Literature DB >> 29125756

Hepatitis B Virus Capsid Completion Occurs through Error Correction.

Corinne A Lutomski1, Nicholas A Lyktey1, Zhongchao Zhao2, Elizabeth E Pierson1, Adam Zlotnick2, Martin F Jarrold1.   

Abstract

Understanding capsid assembly is important because of its role in virus lifecycles and in applications to drug discovery and nanomaterial development. Many virus capsids are icosahedral, and assembly is thought to occur by the sequential addition of capsid protein subunits to a nucleus, with the final step completing the icosahedron. Almost nothing is known about the final (completion) step because the techniques usually used to study capsid assembly lack the resolution. In this work, charge detection mass spectrometry (CDMS) has been used to track the assembly of the T = 4 hepatitis B virus (HBV) capsid in real time. The initial assembly reaction occurs rapidly, on the time scale expected from low resolution measurements. However, CDMS shows that many of the particles generated in this process are defective and overgrown, containing more than the 120 capsid protein dimers needed to form a perfect T = 4 icosahedron. The defective and overgrown capsids self-correct over time to the mass expected for a perfect T = 4 capsid. Thus, completion is a distinct phase in the assembly reaction. Capsid completion does not necessarily occur by inserting the last building block into an incomplete, but otherwise perfect icosahedron. The initial assembly reaction can be predominently imperfect, and completion involves the slow correction of the accumulated errors.

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Year:  2017        PMID: 29125756      PMCID: PMC6336459          DOI: 10.1021/jacs.7b09932

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  30 in total

1.  Characterization of Virus Capsids and Their Assembly Intermediates by Multicycle Resistive-Pulse Sensing with Four Pores in Series.

Authors:  Jinsheng Zhou; Panagiotis Kondylis; Daniel G Haywood; Zachary D Harms; Lye Siang Lee; Adam Zlotnick; Stephen C Jacobson
Journal:  Anal Chem       Date:  2018-05-29       Impact factor: 6.986

2.  Charge Detection Mass Spectrometry Measurements of Exosomes and other Extracellular Particles Enriched from Bovine Milk.

Authors:  Brooke A Brown; Xuyao Zeng; Aaron R Todd; Lauren F Barnes; Jonathan M A Winstone; Jonathan C Trinidad; Milos V Novotny; Martin F Jarrold; David E Clemmer
Journal:  Anal Chem       Date:  2020-02-07       Impact factor: 6.986

3.  Assembly Reactions of Hepatitis B Capsid Protein into Capsid Nanoparticles Follow a Narrow Path through a Complex Reaction Landscape.

Authors:  Roi Asor; Lisa Selzer; Christopher John Schlicksup; Zhongchao Zhao; Adam Zlotnick; Uri Raviv
Journal:  ACS Nano       Date:  2019-06-25       Impact factor: 15.881

4.  Fundamental Studies of New Ionization Technologies and Insights from IMS-MS.

Authors:  Sarah Trimpin; Ellen D Inutan; Santosh Karki; Efstathios A Elia; Wen-Jing Zhang; Steffen M Weidner; Darrell D Marshall; Khoa Hoang; Chuping Lee; Eric T J Davis; Veronica Smith; Anil K Meher; Mario A Cornejo; Gregory W Auner; Charles N McEwen
Journal:  J Am Soc Mass Spectrom       Date:  2019-05-06       Impact factor: 3.109

5.  Local Stabilization of Subunit-Subunit Contacts Causes Global Destabilization of Hepatitis B Virus Capsids.

Authors:  Christopher John Schlicksup; Patrick Laughlin; Steven Dunkelbarger; Joseph Che-Yen Wang; Adam Zlotnick
Journal:  ACS Chem Biol       Date:  2020-05-19       Impact factor: 5.100

6.  Should Virus Capsids Assemble Perfectly? Theory and Observation of Defects.

Authors:  Justin Spiriti; James F Conway; Daniel M Zuckerman
Journal:  Biophys J       Date:  2020-09-28       Impact factor: 4.033

7.  Collision-Induced Unfolding Is Sensitive to the Polarity of Proteins and Protein Complexes.

Authors:  Seoyeon Hong; Matthew F Bush
Journal:  J Am Soc Mass Spectrom       Date:  2019-09-09       Impact factor: 3.109

8.  Structural Differences between the Woodchuck Hepatitis Virus Core Protein in the Dimer and Capsid States Are Consistent with Entropic and Conformational Regulation of Assembly.

Authors:  Zhongchao Zhao; Joseph Che-Yen Wang; Giovanni Gonzalez-Gutierrez; Balasubramanian Venkatakrishnan; Roi Asor; Daniel Khaykelson; Uri Raviv; Adam Zlotnick
Journal:  J Virol       Date:  2019-06-28       Impact factor: 5.103

9.  Optimized Electrostatic Linear Ion Trap for Charge Detection Mass Spectrometry.

Authors:  Joanna A Hogan; Martin F Jarrold
Journal:  J Am Soc Mass Spectrom       Date:  2018-07-09       Impact factor: 3.109

10.  Evolution of Intermediates during Capsid Assembly of Hepatitis B Virus with Phenylpropenamide-Based Antivirals.

Authors:  Panagiotis Kondylis; Christopher J Schlicksup; Sarah P Katen; Lye Siang Lee; Adam Zlotnick; Stephen C Jacobson
Journal:  ACS Infect Dis       Date:  2019-02-04       Impact factor: 5.084

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