Literature DB >> 21324773

Trimmed-likelihood estimation for focal lesions and tissue segmentation in multisequence MRI for multiple sclerosis.

Daniel García-Lorenzo1, Sylvain Prima, Douglas L Arnold, D Louis Collins, Christian Barillot.   

Abstract

We present a new automatic method for segmentation of multiple sclerosis (MS) lesions in magnetic resonance images. The method performs tissue classification using a model of intensities of the normal appearing brain tissues. In order to estimate the model, a trimmed likelihood estimator is initialized with a hierarchical random approach in order to be robust to MS lesions and other outliers present in real images. The algorithm is first evaluated with simulated images to assess the importance of the robust estimator in presence of outliers. The method is then validated using clinical data in which MS lesions were delineated manually by several experts. Our method obtains an average Dice similarity coefficient (DSC) of 0.65, which is close to the average DSC obtained by raters (0.66).

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Year:  2011        PMID: 21324773      PMCID: PMC3326634          DOI: 10.1109/TMI.2011.2114671

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  33 in total

1.  Adaptive segmentation of MRI data.

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Journal:  IEEE Trans Med Imaging       Date:  1996       Impact factor: 10.048

2.  An optimized blockwise nonlocal means denoising filter for 3-D magnetic resonance images.

Authors:  P Coupe; P Yger; S Prima; P Hellier; C Kervrann; C Barillot
Journal:  IEEE Trans Med Imaging       Date:  2008-04       Impact factor: 10.048

3.  Maximum-likelihood estimation of Rician distribution parameters.

Authors:  J Sijbers; A J den Dekker; P Scheunders; D Van Dyck
Journal:  IEEE Trans Med Imaging       Date:  1998-06       Impact factor: 10.048

4.  A nonparametric method for automatic correction of intensity nonuniformity in MRI data.

Authors:  J G Sled; A P Zijdenbos; A C Evans
Journal:  IEEE Trans Med Imaging       Date:  1998-02       Impact factor: 10.048

5.  Unbiased average age-appropriate atlases for pediatric studies.

Authors:  Vladimir Fonov; Alan C Evans; Kelly Botteron; C Robert Almli; Robert C McKinstry; D Louis Collins
Journal:  Neuroimage       Date:  2010-07-23       Impact factor: 6.556

6.  Quantification of MRI lesion load in multiple sclerosis: a comparison of three computer-assisted techniques.

Authors:  J Grimaud; M Lai; J Thorpe; P Adeleine; L Wang; G J Barker; D L Plummer; P S Tofts; W I McDonald; D H Miller
Journal:  Magn Reson Imaging       Date:  1996       Impact factor: 2.546

7.  Computer-assisted segmentation of white matter lesions in 3D MR images using support vector machine.

Authors:  Zhiqiang Lao; Dinggang Shen; Dengfeng Liu; Abbas F Jawad; Elias R Melhem; Lenore J Launer; R Nick Bryan; Christos Davatzikos
Journal:  Acad Radiol       Date:  2008-03       Impact factor: 3.173

Review 8.  Role of MRI in multiple sclerosis I: inflammation and lesions.

Authors:  Robert Zivadinov; Rohit Bakshi
Journal:  Front Biosci       Date:  2004-01-01

9.  Automatic segmentation and classification of multiple sclerosis in multichannel MRI.

Authors:  Ayelet Akselrod-Ballin; Meirav Galun; John Moshe Gomori; Massimo Filippi; Paola Valsasina; Ronen Basri; Achi Brandt
Journal:  IEEE Trans Biomed Eng       Date:  2009-10       Impact factor: 4.538

Review 10.  Biomarkers and surrogate outcomes in neurodegenerative disease: lessons from multiple sclerosis.

