Literature DB >> 29110030

The emerging roles for the chromatin structure regulators CTCF and cohesin in neurodevelopment and behavior.

Liron Davis1, Itay Onn2, Evan Elliott3.   

Abstract

Recent genetic and technological advances have determined a role for chromatin structure in neurodevelopment. In particular, compounding evidence has established roles for CTCF and cohesin, two elements that are central in the establishment of chromatin structure, in proper neurodevelopment and in regulation of behavior. Genetic aberrations in CTCF, and in subunits of the cohesin complex, have been associated with neurodevelopmental disorders in human genetic studies, and subsequent animal studies have established definitive, although sometime opposing roles, for these factors in neurodevelopment and behavior. Considering the centrality of these factors in cellular processes in general, the mechanisms through which dysregulation of CTCF and cohesin leads specifically to neurological phenotypes is intriguing, although poorly understood. The connection between CTCF, cohesin, chromatin structure, and behavior is likely to be one of the next frontiers in our understanding of the development of behavior in general, and neurodevelopmental disorders in particular.

Entities:  

Keywords:  Behavior; CTCF; Chromatin structure; Cohesin; Condensin; Intellectual disability; Neurodevelopment; SMC

Mesh:

Substances:

Year:  2017        PMID: 29110030     DOI: 10.1007/s00018-017-2706-7

Source DB:  PubMed          Journal:  Cell Mol Life Sci        ISSN: 1420-682X            Impact factor:   9.261


  67 in total

1.  CTCF-dependent chromatin insulator is linked to epigenetic remodeling.

Authors:  Ko Ishihara; Mitsuo Oshimura; Mitsuyoshi Nakao
Journal:  Mol Cell       Date:  2006-09-01       Impact factor: 17.970

2.  Cohesin and CTCF differentially affect chromatin architecture and gene expression in human cells.

Authors:  Jessica Zuin; Jesse R Dixon; Michael I J A van der Reijden; Zhen Ye; Petros Kolovos; Rutger W W Brouwer; Mariëtte P C van de Corput; Harmen J G van de Werken; Tobias A Knoch; Wilfred F J van IJcken; Frank G Grosveld; Bing Ren; Kerstin S Wendt
Journal:  Proc Natl Acad Sci U S A       Date:  2013-12-13       Impact factor: 11.205

3.  De novo mutations in the genome organizer CTCF cause intellectual disability.

Authors:  Anne Gregor; Martin Oti; Evelyn N Kouwenhoven; Juliane Hoyer; Heinrich Sticht; Arif B Ekici; Susanne Kjaergaard; Anita Rauch; Hendrik G Stunnenberg; Steffen Uebe; Georgia Vasileiou; André Reis; Huiqing Zhou; Christiane Zweier
Journal:  Am J Hum Genet       Date:  2013-06-06       Impact factor: 11.025

4.  CTCF is required for neural development and stochastic expression of clustered Pcdh genes in neurons.

Authors:  Teruyoshi Hirayama; Etsuko Tarusawa; Yumiko Yoshimura; Niels Galjart; Takeshi Yagi
Journal:  Cell Rep       Date:  2012-07-26       Impact factor: 9.423

Review 5.  Genome-wide studies of CCCTC-binding factor (CTCF) and cohesin provide insight into chromatin structure and regulation.

Authors:  Bum-Kyu Lee; Vishwanath R Iyer
Journal:  J Biol Chem       Date:  2012-09-05       Impact factor: 5.157

6.  Loss of maternal CTCF is associated with peri-implantation lethality of Ctcf null embryos.

Authors:  James M Moore; Natalia A Rabaia; Leslie E Smith; Sara Fagerlie; Kay Gurley; Dmitry Loukinov; Christine M Disteche; Steven J Collins; Christopher J Kemp; Victor V Lobanenkov; Galina N Filippova
Journal:  PLoS One       Date:  2012-04-20       Impact factor: 3.240

7.  Nipbl Interacts with Zfp609 and the Integrator Complex to Regulate Cortical Neuron Migration.

Authors:  Debbie L C van den Berg; Roberta Azzarelli; Koji Oishi; Ben Martynoga; Noelia Urbán; Dick H W Dekkers; Jeroen A Demmers; François Guillemot
Journal:  Neuron       Date:  2016-12-29       Impact factor: 17.173

8.  Epigenetic silencing in Friedreich ataxia is associated with depletion of CTCF (CCCTC-binding factor) and antisense transcription.

