Literature DB >> 29107014

Circular RNA profiling reveals chi_circ_0008219 function as microRNA sponges in pre-ovulatory ovarian follicles of goats (Capra hircus).

Hu Tao1, Qi Xiong1, Feng Zhang1, Nian Zhang1, Yang Liu1, Xiaojun Suo1, Xiaofeng Li1, Qianping Yang1, Mingxin Chen2.   

Abstract

Circular RNAs (circRNAs) are a new class of non-coding RNAs in animals and are a novel target of non-coding RNA (ncRNA) regulation. The mechanism and function of circRNAs have been reported in some species and tissues. However, there is little available information on the functions of circRNAs in the goat reproductive system. In the present study, we deeply sequenced and analyzed circRNAs through bioinformatics to reveal the expression profiles, and predicted 13,950 circRNAs in the pre-ovulatory ovarian follicles of goats for the first time. Thirty-seven circRNAs were differentially expressed in the Boer goat compared with the Macheng black goat. The chi_circ_0008219 was involved in a vast circRNA-miRNA-mRNA co-expression network. Via a luciferase activity assay, chi_circ_0008219 is observed to sponge to 3 ovarian follicle-related miRNAs. These findings demonstrate that circRNAs have potential effects in the ovarian follicles of ewes and may represent a promising new research field in ovarian follicular development.
Copyright © 2017. Published by Elsevier Inc.

Entities:  

Keywords:  CircRNA; Deep sequencing; Goat; Ovarian follicles; miRNA sponges

Year:  2017        PMID: 29107014     DOI: 10.1016/j.ygeno.2017.10.005

Source DB:  PubMed          Journal:  Genomics        ISSN: 0888-7543            Impact factor:   5.736


  14 in total

1.  Identification and characterization of human ovary-derived circular RNAs and their potential roles in ovarian aging.

Authors:  Hongcai Cai; Yamin Li; Huimin Li; Jean Damascene Niringiyumukiza; Mengdi Zhang; Li Chen; Gang Chen; Wenpei Xiang
Journal:  Aging (Albany NY)       Date:  2018-09-23       Impact factor: 5.682

2.  Characteristics of Circular RNA Expression Profiles of Porcine Granulosa Cells in Healthy and Atretic Antral Follicles.

Authors:  Li Meng; Katja Teerds; Jian Tao; Hengxi Wei; Marcel Jaklofsky; Zhihong Zhao; Yaodi Liang; Li Li; Chi Chiu Wang; Shouquan Zhang
Journal:  Int J Mol Sci       Date:  2020-07-23       Impact factor: 5.923

3.  Genome-wide analysis of circular RNAs in goat skin fibroblast cells in response to Orf virus infection.

Authors:  Feng Pang; Mengmeng Zhang; Xiaojian Yang; Guohua Li; Shu Zhu; Xin Nie; Ruiyong Cao; Xiaohong Yang; Zhenxing Zhang; Haifeng Huang; Baobao Li; Chengqiang Wang; Li Du; Fengyang Wang
Journal:  PeerJ       Date:  2019-01-22       Impact factor: 2.984

4.  Circular RNA profiling in the oocyte and cumulus cells reveals that circARMC4 is essential for porcine oocyte maturation.

Authors:  Zubing Cao; Di Gao; Tengteng Xu; Ling Zhang; Xu Tong; Dandan Zhang; Yiqing Wang; Wei Ning; Xin Qi; Yangyang Ma; Kaiyuan Ji; Tong Yu; Yunsheng Li; Yunhai Zhang
Journal:  Aging (Albany NY)       Date:  2019-09-28       Impact factor: 5.682

Review 5.  Circular RNAs in gynecological disease: promising biomarkers and diagnostic targets.

Authors:  Jie Huang; Qin Zhou; Yunyun Li
Journal:  Biosci Rep       Date:  2019-05-17       Impact factor: 3.840

6.  circSLC41A1 Resists Porcine Granulosa Cell Apoptosis and Follicular Atresia by Promoting SRSF1 through miR-9820-5p Sponging.

Authors:  Huiming Wang; Yi Zhang; Jinbi Zhang; Xing Du; Qifa Li; Zengxiang Pan
Journal:  Int J Mol Sci       Date:  2022-01-28       Impact factor: 5.923

7.  Differential Expression and Functional Analysis of CircRNA in the Ovaries of Low and High Fecundity Hanper Sheep.

Authors:  Aiju Liu; Xiaoyong Chen; Menghe Liu; Limeng Zhang; Xiaofei Ma; Shujun Tian
Journal:  Animals (Basel)       Date:  2021-06-23       Impact factor: 2.752

8.  Dynamic expression and functional analysis of circRNA in granulosa cells during follicular development in chicken.

Authors:  Manman Shen; Tingting Li; Genxi Zhang; Pengfei Wu; Fuxiang Chen; Qiuhong Lou; Lan Chen; Xuemei Yin; Tao Zhang; Jinyu Wang
Journal:  BMC Genomics       Date:  2019-01-30       Impact factor: 3.969

9.  Identification of circular RNAs in the ovarian follicles of Meishan and Duroc sows during the follicular phase.

Authors:  Su Xie; Mengxun Li; Yansen Chen; Yi Liu; Lipeng Ma; Xiaomei Sun; Yishan Sun; Ruonan Gao; Tao Huang
Journal:  J Ovarian Res       Date:  2020-09-11       Impact factor: 4.234

10.  Characterization of XR_311113.2 as a MicroRNA Sponge for Pre-ovulatory Ovarian Follicles of Goats via Long Noncoding RNA Profile and Bioinformatics Analysis.

Authors:  Hu Tao; Juan Yang; Pengpeng Zhang; Nian Zhang; Xiaojun Suo; Xiaofeng Li; Yang Liu; Mingxin Chen
Journal:  Front Genet       Date:  2022-01-03       Impact factor: 4.599

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