Literature DB >> 29124424

Effects of gravel-sand mulching on soil bacterial community and metabolic capability in the semi-arid Loess Plateau, China.

Haiting Hao1,2,3, Xia Zhao1,2,3, Yun Wang4,3, Yubao Zhang1,2,3, Zhongkui Xie1,2,3, Zhihong Guo1,2,3, Ruoyu Wang5,6,7.   

Abstract

Gravel and sand mulching is an indigenous technology used for the crop yield for at least 300 years in the loess area of northwest China; however, little is known about the changes of soil bacterial community and metabolic capability under the mulching. In this study, we investigated the soil microbial community structure and metabolic functional diversity during mulching using Illumina MiSeq sequencing and Biolog ECO method. Totally, 9417 OTUs were classified at 97% similarity level for soil samples after 0 (control), 4, 7, and 10 years of mulching. Dendrogram result indicated that mulching affected the soil bacterial community; and the higher richness and diversity of bacterial community were detected in mulching samples. The average abundance of soil bacteria (such as Proteobacteria, Actinobacteria, Firmicutes and Nitrospirae) in mulching samples was higher than samples without mulching. Besides, some microbial communities (such as Rhodobacteraceae, Phenylobacterium, Pseudonocardia, Nonomuraea and Aeromicrobium) were only present in the mulched soil samples. However, the lower metabolic capability was observed in mulching samples based on Biolog method, which the main reason for the opposite result might be that the soil objects detected by the two methods are different. In conclusion, these results demonstrated that gravel and sand mulching affected the structure and metabolic capability of bacterial community and was one reason for crop yield.

Keywords:  Bacterial community structure; Cultivated soil; Gravel and sand mulching; High-throughput sequencing; Metabolic diversity

Mesh:

Substances:

Year:  2017        PMID: 29124424     DOI: 10.1007/s11274-017-2367-6

Source DB:  PubMed          Journal:  World J Microbiol Biotechnol        ISSN: 0959-3993            Impact factor:   3.312


  17 in total

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Journal:  Appl Environ Microbiol       Date:  2006-07       Impact factor: 4.792

2.  Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy.

Authors:  Qiong Wang; George M Garrity; James M Tiedje; James R Cole
Journal:  Appl Environ Microbiol       Date:  2007-06-22       Impact factor: 4.792

3.  Analysis of microbial community functional diversity using sole-carbon-source utilisation profiles - a critique.

Authors:  Juliet Preston-Mafham; Lynne Boddy; Peter F Randerson
Journal:  FEMS Microbiol Ecol       Date:  2002-10-01       Impact factor: 4.194

4.  Production of the antibiotic phenazine-1-carboxylic Acid by fluorescent pseudomonas species in the rhizosphere of wheat.

Authors:  L S Thomashow; D M Weller; R F Bonsall; L S Pierson
Journal:  Appl Environ Microbiol       Date:  1990-04       Impact factor: 4.792

5.  FLASH: fast length adjustment of short reads to improve genome assemblies.

Authors:  Tanja Magoč; Steven L Salzberg
Journal:  Bioinformatics       Date:  2011-09-07       Impact factor: 6.937

6.  Estimating the population size for capture-recapture data with unequal catchability.

Authors:  A Chao
Journal:  Biometrics       Date:  1987-12       Impact factor: 2.571

7.  QIIME allows analysis of high-throughput community sequencing data.

Authors:  J Gregory Caporaso; Justin Kuczynski; Jesse Stombaugh; Kyle Bittinger; Frederic D Bushman; Elizabeth K Costello; Noah Fierer; Antonio Gonzalez Peña; Julia K Goodrich; Jeffrey I Gordon; Gavin A Huttley; Scott T Kelley; Dan Knights; Jeremy E Koenig; Ruth E Ley; Catherine A Lozupone; Daniel McDonald; Brian D Muegge; Meg Pirrung; Jens Reeder; Joel R Sevinsky; Peter J Turnbaugh; William A Walters; Jeremy Widmann; Tanya Yatsunenko; Jesse Zaneveld; Rob Knight
Journal:  Nat Methods       Date:  2010-04-11       Impact factor: 28.547

8.  Differential growth responses of soil bacterial taxa to carbon substrates of varying chemical recalcitrance.

Authors:  Katherine C Goldfarb; Ulas Karaoz; China A Hanson; Clark A Santee; Mark A Bradford; Kathleen K Treseder; Matthew D Wallenstein; Eoin L Brodie
Journal:  Front Microbiol       Date:  2011-05-02       Impact factor: 5.640

9.  Microbial Functional Diversity, Biomass and Activity as Affected by Soil Surface Mulching in a Semiarid Farmland.

Authors:  Yufang Shen; Yingying Chen; Shiqing Li
Journal:  PLoS One       Date:  2016-07-14       Impact factor: 3.240

10.  Functional diversity of microbial communities in soils in the vicinity of Wanda Glacier, Antarctic Peninsula.

Authors:  Igor Stelmach Pessi; Susana de Oliveira Elias; Felipe Lorenz Simões; Jefferson Cardia Simões; Alexandre José Macedo
Journal:  Microbes Environ       Date:  2012       Impact factor: 2.912

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  2 in total

1.  Effects of organic fertilizer proportion on the distribution of soil aggregates and their associated organic carbon in a field mulched with gravel.

Authors:  Shaoping Du; Zhongming Ma; Juan Chen; Liang Xue; Chaonan Tang; Tawheed M E Shareef; Kadambot H M Siddique
Journal:  Sci Rep       Date:  2022-07-07       Impact factor: 4.996

2.  Influence of coal gangue mulching with various thicknesses and particle sizes on soil water characteristics.

Authors:  Xiu-Na Han; Ying Dong; Yu-Qing Geng; Na Li; Chao-Ying Zhang
Journal:  Sci Rep       Date:  2021-07-28       Impact factor: 4.379

  2 in total

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