Literature DB >> 29117171

Accounting for sex in the genome.

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Abstract

Genetic association studies of the human genome often omit the X chromosome because of the unique analytical challenges it presents. A concerted effort to undo this exclusion could offer medically relevant insights into basic biology that might otherwise be missed.

Entities:  

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Year:  2017        PMID： 29117171     DOI： 10.1038/nm.4445

Source DB:  PubMed          Journal:  Nat Med        ISSN： 1078-8956            Impact factor:   53.440


  9 in total

1.  eXclusion: toward integrating the X chromosome in genome-wide association analyses.

Authors:  Anastasia L Wise; Lin Gyi; Teri A Manolio
Journal:  Am J Hum Genet       Date:  2013-05-02       Impact factor: 11.025

Review 2.  Coronary Artery Disease: Why We should Consider the Y Chromosome.

Authors:  Elsa Molina; Elyse Michele Clarence; Farah Ahmady; Guat Siew Chew; Fadi Joseph Charchar
Journal:  Heart Lung Circ       Date:  2016-02-09       Impact factor: 2.975

3.  Cosmc is an X-linked inflammatory bowel disease risk gene that spatially regulates gut microbiota and contributes to sex-specific risk.

Authors:  Matthew R Kudelka; Benjamin H Hinrichs; Trevor Darby; Carlos S Moreno; Hikaru Nishio; Christopher E Cutler; Jianmei Wang; Huixia Wu; Junwei Zeng; Yingchun Wang; Tongzhong Ju; Sean R Stowell; Asma Nusrat; Rheinallt M Jones; Andrew S Neish; Richard D Cummings
Journal:  Proc Natl Acad Sci U S A       Date:  2016-12-07       Impact factor: 11.205

4.  Sex-specific transcriptional signatures in human depression.

Authors:  Benoit Labonté; Olivia Engmann; Immanuel Purushothaman; Caroline Menard; Junshi Wang; Chunfeng Tan; Joseph R Scarpa; Gregory Moy; Yong-Hwee E Loh; Michael Cahill; Zachary S Lorsch; Peter J Hamilton; Erin S Calipari; Georgia E Hodes; Orna Issler; Hope Kronman; Madeline Pfau; Aleksandar L J Obradovic; Yan Dong; Rachael L Neve; Scott Russo; Andrew Kazarskis; Carol Tamminga; Naguib Mechawar; Gustavo Turecki; Bin Zhang; Li Shen; Eric J Nestler
Journal:  Nat Med       Date:  2017-08-21       Impact factor: 53.440

5.  Accounting for eXentricities: analysis of the X chromosome in GWAS reveals X-linked genes implicated in autoimmune diseases.

Authors:  Diana Chang; Feng Gao; Andrea Slavney; Li Ma; Yedael Y Waldman; Aaron J Sams; Paul Billing-Ross; Aviv Madar; Richard Spritz; Alon Keinan
Journal:  PLoS One       Date:  2014-12-05       Impact factor: 3.240

6.  Impact of the X Chromosome and sex on regulatory variation.

Authors:  Kimberly R Kukurba; Princy Parsana; Brunilda Balliu; Kevin S Smith; Zachary Zappala; David A Knowles; Marie-Julie Favé; Joe R Davis; Xin Li; Xiaowei Zhu; James B Potash; Myrna M Weissman; Jianxin Shi; Anshul Kundaje; Douglas F Levinson; Philip Awadalla; Sara Mostafavi; Alexis Battle; Stephen B Montgomery
Journal:  Genome Res       Date:  2016-04-21       Impact factor: 9.043

7.  The landscape of sex-differential transcriptome and its consequent selection in human adults.

Authors:  Moran Gershoni; Shmuel Pietrokovski
Journal:  BMC Biol       Date:  2017-02-07       Impact factor: 7.431

8.  Biochemical characterization of functional domains of the chaperone Cosmc.

Authors:  Melinda S Hanes; Kelley W Moremen; Richard D Cummings
Journal:  PLoS One       Date:  2017-06-30       Impact factor: 3.240

9.  XWAS: A Software Toolset for Genetic Data Analysis and Association Studies of the X Chromosome.

Authors:  Feng Gao; Diana Chang; Arjun Biddanda; Li Ma; Yingjie Guo; Zilu Zhou; Alon Keinan
Journal:  J Hered       Date:  2015-08-12       Impact factor: 2.645
  9 in total
  13 in total

1.  Crowdsourced genealogies and genomes.

Authors:  Alexandre A Lussier; Alon Keinan
Journal:  Science       Date:  2018-04-13       Impact factor: 47.728

2.  Impact of sex and histology on the therapeutic effects of fluoropyrimidines and oxaliplatin plus bevacizumab for patients with metastatic colorectal cancer in the SOFT trial.

