| Literature DB >> 29115104 |
Atefeh Valaei1, Morteza Karimipoor1, Alireza Kordafshari1, Sirous Zeinali1,2.
Abstract
Alpha-thalassemia (α-thal) is probably the most prevalent monogenic condition in the world. Deletions are the most common types of mutations in α-thal, followed by point mutations and small insertion/deletion. In the context of national screening program for prevention of thalassemia and hemoglobinopathies in Iran, α-thal carriers have come to more attention. Therefore, the frequency and distribution of α-globin mutations in various regions of the country have been studied in recent years. A comprehensive search was performed in PubMed, Scopus, and national databases for finding reports on mutation detection in α-thal carriers and HbH disease with Iranian origin. The mutation data of 10849 α-thal carriers showed that -α3.7 and α-5NT were the most common deletional and nondeletional mutations, respectively. In HbH disease cases, the -α3.7/--MED was the most prevalent genotype. Overall, 42 different mutations have been identified in α-globin cluster reflecting the high heterogeneity of the mutations in Iranian populations.Entities:
Keywords: α-Thalassemia; Point mutation; HbH disease; Iran
Year: 2018 PMID: 29115104 PMCID: PMC5712386 DOI: 10.22034/ibj.22.1.6
Source DB: PubMed Journal: Iran Biomed J ISSN: 1028-852X
The frequency of mutations causing α-thalassemia in Iranian population
| Province/origin | -α3.7 (%) | -α4.2 | -α20.5 | --MED | CD59 | 5nt | PolyA1 | PolyA2 | Hb CS | CD19 | ND | Rare alleles | Ref |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Mazandaran (north) | 440 (57.1) | 57 (7.4) | 0 | 54 (7.0)1- | 0 | 43 (5.58-) | 13 (1.6-) | 131 (17.01-) | 32 (4.15-) | 0 | 13 (1.6-) | 0 | 29 |
| Gilan (north) | 48 (42.5-) | 5 (4.5-) | 2 (1.77-) | 10 (8.84-) | 1 (0.9-) | 8 (7.07-) | 4 (3.5-) | 14 (12.4-) | 12 (10.6-) | 1 (0.9-) | 9 (7.9-) | 8 (7.07-) | 30 |
| Mazandaran (north) | 123 (45.2-) | 25 (9.1-) | 6 (2.2)% | 12 (4.4-) | 5 (1.8-) | 18 (6.6-) | 4 (1.5-) | 50 (18.3-) | 8 (3-) | 11 (4.04-) | 28 (10.3-) | 10 (3.6-) | 31 |
| Mazandaran (north) | 121 (52.8-) | 11 (4.8-) | 0 | 26 (11).3- | 0 | 10 (4.3-) | 8 (3..5-) | 30 (13.1-) | 15 (6.5-) | 2 (0.87-) | 37 (13.85-) | 6 (2.6-) | 32 |
| Mazandaran (north) | 55 (88.7-) | 5 (8.06-) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 80 (56.3-) | 2 (3.2-) | 33 |
| Mazandaran, Gilan (north) | 591 (53.7-) | 80 (7.2-) | 6 (0.54-) | 89 (8.09-) | 0 | 48 (4.3-) | 21 (1.9-) | 198 (18.01-) | 60 (5.4-) | 0 | 97 (15.2-) | 6 (0.54-) | 34 |
| Tabriz (northwest) | 573 (81.5-) | 37 (5.2-) | 31 (4.4-) | 36 (5.1-) | 0 | 12 (1.7-) | 3 (0.42-) | 8 (1.1-) | 0 | 0 | 606 (-86.2-) | 3 (0.42-) | 35 |
| Tehran | 100 (57.8-) | 7 (4.04-) | 10 (5.8-) | 14 (8.09-) | 0 | 25 (14.4-) | 1 (0.57) | 7 (4.04-) | 6 (3.5-) | 3 (1.7-) | 14 (8.09-) | 0 | 36 |
| Tehran (referral center) | 395 (60.4-) | 46 (7-) | 12 (1.8-) | 30 (4.6-) | 8 (1.2-) | 33 (5-) | 11 (1.7-) | 67 (10.2-) | 22 (3.3-) | 15 (2.3 (- | 3 (0.45-) | 14 (2.1-) | 37 |