Authors:  David H Miller
Journal:  NeuroRx       Date:  2004-04
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  16 in total

1.  Longitudinal multiple sclerosis lesion segmentation: Resource and challenge.

Authors:  Aaron Carass; Snehashis Roy; Amod Jog; Jennifer L Cuzzocreo; Elizabeth Magrath; Adrian Gherman; Julia Button; James Nguyen; Ferran Prados; Carole H Sudre; Manuel Jorge Cardoso; Niamh Cawley; Olga Ciccarelli; Claudia A M Wheeler-Kingshott; Sébastien Ourselin; Laurence Catanese; Hrishikesh Deshpande; Pierre Maurel; Olivier Commowick; Christian Barillot; Xavier Tomas-Fernandez; Simon K Warfield; Suthirth Vaidya; Abhijith Chunduru; Ramanathan Muthuganapathy; Ganapathy Krishnamurthi; Andrew Jesson; Tal Arbel; Oskar Maier; Heinz Handels; Leonardo O Iheme; Devrim Unay; Saurabh Jain; Diana M Sima; Dirk Smeets; Mohsen Ghafoorian; Bram Platel; Ariel Birenbaum; Hayit Greenspan; Pierre-Louis Bazin; Peter A Calabresi; Ciprian M Crainiceanu; Lotta M Ellingsen; Daniel S Reich; Jerry L Prince; Dzung L Pham
Journal:  Neuroimage       Date:  2017-01-11       Impact factor: 6.556

2.  Automatic segmentation and volumetric quantification of white matter hyperintensities on fluid-attenuated inversion recovery images using the extreme value distribution.

Authors:  Rui Wang; Chao Li; Jie Wang; Xiaoer Wei; Yuehua Li; Yuemin Zhu; Su Zhang
Journal:  Neuroradiology       Date:  2014-11-19       Impact factor: 2.804

3.  Locally adaptive magnetic resonance intensity models for unsupervised segmentation of multiple sclerosis lesions.

Authors:  Alfiia Galimzianova; Žiga Lesjak; Daniel L Rubin; Boštjan Likar; Franjo Pernuš; Žiga Špiclin
Journal:  J Med Imaging (Bellingham)       Date:  2017-11-01

4.  Robust regression based genome-wide multi-trait QTL analysis.

Authors:  Md Jahangir Alam; Janardhan Mydam; Md Ripter Hossain; S M Shahinul Islam; Md Nurul Haque Mollah
Journal:  Mol Genet Genomics       Date:  2021-06-25       Impact factor: 3.291

5.  A hybrid approach based on logistic classification and iterative contrast enhancement algorithm for hyperintense multiple sclerosis lesion segmentation.

Authors:  Antonio Carlos da Silva Senra Filho
Journal:  Med Biol Eng Comput       Date:  2017-11-18       Impact factor: 2.602

6.  A Model of Population and Subject (MOPS) Intensities With Application to Multiple Sclerosis Lesion Segmentation.

Authors:  Xavier Tomas-Fernandez; Simon K Warfield
Journal:  IEEE Trans Med Imaging       Date:  2015-01-19       Impact factor: 10.048

7.  Reproducibility of Lesion Count in Various Subregions on MRI Scans in Multiple Sclerosis.

Authors:  Bence Bozsik; Eszter Tóth; Ilona Polyák; Fanni Kerekes; Nikoletta Szabó; Krisztina Bencsik; Péter Klivényi; Zsigmond Tamás Kincses
Journal:  Front Neurol       Date:  2022-05-10       Impact factor: 4.086

8.  Semi-automatic segmentation of brain tumors using population and individual information.

Authors:  Yao Wu; Wei Yang; Jun Jiang; Shuanqian Li; Qianjin Feng; Wufan Chen
Journal:  J Digit Imaging       Date:  2013-08       Impact factor: 4.056

9.  Increasing the contrast of the brain MR FLAIR images using fuzzy membership functions and structural similarity indices in order to segment MS lesions.

Authors:  Ahmad Bijar; Rasoul Khayati; Antonio Peñalver Benavent
Journal:  PLoS One       Date:  2013-06-17       Impact factor: 3.240

10.  A comprehensive approach to the segmentation of multichannel three-dimensional MR brain images in multiple sclerosis.

Authors:  Sushmita Datta; Ponnada A Narayana
Journal:  Neuroimage Clin       Date:  2013-01-11       Impact factor: 4.881

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