| Literature DB >> 29081697 |
Juan C Carril1, Ramón Cacabelos1.
Abstract
INTRODUCTION: The study of variations in genes involved in the different events that trigger the atherogenic process, such as lipid metabolism (modification of LDL-cholesterol), endothelial function and hypertension, immune response (recruitment of macrophages and foam cell formation) and stability of atherosclerotic plaques (thrombosis), established the risk for suffering a vascular disorder. A total of 2455 cases over 50 years of age were genotyped for a panel of 19 SNPs in 15 genes encoding for proteins involved in the atherogenic process. This study shows the relevance of polymorphisms in APOB (odds ratio (OR), 1.17; 95% confidence interval (95% CI), 0.74-1.85), APOC3 (OR, 1.33; 95% CI, 0.82-2.17) and APOE (OR, 1.75; 95% CI, 1.09-2.80), as genetic risk markers for hypercholesterolemia; polymorphisms in ACE (OR, 1.68; 95% CI, 0.32-8.77) and AGT (OR, 1.74; 95% CI, 0.97-3.14) for hypertension; and in APOE*3/*4 (OR, 2.06; 95% CI, 1.70-2.51) and APOE*4/*4 (OR, 3.08; 95% CI, 1.85-5.12) as unambiguous markers of dementia. RESULT: Our results also showed the transversal importance of proinflammatory cytokines in different stages of atherogenesis, with special relevance of IL6 (OR, 1.39; 95% CI, 0.56-3.49) and TNF (OR, 1.40; 95% CI, 0.92-2.15) related to hypercholesterolemia and hypertension. The set of markers involved in this genetic risk panel makes it a powerful tool in the management of patients with different vascular disorders.Entities:
Keywords: Dementia; Genetic risk; Hypercholesterolemia; Hypertension; Inflammation; Thrombosis; Vascular risk
Year: 2017 PMID: 29081697 PMCID: PMC5635647 DOI: 10.2174/1389202918666170426165226
Source DB: PubMed Journal: Curr Genomics ISSN: 1389-2029 Impact factor: 2.236
Fig. (2)APOE haplotype frequencies.
Genetic polymorphisms involved in the present study.
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| rs693 | c.7545C>T; p.Thr2515= | C_7615420_20 | |
| rs5128 | c.*40C>G; S1/S2 | C_8907537_1_ | |
| rs429358 | c.3932T>C; Cys112Arg | C_3084793_20 | |
| rs7412 | c.4070C>T, Cys158Arg | C_904973_10 | |
| rs708272 | c.+279G>A | C_9615318_10 | |
| rs328 | c.1421C>G; p.Ser447Ter | C_901792_1 | |
| rs4332 | c.496-66T>C | C_11942538_20 | |
| rs4762 | c.620C>T; p.hr207Met (T174M) | C_1985480_20 | |
| rs699 | c.803T>C; p.Met268Thr (M235T) | C_1985481_20 | |
| rs1799983 | c.894T>G; p.Asp298Glu | C_3219460_20 | |
| rs1143634 | c.315C>T; p.Phe105= | C_9546517_10 | |
| rs1800795 | c.-274C>G; G-174C | C_1839697_20 | |
| rs1800796 | c.-636G>C; G-573C | C_11326893_10 | |
| rs2228145 | c.1073A>C; p.Asp358Ala | IL6R_1510 | |
| rs1800629 | c.-488G>A; G-308A | C_7514879_10 | |
| rs1799963 | c.*97G>A | C_8726802_20 | |
| rs6025 | c.1601G>A; p.Arg534Gln | C_11975250_10 | |
| rs1801133 | c.665C>T; p.Ala222Val (C677T) | C_1202883_20 | |
| rs1801131 | c.1286A>C; p.Glu429Ala (A1298C) | C_850486_20 |
Demographic and clinical characteristics.
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| 905 | 1551 | 1311 | 1129 | 1077 | 1268 | |
| 66.13 ± 9.68 | 67.95 ± 10.01 | 68.89 ± 9.34 | 65.44 ± 10.22 | 72.30 ± 8.71 | 63.52 ± 8.91 | |
| 35.36 | 49.32 | 45.00 | 43.31 | 34.73 | 52.13 | |
| 28.08 ± 4.47 | 28.12 ± 4.51 | 28.68 ± 4.38 | 27.40 ± 4.52 | 27.85 ± 4.56 | 28.32 ± 4.40 | |
| 140 ± 22 | 139 ± 21 | 155 ± 16 | 122 ± 10 | 141 ± 20 | 139 ± 22 | |
| 81 ± 11 | 79 ± 11 | 85 ± 11 | 74 ± 7 | 79 ± 11 | 80 ± 11 | |
| 267 ± 32 | 195 ± 28 | 223 ± 46 | 220 ± 45 | 221 ± 47 | 222 ± 45 | |
| 183 ± 30 | 120 ± 25 | 144 ± 41 | 142 ± 40 | 143 ± 41 | 144 ± 40 | |
| 59 ± 16 | 53 ± 14 | 54 ± 15 | 55 ± 15 | 55 ± 14 | 55 ± 15 | |
| 23 ± 7 | 23 ± 7 | 23 ± 7 | 23 ± 8 | 17 ± 6 | 28 ± 2 | |
Allelic and genotypic frequencies of polymorphisms related to lipid metabolism.
