Literature DB >> 29133454

Protoenzymes: the case of hyperbranched polyesters.

Irena Mamajanov1,2, George D Cody2.   

Abstract

Enzymes are biopolymeric complexes that catalyse biochemical reactions and shape metabolic pathways. Enzymes usually work with small molecule cofactors that actively participate in reaction mechanisms and complex, usually globular, polymeric structures capable of specific substrate binding, encapsulation and orientation. Moreover, the globular structures of enzymes possess cavities with modulated microenvironments, facilitating the progression of reaction(s). The globular structure is ensured by long folded protein or RNA strands. Synthesis of such elaborate complexes has proven difficult under prebiotically plausible conditions. We explore here that catalysis may have been performed by alternative polymeric structures, namely hyperbranched polymers. Hyperbranched polymers are relatively complex structures that can be synthesized under prebiotically plausible conditions; their globular structure is ensured by virtue of their architecture rather than folding. In this study, we probe the ability of tertiary amine-bearing hyperbranched polyesters to form hydrophobic pockets as a reaction-promoting medium for the Kemp elimination reaction. Our results show that polyesters formed upon reaction between glycerol, triethanolamine and organic acid containing hydrophobic groups, i.e. adipic and methylsuccinic acid, are capable of increasing the rate of Kemp elimination by a factor of up to 3 over monomeric triethanolamine.This article is part of the themed issue 'Reconceptualizing the origins of life'.
© 2017 The Author(s).

Entities:  

Keywords:  functional polymers; hyperbranched polymers; messy chemistry; origin of life; protoenzyme; synzyme

Mesh:

Substances:

Year:  2017        PMID: 29133454      PMCID: PMC5686411          DOI: 10.1098/rsta.2016.0357

Source DB:  PubMed          Journal:  Philos Trans A Math Phys Eng Sci        ISSN: 1364-503X            Impact factor:   4.226


  20 in total

1.  Dendritic catalysts and dendrimers in catalysis.

Authors:  D Astruc; F Chardac
Journal:  Chem Rev       Date:  2001-09       Impact factor: 60.622

2.  From non-random molecular structure to life and mind.

Authors:  S W Fox
Journal:  J Mol Struct       Date:  1989       Impact factor: 3.196

3.  CATALYTIC DECOMPOSITION OF GLUCOSE IN AQUEOUS SOLUTION BY THERMAL PROTEINOIDS.

Authors:  S W FOX; G KRAMPITZ
Journal:  Nature       Date:  1964-09-26       Impact factor: 49.962

4.  Titan tholins: simulating Titan organic chemistry in the Cassini-Huygens era.

Authors:  Morgan L Cable; Sarah M Hörst; Robert Hodyss; Patricia M Beauchamp; Mark A Smith; Peter A Willis
Journal:  Chem Rev       Date:  2011-11-17       Impact factor: 60.622

5.  Triggered release from peptide-proteinoid microspheres.

Authors:  Stephen Quirk
Journal:  J Biomed Mater Res A       Date:  2010-03-01       Impact factor: 4.396

6.  Growth of organic microspherules in sugar-ammonia reactions.

Authors:  Arthur L Weber
Journal:  Orig Life Evol Biosph       Date:  2005-12       Impact factor: 1.950

Review 7.  The origin of life and the origin of enzymes.

Authors:  A I Oparin
Journal:  Adv Enzymol Relat Areas Mol Biol       Date:  1965

Review 8.  Exonucleolytic proofreading.

Authors:  T A Kunkel
Journal:  Cell       Date:  1988-06-17       Impact factor: 41.582

9.  Peptide formation in the prebiotic era: thermal condensation of glycine in fluctuating clay environments.

Authors:  N Lahav; D White; S Chang
Journal:  Science       Date:  1978-07-07       Impact factor: 47.728

Review 10.  Multi-stage proofreading in DNA replication.

Authors:  R A Beckman; L A Loeb
Journal:  Q Rev Biophys       Date:  1993-08       Impact factor: 5.318

View more
  2 in total

1.  Wet-Dry Cycling Delays the Gelation of Hyperbranched Polyesters: Implications to the Origin of Life.

Authors:  Irena Mamajanov
Journal:  Life (Basel)       Date:  2019-07-01

2.  Polyesters as a Model System for Building Primitive Biologies from Non-Biological Prebiotic Chemistry.

Authors:  Kuhan Chandru; Irena Mamajanov; H James Cleaves; Tony Z Jia
Journal:  Life (Basel)       Date:  2020-01-19
  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.