| Literature DB >> 29099855 |
Hyungjin Kim1, Chang Min Park1,2,3, Bhumsuk Keam3,4, Sang Joon Park1,3, Miso Kim4, Tae Min Kim3,4, Dong-Wan Kim3,4, Dae Seog Heo3,4, Jin Mo Goo1,2,3.
Abstract
PURPOSE: To determine if the radiomic features on CT can predict progression-free survival (PFS) in epidermal growth factor receptor (EGFR) mutant adenocarcinoma patients treated with first-line EGFR tyrosine kinase inhibitors (TKIs) and to identify the incremental value of radiomic features over conventional clinical factors in PFS prediction.Entities:
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Year: 2017 PMID: 29099855 PMCID: PMC5669442 DOI: 10.1371/journal.pone.0187500
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Fig 1Flow chart of patient selection including inclusion, and exclusion, criteria.
Patient characteristics, clinical factors, and TKI treatment.
| Characteristics | Category | Value |
|---|---|---|
| Median age (year) | 61 (38–85) | |
| Sex | Male | 23 (47.9) |
| Female | 25 (52.1) | |
| Stage | IIIB | 2 (4.2) |
| IV | 46 (95.8) | |
| Smoking status | Current or ex-smoker | 22 (45.8) |
| Never smoker | 26 (54.2) | |
| ECOG PS | 0 | 1 (2.1) |
| 1 | 33 (68.8) | |
| 2 | 2 (4.2) | |
| Extrathoracic metastasis | Absent | 17 (35.4) |
| Present | 31 (64.6) | |
| Tumor diameter at baseline (mm) | 30.5 (10.0–78.2) | |
| Tumor diameter at first follow-up (mm) | 22.4 (6.2–64.6) | |
| Sensitizing | Exon 18 G719 | 1 (2.1) |
| Exon 19 deletion | 18 (37.5) | |
| Exon 21 L858R | 29 (60.4) | |
| EGFR TKI | Gefitinib | 46 (95.8) |
| Erlotinib | 2 (4.2) | |
| Treatment response at first follow-up | Responder | 25 (52.1) |
| Non-responder | 23 (47.9) | |
| Progression-free survival (month) | 9.7 (5.0–13.8) |
Note: Unless otherwise specified, data are numbers of patients (with percentages in parentheses).
aData were not available in 12 patients.
bData are median (with range of data in parentheses).
cData are median (with interquartile range in parentheses).
ECOG PS, Eastern Cooperative Oncology Group Performance Status Score; EGFR, epidermal growth factor receptor; TKI, tyrosine kinase inhibitors
Extracted radiomic features.
| Group | Feature | No. |
|---|---|---|
| First-order statistics | mean, standard deviation, variance, skewness, kurtosis, entropy, homogeneity, energy, C5, C10, C25, C50, C75, C90, C95 | 15 |
| Size and shape | volume, effective diameter, surface area, sphericity, discrete compactness, shape compactness 1, shape compactness 2, roundness | 8 |
| GLCM | moments, angular second moment, inverse difference moment, contrast, entropy | 5 |
| GLRL | Grey-level nonuniformity | 1 |
| Wavelet transformation | decompositions of grey-level nonuniformity | 8 |
C5, C10, …, C95, percentile value of the cumulative histogram; GLCM, gray-level co-occurrence matrix; GLRL, gray-level run-length matrix
Univariate Cox regression analysis of 19 radiomic features.
| Feature | Hazard ratio | Confidence interval | P-value | |
|---|---|---|---|---|
| Lower | Upper | |||
| Discrete compactness_FU | 4.13 | 2.13 | 7.99 | 0.001 |
| Roundness_FU | 5.51 | 2.48 | 12.25 | 0.001 |
| GLN_FU | 4.23 | 2.19 | 8.18 | 0.001 |
| GLCM contrast_FU | 0.27 | 0.14 | 0.52 | 0.001 |
| C75_FU | 3.9 | 1.98 | 7.69 | 0.001 |
| Compactness1 | 3.86 | 1.93 | 7.72 | 0.002 |
| Compantness1_FU | 3.57 | 1.85 | 6.87 | 0.002 |
| Volume | 3.85 | 1.91 | 7.77 | 0.002 |
| LLL_FU | 3.27 | 1.7 | 6.29 | 0.003 |
| LLL | 3.93 | 1.82 | 8.5 | 0.004 |
| Energy_FU | 3.1 | 1.62 | 5.94 | 0.005 |
| GLCM ASM | 0.31 | 0.16 | 0.62 | 0.006 |
| GLN | 3.37 | 1.64 | 6.94 | 0.006 |
| Discrete compactness | 2.79 | 1.51 | 5.17 | 0.006 |
| GLCM contrast | 0.32 | 0.16 | 0.64 | 0.006 |
| C10_FU | 2.89 | 1.52 | 5.5 | 0.006 |
| GLCM entropy | 3.12 | 1.55 | 6.25 | 0.006 |
| GLCM entropy_FU | 2.85 | 1.5 | 5.41 | 0.006 |
| C95_FU | 3.51 | 1.6 | 7.68 | 0.007 |
Note: Features with underbar and ‘FU’ denote that those are extracted from the first follow-up CT.
ASM, angular second moment; C10, tenth percentile at cumulative histogram; C75, seventy-fifth percentile at cumulative histogram; C95, ninety-fifth percentile at cumulative histogram; GLN, grey-level nonuniformity; GLCM, gray-level co-occurrence matrix; LLL, wavelet decomposition of grey-level nonuniformity with directional filtering with low-pass filter along x-, y- and z-direction
Fig 2Graphs of Kaplan-Meier risk groups based on the optimal cutoff of the four radiomic features.
(A) discrete compactness (cutoff: 0.0487), (B) roundness (cutoff: 0.7817), (C) grey-level nonuniformity (cutoff: 31.93), and (D) GLCM contrast (cutoff: 6066). GLCM, gray-level co-occurrence matrix.
Fig 3Radiomic features and their association with progression-free survival (PFS).
(A) On the baseline CT, roundness of the tumor was 0.7352 and grey-level nonuniformity was 23.06. (B) On the first follow-up CT (9 weeks later), roundness was 0.7355 (percent change: 0.0422%) and grey-level nonuniformity decreased to 16.93 (percent change: -26.57%). PFS in this patient was 23.6 months. (C) For this patient, whose PFS was only 1.4 months, tumor roundness was 0.8591 and grey-level nonuniformity was 24.13 on the baseline CT. (D) On the first follow-up CT (9 weeks later), grey-level nonuniformity increased to 43.11 (percent change: 78.63%), while the roundness was 0.8040 (percent change: -6.411%).
Fig 4Kaplan-Meier plots demonstrating the performance of each estimation model.
Patients were divided in to low- and high-probability groups for progression-free survival according to the median value of output from (A) the radiomic model (HR: 5.34, 95% CI: 2.42, 11.76; P<0.001, (B) the clinical-factor model (HR: 2.51, 95% CI: 1.37, 4.59; P = 0.003), and (C) the combined model (HR: 5.49, 95% CI: 2.77, 10.89; P<0.001). CI, confidence interval; HR, hazard ratio.