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| rs693 | c.7545C>T; p.Thr2515= | CC | CT | TT | T | ||||||
| 0.3234 | 0.3075 | 0.4611 | 0.5029 | 0.2156 | 0.1897 | 0.4461 | 0.4411 | n.s. | |||
| 0.2907 | 0.3535 | 0.5208 | 0.4444 | 0.1885 | 0.2020 | 0.4489 | 0.4242 | n.s. | |||
| 0.3510 | 0.2857 | 0.4471 | 0.5286 | 0.2019 | 0.1857 | 0.4255 | 0.4500 | n.s. | |||
| rs5128 | c*40C>G; S1/S2 | CC | CG | GG | G | ||||||
| 0.8623 | 0.8305 | 0.1371 | 0.1523 | 0.0060 | 0.0160 | 0.0719 | 0.0934 | n.s. | |||
| 0.8211 | 0.8737 | 0.1629 | 0.1162 | 0.0160 | 0.0101 | 0.0974 | 0.0682 | n.s. | |||
| 0.8558 | 0.8286 | 0.1442 | 0.1464 | 0.0000 | 0.0250 | 0.0721 | 0.0982 | n.s. | |||
| rs429358 | c.3932T>C; Cys112Arg | TT | TC | CC | C | ||||||
| 0.7099 | 0.7198 | 0.2481 | 0.2576 | 0.0421 | 0.0226 | 0.1661 | 0.1514 | P < 0.01 | |||
| 0.7018 | 0.7340 | 0.2661 | 0.2385 | 0.0321 | 0.0275 | 0.1651 | 0.1467 | n.s. | |||
| 0.6298 | 0.7859 | 0.3256 | 0.1959 | 0.0447 | 0.0182 | 0.2074 | 0.1161 | n.s. | |||
| rs7412 | c.4070C>T. Cys158Arg | CC | CT | TT | T | ||||||
| 0.9446 | 0.8909 | 0.0532 | 0.1052 | 0.0022 | 0.0039 | 0.0288 | 0.0565 | P < 0.01 | |||
| 0.9174 | 0.9043 | 0.0810 | 0.0904 | 0.0015 | 0.0053 | 0.0420 | 0.0505 | n.s. | |||
| 0.9126 | 0.9076 | 0.0847 | 0.0893 | 0.0028 | 0.0032 | 0.0451 | 0.0478 | n.s. | |||
| rs708272 | c.+279G>A | GG | GA | AA | A | ||||||
| 0.3384 | 0.3846 | 0.5101 | 0.4867 | 0.1515 | 0.1287 | 0.4066 | 0.3720 | n.s. | |||
| 0.3775 | 0.3612 | 0.4855 | 0.5079 | 0.1370 | 0.1309 | 0.3798 | 0.3849 | n.s. | |||
| 0.3714 | 0.3696 | 0.4967 | 0.4916 | 0.1319 | 0.1388 | 0.3802 | 0.3846 | n.s. | |||
| rs328 | c.1421C>G; p.Ser447Ter | CC | CG | GG | C | ||||||
| 0.6826 | 0.7579 | 0.2395 | 0.1988 | 0.0778 | 0.0432 | 0.8024 | 0.8573 | n.s. | |||
| 0.7252 | 0.7513 | 0.2109 | 0.2081 | 0.0639 | 0.0406 | 0.8307 | 0.8553 | n.s. | |||
| 0.7308 | 0.7384 | 0.2260 | 0.2007 | 0.0433 | 0.0609 | 0.8387 | 0.9188 | P < 0.05 | |||
n.s.: not significant.
Allelic and genotypic frequencies of polymorphisms related to endothelial function and hypertension.