Authors:  Irene De Biase; Yogesh K Chutake; Paul M Rindler; Sanjay I Bidichandani
Journal:  PLoS One       Date:  2009-11-19       Impact factor: 3.240

9.  Analysis of neonatal brain lacking ATRX or MeCP2 reveals changes in nucleosome density, CTCF binding and chromatin looping.

Authors:  Kristin D Kernohan; Douglas Vernimmen; Gregory B Gloor; Nathalie G Bérubé
Journal:  Nucleic Acids Res       Date:  2014-07-02       Impact factor: 16.971

10.  The methyltransferase SETDB1 regulates a large neuron-specific topological chromatin domain.

Authors:  Yan Jiang; Yong-Hwee Eddie Loh; Prashanth Rajarajan; Teruyoshi Hirayama; Will Liao; Bibi S Kassim; Behnam Javidfar; Brigham J Hartley; Lisa Kleofas; Royce B Park; Benoit Labonte; Seok-Man Ho; Sandhya Chandrasekaran; Catherine Do; Brianna R Ramirez; Cyril J Peter; Julia T C W; Brian M Safaie; Hirofumi Morishita; Panos Roussos; Eric J Nestler; Anne Schaefer; Benjamin Tycko; Kristen J Brennand; Takeshi Yagi; Li Shen; Schahram Akbarian
Journal:  Nat Genet       Date:  2017-07-03       Impact factor: 38.330

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  10 in total

Review 1.  Function and regulation of chromatin insulators in dynamic genome organization.

Authors:  Dahong Chen; Elissa P Lei
Journal:  Curr Opin Cell Biol       Date:  2019-03-12       Impact factor: 8.382

2.  Distinct promoter regions of the oxytocin receptor gene are hypomethylated in Prader-Willi syndrome and in Prader-Willi syndrome associated psychosis.

Authors:  Hannah M Heseding; Kirsten Jahn; Helge Frieling; Maximilian Deest; Christian K Eberlein; Jelte Wieting; Hannah B Maier; Phileas J Proskynitopoulos; Alexander Glahn; Stefan Bleich
Journal:  Transl Psychiatry       Date:  2022-06-10       Impact factor: 7.989

3.  Stella Regulates the Development of Female Germline Stem Cells by Modulating Chromatin Structure and DNA Methylation.

Authors:  Changliang Hou; Xinyan Zhao; Geng G Tian; Ji Wu
Journal:  Int J Biol Sci       Date:  2022-04-18       Impact factor: 10.750

Review 4.  Nuclear Architecture in the Nervous System: Development, Function, and Neurodevelopmental Diseases.

Authors:  Kenji Ito; Takumi Takizawa
Journal:  Front Genet       Date:  2018-08-06       Impact factor: 4.599

Review 5.  Transposable element-derived sequences in vertebrate development.

Authors:  Ema Etchegaray; Magali Naville; Jean-Nicolas Volff; Zofia Haftek-Terreau
Journal:  Mob DNA       Date:  2021-01-06

Review 6.  The emerging role of chromatin remodelers in neurodevelopmental disorders: a developmental perspective.

Authors:  Britt Mossink; Moritz Negwer; Dirk Schubert; Nael Nadif Kasri
Journal:  Cell Mol Life Sci       Date:  2020-12-02       Impact factor: 9.261

7.  Chromatin architecture transitions from zebrafish sperm through early embryogenesis.

Authors:  Candice L Wike; Yixuan Guo; Mengyao Tan; Ryohei Nakamura; Dana Klatt Shaw; Noelia Díaz; Aneasha F Whittaker-Tademy; Neva C Durand; Erez Lieberman Aiden; Juan M Vaquerizas; David Grunwald; Hiroyuki Takeda; Bradley R Cairns
Journal:  Genome Res       Date:  2021-05-18       Impact factor: 9.043

8.  CTCF in parvalbumin-expressing neurons regulates motor, anxiety and social behavior and neuronal identity.

Authors:  Liron Davis; Prudhvi Raj Rayi; Dmitriy Getselter; Hanoch Kaphzan; Evan Elliott
Journal:  Mol Brain       Date:  2022-04-04       Impact factor: 4.041

Review 9.  A mini-review of the role of condensin in human nervous system diseases.

Authors:  Du Pang; Shengping Yu; Xuejun Yang
Journal:  Front Mol Neurosci       Date:  2022-08-04       Impact factor: 6.261

10.  The conserved DNMT1-dependent methylation regions in human cells are vulnerable to neurotoxicant rotenone exposure.

Authors:  Dana M Freeman; Dan Lou; Yanqiang Li; Suzanne N Martos; Zhibin Wang
Journal:  Epigenetics Chromatin       Date:  2020-03-16       Impact factor: 4.954

  10 in total

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