| Literature DB >> 29084169 |
Tomas Poblete1, Samuel Ortega-Farías2,3, Miguel Angel Moreno4, Matthew Bardeen5,6.
Abstract
Water stress, which affects yield and wine quality, is often evaluated using the midday stem water potential (Ψstem). However, this measurement is acquired on a per plant basis and does not account for the assessment of vine water status spatial variability. The use of multispectral cameras mounted on unmanned aerial vehicle (UAV) is capable to capture the variability of vine water stress in a whole field scenario. It has been reported that conventional multispectral indices (CMI) that use information between 500-800 nm, do not accurately predict plant water status since they are not sensitive to water content. The objective of this study was to develop artificial neural network (ANN) models derived from multispectral images to predict the Ψstem spatial variability of a drip-irrigated Carménère vineyard in Talca, Maule Region, Chile. The coefficient of determination (R²) obtained between ANN outputs and ground-truth measurements of Ψstem were between 0.56-0.87, with the best performance observed for the model that included the bands 550, 570, 670, 700 and 800 nm. Validation analysis indicated that the ANN model could estimate Ψstem with a mean absolute error (MAE) of 0.1 MPa, root mean square error (RMSE) of 0.12 MPa, and relative error (RE) of -9.1%. For the validation of the CMI, the MAE, RMSE and RE values were between 0.26-0.27 MPa, 0.32-0.34 MPa and -24.2-25.6%, respectively.Entities:
Keywords: UAV; artificial neural network; midday stem water potential; multispectral image processing
Year: 2017 PMID: 29084169 PMCID: PMC5713508 DOI: 10.3390/s17112488
Source DB: PubMed Journal: Sensors (Basel) ISSN: 1424-8220 Impact factor: 3.576
Conventional spectral indices used to estimate vine water status of different cultivars of vitis vinifera.
| Index | Formula | R2 | Reference | Cultivars |
|---|---|---|---|---|
| GI | 0.54 | [ | ||
| GNDVI | 0.58 | [ | ||
| MCARI | 0.01 | [ | ||
| MCARI1 | 0.21 | [ | ||
| MCARI2 | <0.01 | [ | ||
| MSAVI | 0.11 | [ | ||
| MSR | 0.66 | [ | ||
| MTVI3 | 0.01 | [ | ||
| NDVI | 0.68 | [ | ||
| TCARI/OSAVI | 0.58 | [ | ||
| SRI | 0.64 | [ | ||
| PRI | 0.25 | [ | ||
| RDVI | 0.10 | [ |
GI = Green Index, GNVDI = Green Normalized Difference Vegetation Index, MCARI = Modified Chlorophyll Absorption in Reflectance Index, MSAVI = Improved SAVI Index, MSR = Modified Simple Ratio, MTVI3 = Modified Triangular Vegetation Index, NDVI = Normalized Difference Vegetation Index, TCARI/OSAVI = Transformed Chlorophyll Absorption in Reflectance index/Optimized Soil-adjusted Vegetation Index, SRI = Simple Ratio Index, PRI = Photochemical Reflectance Index, RDVI = Renormalized Difference VI.
Figure 1Treatments (T) and Repetitions (R) field distribution.
Air temperature (Ta), relative humidity (RH), wind speed (u) and phenological stage (PS) at the time of unmanned aerial vehicle (UAV) overpass during the 2014–2015 growing season.
| Date | Flight Time (hh:mm) | Ta (°C) | RH (%) | u (Km/h) | PS |
|---|---|---|---|---|---|
| 04/03/2014 | 13:00 | 21.3 | 52.5 | 5 | Ripening |
| 13/03/2014 | 12:30 | 21.6 | 54.3 | 3.5 | Ripening |
| 19/03/2014 | 12:45 | 21.3 | 51.4 | 3.5 | Berry development |
| 14/01/2015 | 12:30 | 25.2 | 49.7 | 6.8 | Berry development |
| 27/01/2015 | 12:30 | 24.4 | 41.2 | 7.4 | Berry development |
Figure 2NDVI (Normalized Difference Vegetation Index) values distribution for soil-canopy pixels distinction. (A) NDVI frequency graph; (B) NDVI-ranged frequencies graph. Red line shows the NDVI threshold to separate canopy from soil.
