Date:  2001-08       Impact factor: 10.048

8.  Trimmed-likelihood estimation for focal lesions and tissue segmentation in multisequence MRI for multiple sclerosis.

Authors:  Daniel García-Lorenzo; Sylvain Prima; Douglas L Arnold; D Louis Collins; Christian Barillot
Journal:  IEEE Trans Med Imaging       Date:  2011-02-14       Impact factor: 10.048

9.  A topology-preserving approach to the segmentation of brain images with multiple sclerosis lesions.

Authors:  Navid Shiee; Pierre-Louis Bazin; Arzu Ozturk; Daniel S Reich; Peter A Calabresi; Dzung L Pham
Journal:  Neuroimage       Date:  2009-09-17       Impact factor: 6.556

10.  Diagnostic criteria for multiple sclerosis: 2010 revisions to the McDonald criteria.

Authors:  Chris H Polman; Stephen C Reingold; Brenda Banwell; Michel Clanet; Jeffrey A Cohen; Massimo Filippi; Kazuo Fujihara; Eva Havrdova; Michael Hutchinson; Ludwig Kappos; Fred D Lublin; Xavier Montalban; Paul O'Connor; Magnhild Sandberg-Wollheim; Alan J Thompson; Emmanuelle Waubant; Brian Weinshenker; Jerry S Wolinsky
Journal:  Ann Neurol       Date:  2011-02       Impact factor: 10.422

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  1 in total

Review 1.  Automatic brain lesion segmentation on standard magnetic resonance images: a scoping review.

Authors:  Emilia Gryska; Justin Schneiderman; Isabella Björkman-Burtscher; Rolf A Heckemann
Journal:  BMJ Open       Date:  2021-01-29       Impact factor: 2.692

  1 in total

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