Literature DB >> 29111421

Substitution impact of highly conserved arginine residue at position 75 in GJB1 gene in association with X-linked Charcot-Marie-tooth disease: A computational study.

Ashish Kumar Agrahari1, Amit Kumar2, Siva R1, Hatem Zayed3, George Priya Doss C4.   

Abstract

X-linked Charcot-Marie-Tooth type 1 X (CMTX1) disease is a subtype of Charcot-Marie-Tooth (CMT), which is mainly caused by mutations in the GJB1 gene. It is also known as connexin 32 (Cx32) that leads to Schwann cell abnormalities and peripheral neuropathy. CMTX1 is considered as the second most common form of CMT disease. The aim of this study is to computationally predict the potential impact of different single amino acid substitutions at position 75 of Cx32, from arginine (R) to proline (P), glutamine (Q) and tryptophan (W). This position is known to be highly conserved among the family of connexin. To understand the structural and functional changes due to these single amino acid substitutions, we employed a homology-modeling technique to build the three-dimensional structure models for the native and mutant proteins. The protein structures were further embedded into a POPC lipid bilayer, inserted into a water box, and subjected to molecular dynamics simulation for 50 ns. Our results show that the mutants R75P, R75Q and R75W display variable structural conformation and dynamic behavior compared to the native protein. Our data proves useful in predicting the potential pathogenicity of the mutant proteins and is expected to serve as a platform for drug discovery for patients with CMT.
Copyright © 2017 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Charcot Marie Tooth; GJB1; Molecular Dynamics simulation; Molecular modeling; R75P; R75Q; R75W

Mesh:

Substances:

Year:  2017        PMID: 29111421     DOI: 10.1016/j.jtbi.2017.10.028

Source DB:  PubMed          Journal:  J Theor Biol        ISSN: 0022-5193            Impact factor:   2.691


  9 in total

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Authors:  Ashish Kumar Agrahari; Meghana Muskan; C George Priya Doss; R Siva; Hatem Zayed
Journal:  Metab Brain Dis       Date:  2018-05-27       Impact factor: 3.584

2.  Impact of missense mutations in survival motor neuron protein (SMN1) leading to Spinal Muscular Atrophy (SMA): A computational approach.

Authors:  P Sneha; Tanzila U Zenith; Ummay Salma Abu Habib; Judith Evangeline; D Thirumal Kumar; C George Priya Doss; R Siva; Hatem Zayed
Journal:  Metab Brain Dis       Date:  2018-07-13       Impact factor: 3.584

3.  Computational approach to unravel the impact of missense mutations of proteins (D2HGDH and IDH2) causing D-2-hydroxyglutaric aciduria 2.

Authors:  D Thirumal Kumar; L Jerushah Emerald; C George Priya Doss; P Sneha; R Siva; W Charles Emmanuel Jebaraj; Hatem Zayed
Journal:  Metab Brain Dis       Date:  2018-07-09       Impact factor: 3.655

4.  In Silico Analysis of the L-2-Hydroxyglutarate Dehydrogenase Gene Mutations and Their Biological Impact on Disease Etiology.

Authors:  Muhammad Muzammal; Alessandro Di Cerbo; Eman M Almusalami; Arshad Farid; Muzammil Ahmad Khan; Shakira Ghazanfar; Mohammed Al Mohaini; Abdulkhaliq J Alsalman; Yousef N Alhashem; Maitham A Al Hawaj; Abdulmonem A Alsaleh
Journal:  Genes (Basel)       Date:  2022-04-15       Impact factor: 4.141

5.  The impact of missense mutation in PIGA associated to paroxysmal nocturnal hemoglobinuria and multiple congenital anomalies-hypotonia-seizures syndrome 2: A computational study.

Authors:  Ashish Kumar Agrahari; Enrico Pieroni; Gianluca Gatto; Amit Kumar
Journal:  Heliyon       Date:  2019-10-23

6.  Deciphering the Role of Filamin B Calponin-Homology Domain in Causing the Larsen Syndrome, Boomerang Dysplasia, and Atelosteogenesis Type I Spectrum Disorders via a Computational Approach.

Authors:  Udhaya Kumar S; Srivarshini Sankar; Salma Younes; Thirumal Kumar D; Muneera Naseer Ahmad; Sarah Samer Okashah; Balu Kamaraj; Abeer Mohammed Al-Subaie; George Priya Doss C; Hatem Zayed
Journal:  Molecules       Date:  2020-11-26       Impact factor: 4.411

7.  Whole Exome Sequencing Revealed a Novel GJB1 Pathogenic Variant and a Rare BSCL2 Mutation in Two Iranian Large Pedigrees with Multiple Affected Cases of Charcot-Marie-Tooth.

Authors:  Neda Mohsenpour; Hassan Roknizadeh; Mehdi Maghbooli; Majid Changi-Ashtiani; Mohammad Shahrooei; Mansoor Salehi; Mahdiyeh Behnam; Tina Shahani; Alireza Biglari
Journal:  Int J Mol Cell Med       Date:  2019

8.  Bioinformatics classification of mutations in patients with Mucopolysaccharidosis IIIA.

Authors:  Himani Tanwar; D Thirumal Kumar; C George Priya Doss; Hatem Zayed
Journal:  Metab Brain Dis       Date:  2019-08-05       Impact factor: 3.584

9.  Prediction of Functional Consequences of Missense Mutations in ANO4 Gene.

Authors:  Nadine Reichhart; Vladimir M Milenkovic; Christian H Wetzel; Olaf Strauß
Journal:  Int J Mol Sci       Date:  2021-03-08       Impact factor: 5.923

  9 in total

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