Figure 3Examples of soil–canopy pixel distinction by the mask application based on the NDVI threshold for NDVI and artificial neural network model ANN-2. (A) NDVI soil–canopy information; (B) NDVI pure canopy; (C) ANN-2 soil–canopy information; (D) ANN-2 pure canopy.
Linear correlations between multispectral indices and midday stem water potential (Ψstem).
| Index | a | b | R2 |
|---|---|---|---|
| NDVI * | −4.70 | 6.19 | 0.35 |
| GNDVI * | −203.36 | −140.75 | 0.31 |
| PRI | −1.32 | 1.44 | 0.09 |
| TCARI-OSAVI | −0.92 | −0.74 | 0.09 |
| GI | −2.03 | 1.40 | 0.06 |
| MCARI | −1.27 | −0.60 | 0.02 |
| MCARI1 | −1.22 | −0.33 | 0.03 |
| MCARI2 | −1.43 | 0.03 | <0.01 |
| MSAVI | −1.31 | −0.28 | 0.00 |
| MSR * | 10.78 | 8.45 | 0.34 |
| MTVI3 | −1.22 | −0.33 | 0.03 |
| SRI | −2.01 | 0.23 | 0.06 |
| RDVI | −1.28 | −0.35 | 0.00 |
* p < 0.05, a = intercept, b = slope.
Values of coefficient of determination (R2) for the artificial neural network (ANN) model training.
| ANN Model | Bands | R2 |
|---|---|---|
| ANN-1 ** | R530, R550, R570, R670, R700, R800 | 0.87 |
| ANN-2 ** | R550, R570, R670, R700, R800 | 0.87 |
| ANN-3 ** | R530, R570, R670, R700, R800 | 0.84 |
| ANN-4 ** | R530, R550, R670, R700, R800 | 0.78 |
| ANN-5 ** | R530, R550, R570, R700, R800 | 0.78 |
| ANN-6 ** | R530, R550, R570, R670, R800 | 0.68 |
| ANN-7 ** | R530, R550, R570, R670, R700 | 0.56 |
** p < 0.01.
Statistical parameters of validation for conventional indices and artificial neural network (ANN) models.
| Multispectral Index/ANNModel | MAE (MPa) | RMSE (MPa) | RE (%) | d |
|---|---|---|---|---|
| Multispectral indices | ||||
| NDVI * | 0.25 | 0.32 | −24.22 | 0.54 |
| GNDVI * | 0.27 | 0.34 | −25.58 | 0.51 |
| MSR * | 0.26 | 0.33 | −24.57 | 0.53 |
| ANN models | ||||
| ANN-1 ** | 0.1 | 0.12 | −9.21 | 0.82 |
| ANN-2 ** | 0.1 | 0.12 | −9.11 | 0.82 |
| ANN-3 ** | 0.11 | 0.13 | −9.68 | 0.8 |
| ANN-4 ** | 0.12 | 0.15 | −11.55 | 0.78 |
| ANN-5 ** | 0.13 | 0.15 | −11.61 | 0.77 |
| ANN-6 ** | 0.15 | 0.2 | −15.2 | 0.73 |
| ANN-7 ** | 0.19 | 0.22 | −16.5 | 0.66 |
MAE = mean absolute error, RMSE = root mean square error, RE = relative error, d = index of agreement. * p < 0.05, ** p < 0.01.
Figure 4Comparison between estimated and measured values of midday stem water potential (MPa). (A) Normalized difference vegetation index (NDVI); (B) ANN-2 model.
Figure 5Predicted values of stem water potential (Ψstem) for a whole flight. (A) All pure-canopy pixel information within the vineyard; (B) Predicted Ψstem classification within the four treatments.
Figure 6Intra-vineyard spatial variability of predicted midday stem water potential (Ψstem) using an artificial neural network (ANN) model.