Authors:  Yasuhide Yamada; Kei Muro; Keiichi Takahashi; Hideo Baba; Yoshito Komatsu; Taroh Satoh; Masahiro Goto; Hideyuki Mishima; Masahiko Watanabe; Yuh Sakata; Satoshi Morita; Yasuhiro Shimada; Naruhito Takenaka; Tadashi Hirooka; Kenichi Sugihara
Journal:  Glob Health Med       Date:  2020-08-31

Review 3.  Lymphatic Function and Dysfunction in the Context of Sex Differences.

Authors:  Claire E Trincot; Kathleen M Caron
Journal:  ACS Pharmacol Transl Sci       Date:  2019-09-09

Review 4.  Sex Differences in Neurodegeneration: The Role of the Immune System in Humans.

Authors:  Chloe Lopez-Lee; Lay Kodama; Li Gan
Journal:  Biol Psychiatry       Date:  2021-01-08       Impact factor: 13.382

Review 5.  Sex disparity in cancer: roles of microRNAs and related functional players.

Authors:  Alessandra Carè; Maria Bellenghi; Paola Matarrese; Lucia Gabriele; Stefano Salvioli; Walter Malorni
Journal:  Cell Death Differ       Date:  2018-01-19       Impact factor: 15.828

6.  Effects of X-chromosome Tenomodulin Genetic Variants on Obesity in a Children's Cohort and Implications of the Gene in Adipocyte Metabolism.

Authors:  Francisco Javier Ruiz-Ojeda; Augusto Anguita-Ruiz; Azahara I Rupérez; Carolina Gomez-Llorente; Josune Olza; Rocío Vázquez-Cobela; Mercedes Gil-Campos; Gloria Bueno; Rosaura Leis; Ramón Cañete; Luis A Moreno; Angel Gil; Concepcion Maria Aguilera
Journal:  Sci Rep       Date:  2019-03-08       Impact factor: 4.379

7.  Sex differences in the safety of S-1 plus oxaliplatin and S-1 plus cisplatin for patients with metastatic gastric cancer.

Authors:  Yasuhide Yamada; Wasaburo Koizumi; Kazuhiro Nishikawa; Masahiro Gotoh; Nozomu Fuse; Naotoshi Sugimoto; Tomohiro Nishina; Kenji Amagai; Keisho Chin; Yasumasa Niwa; Akihito Tsuji; Hiroshi Imamura; Masahiro Tsuda; Hirofumi Yasui; Hirofumi Fujii; Kensei Yamaguchi; Hisateru Yasui; Shuichi Hironaka; Ken Shimada; Ichinosuke Hyodo
Journal:  Cancer Sci       Date:  2019-07-23       Impact factor: 6.716

Review 8.  Probably Correct: Rescuing Repeats with Short and Long Reads.

Authors:  Monika Cechova
Journal:  Genes (Basel)       Date:  2020-12-31       Impact factor: 4.096

9.  Sex-stratified genome-wide association study of multisite chronic pain in UK Biobank.

Authors:  Keira J A Johnston; Joey Ward; Pradipta R Ray; Mark J Adams; Andrew M McIntosh; Blair H Smith; Rona J Strawbridge; Theodore J Price; Daniel J Smith; Barbara I Nicholl; Mark E S Bailey
Journal:  PLoS Genet       Date:  2021-04-08       Impact factor: 5.917

10.  Identification of a Locus on the X Chromosome Linked to Familial Membranous Nephropathy.

Authors:  Mallory L Downie; Sanjana Gupta; Mehmet C Tekman; Chris Cheshire; Steven Arora; Christoph Licht; Lisa A Robinson; Marina Munoz; Alvaro Madrid Aris; Ibrahim Al Attrach; Paul E Brenchley; Daniel P Gale; Horia Stanescu; Detlef Bockenhauer; Robert Kleta
Journal:  Kidney Int Rep       Date:  2021-03-03
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