| Esfahan (center) | 219 (70.8-) | 15 (4.86-) | 12 (3.9-) | 3 (0.9)7- | 0 | 27 (8.7-) | 5 (1.6-) | 13 (4.2-) | 9 (2.9-) | 5 (1.6-) | 27 (8.03-) | 1 (0.32) | 38 |
| Hormozgan (south) | 91 (79.1-) | 2 (1.7-) | 0 | 0 | 0 | 5 (4.3-) | 0 | 0 | 0 | 14 (12.1-) | 7 (5.7-) | 3 (2.6-) | 39 |
| Kohgiluyeh and Boyer-Ahmad (south) | 857 (71.3-) | 44 (3.7-) | 6 (0.5-) | 23 1.9- | 0 | 84 (6.7-) | 50 (4.1-) | 47 (3.9-) | 45 (3.7-) | 21 (1.7-) | 805 (40.1-) | 24 (2-) | 40 |
| Shiraz (south) | 3185 (68.6-) | 177 (3.8-) | 35 (0.75-) | 99 (2.1-) | 0 | 383 (8.2-) | 141 (3.03-) | 195 (4.2-) | 217 (4.6-) | 182 (3.9-) | 1453 (23.8-) | 25 (0.5-) | 41 |
| Khozestan (southwest) | 70 (84.3-) | 2 (2.46-) | 0 | 6 (7.2-) | 0 | 4 (4.8-) | 0 | 1 (1.2-) | 0 | 0 | 14 (14.4-) | 0 | 42 |
| Khozestan (southwest) | 69 (60.5-) | 8 (7-) | 0 | 9 (7.9-) | 1 (0.87-) | 5 (4.4-) | 2 (1.75-) | 9 (7.9-) | 1 (0.87-) | 5 (4.4-) | 12 (9.5-) | 5 (4.4-) | 43 |
| Khozestan (southwest) | 102 (70.8-) | 2 (1.4-) | 1 (0.7-) | 14 (9.8-) | 0 | 3 (2.1-) | 4 (2.8-) | 1 (0.7-) | 2 (1.4-) | 12 (8.4-) | 2 (1.37-) | 2 (1.4-) | 44 |
| Sistan and Baluchestan (southeast) | 245 (76.5-) | 8 (2.5-) | 0 | 1 (0.3-) | 0 | 53 (16.5-) | 0 | 0 | 0 | 13 (4.06-) | 954 (74.8-) | 0 | 45 |
| Kerman (southeast) | 617 (83.8-) | 27 (3.6-) | 0 | 2 (0.2)7 | 0 | 31 (4.2-) | 4 (0.54-) | 4 (0.54-) | 0 | 42 (5.7-) | 24 (3.1-) | 9 (1.2-) | 46 |
| Kermanshah (west) | 470 (67-) | 23 (3.27-) | 0 | 22 (3.1-) | 17 (2.4-) | 75 (10.6-) | 25 (3.5-) | 70 (9.9)7- | 0 | 0 | 45 (6.02-) | 0 | 47 |
Rare mutations: CD14, IVSI-138, IVSII-148, CD22, CD99, CD108, IVSI-4, Int.codon, anti 3.7, CD26, CD130, CD12, IVSI-116, IVSII-55, 3UTR, CD58, CD24, CD142, CD124, -αST, CD103, CD21, CD16, THAL, FIL, Icaria,CD93-98, ND: not determined;
Samples from different regions of the country
Genotypes in Iranian HbH disease patients
| Mutation | Number (%) | Number (%) | Number (%) | Number (%) |
|---|---|---|---|---|
| 3.7/20.5 | 11 (22.4) | - | 4 (10) | 5 (8) |
| --MED/3.7 | 17 (34.6) | 4 (30.7) | 10 (25) | 21 (32) |
| --MED/C.S | 3 (6.1) | 2 (15.3) | 3 (7.5) | 4 (6) |
| 3.7/unknown | 3 (6.1) | |||
| 20.5/C.S | 1 (2.04) | 1 (2.5) | 3 (4.5) | |
| --MED/5nt | 1 (2.04) | 1 (2.5) | 1 (1.5) | |
| --MED/PolyA2 | 5 (10.2) | 2 (5) | 2 (3) | |
| 20.5/PolyA2 | 3 (6.1) | 2 (5) | 3 (4.5) | |
| --MED /21 bp del | 1 (2.04) | 2 (5) | 2 (3) | |
| --MED/IVSII+4-21ntlNS | 1 (2.04-)-- | |||
| 20.5/CD59 | 2 (4.08) | |||
| 20.5/CD99 | 1 (2.04) | 1 (1.5) | ||
| 5nt/20.5 | 6 (15) | 6 (9) | ||
| 3.7/C.S | 1 (7.69) | |||
| 3.7/T-Saudi | 2 (15.3) | |||
| --MED/T-Turkish | 1 (7.69) | |||
| T-Saudi Homo | 2 (15.3) | |||
| --MED/unknown | 1 (7.69) | |||
| --MED/4.2 | 1 (2.5) | 1 (1.5) | ||
| 3.7/CD19 | 1 (2.5) | |||
| PolyA2/PolyA2 | 3 (7.5) | |||
| PolyA1/PolyA1 | 3 (7.5) | 6 (9) | ||
| C.S/C.S | 1 (2.5) | 1 (1.5) | ||
| --MED/PolyA1 | 3 (4.5) | |||
| 3.7/CD19 | 3 (4.5) | |||
| CD59/--MED | 1 (1.5) | |||
| --MED/CD19 | 1 (1.5) | |||
| 3.7/PolyA1 | 1 (1.5) | |||
| αSun prairie/αSun prairie | 1 (1.5) | |||
| Ref | 48 | 49 | 50 | 51 |