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| rs4332 | c.496-66T>C | TT | TC | CC | C | ||||||
| 0.4795 | 0.4873 | 0.3099 | 0.3569 | 0.2105 | 0.1558 | 0.3655 | 0.3343 | n.s. | |||
| 0.4780 | 0.4901 | 0.3459 | 0.3416 | 0.1761 | 0.1683 | 0.3491 | 0.3391 | n.s. | |||
| 0.4571 | 0.5053 | 0.3714 | 0.3333 | 0.1714 | 0.1614 | 0.3571 | 0.3281 | n.s. | |||
| rs4762 | c.620C>T; p.hr207Met (T174M) | CC | CT | TT | T | ||||||
| 0.7877 | 0.7463 | 0.1966 | 0.2237 | 0.0157 | 0.0300 | 0.1140 | 0.1418 | P < 0.05 | |||
| 0.7443 | 0.7798 | 0.2248 | 0.2023 | 0.0308 | 0.0179 | 0.1432 | 0.1191 | P < 0.05 | |||
| 0.7627 | 0.7597 | 0.2215 | 0.2114 | 0.0158 | 0.0289 | 0.1266 | 0.1346 | n.s. | |||
| rs699 | c.803T>C; p.Met268Thr (M235T) | TT | TC | CC | C | ||||||
| 0.1769 | 0.1945 | 0.6081 | 0.6111 | 0.2149 | 0.1945 | 0.5190 | 0.5000 | n.s. | |||
| 0.2112 | 0.1602 | 0.5694 | 0.6575 | 0.2194 | 0.1823 | 0.5041 | 0.5111 | n.s. | |||
| 0.1559 | 0.2096 | 0.6271 | 0.5980 | 0.2169 | 0.1924 | 0.5305 | 0.4972 | n.s. | |||
| rs1799983 | c.894T>G; p.Asp298Glu | TT | TG | GG | G | ||||||
| 0.1073 | 0.1444 | 0.4753 | 0.5010 | 0.4174 | 0.3546 | 0.6550 | 0.6051 | n.s. | |||
| 0.1371 | 0.1232 | 0.4872 | 0.4943 | 0.3757 | 0.3825 | 0.6193 | 0.6297 | n.s. | |||
| 0.1424 | 0.1220 | 0.4864 | 0.4927 | 0.3712 | 0.3853 | 0.6144 | 0.6316 | n.s. | |||
n.s.: not significant.
interval (95% CI), 0.96-1.64); and demented patients: APOC3*G (odds ratio (OR), 1.40; 95% confidence interval (95% CI), 0.88-2.23), APOE*4 (odds ratio (OR), 1.99; 95% confidence interval (95% CI), 1.70-2.34), IL6-174*G (odds ratio (OR), 1.11; 95% confidence interval (95% CI), 0.86-1.44), IL6-573*C (odds ratio (OR), 1.12; 95% confidence interval (95% CI), 0.76-1.66), and F5*A (odds ratio (OR), 1.48; 95% confidence interval (95% CI), 0.37-5.95).
Allelic and genotypic frequencies of polymorphisms related to immune response and inflammation.
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| rs1143634 | c.315C>T; p.Phe105= | CC | CT | TT | T | ||||||
| 0.6548 | 0.6290 | 0.3095 | 0.3159 | 0.0357 | 0.0551 | 0.1905 | 0.2130 | n.s. | |||
| 0.6592 | 0.6162 | 0.2894 | 0.3384 | 0.0514 | 0.0455 | 0.1961 | 0.2146 | n.s. | |||
| 0.6377 | 0.6523 | 0.3140 | 0.2975 | 0.0483 | 0.0502 | 0.2053 | 0.1989 | n.s. | |||
| rs1800795 | c.-274C>G; G-174C | CC | CG | GG | G | ||||||
| 0.2143 | 0.1797 | 0.4048 | 0.4899 | 0.3810 | 0.3304 | 0.5833 | 0.5754 | n.s. | |||
| 0.1865 | 0.2020 | 0.4855 | 0.4242 | 0.3280 | 0.3737 | 0.5707 | 0.5859 | n.s. | |||
| 0.2222 | 0.1720 | 0.4348 | 0.4839 | 0.3430 | 0.3441 | 0.5604 | 0.5860 | n.s. | |||
| rs1800796 | c.-636G>C; G-573C | GG | GC | CC | C | ||||||
| 0.7857 | 0.8000 | 0.1667 | 0.1652 | 0.0476 | 0.0348 | 0.1310 | 0.1174 | n.s. | |||
| 0.8264 | 0.7525 | 0.1543 | 0.1818 | 0.0193 | 0.0657 | 0.0965 | 0.1566 | P < 0.01 | |||
| n.s. | |||||||||||
| rs2228145 | c.1073A>C; p.Asp358Ala | AA | AC | CC | C | ||||||
| 0.3810 | 0.3420 | 0.4821 | 0.4870 | 0.1369 | 0.1710 | 0.3780 | 0.4145 | n.s. | |||
| 0.3633 | 0.3434 | 0.4759 | 0.5000 | 0.1608 | 0.1566 | 0.3987 | 0.4066 | n.s. | |||
| 0.3527 | 0.3548 | 0.4734 | 0.4946 | 0.1739 | 0.1505 | 0.4106 | 0.3978 | n.s. | |||
| rs1800629 | c.-488G>A; G-308A | GG | GA | AA | A | ||||||
| 0.6905 | 0.7536 | 0.2798 | 0.2174 | 0.0298 | 0.0290 | 0.1696 | 0.1377 | n.s. | |||
| 0.7170 | 0.7576 | 0.2540 | 0.2172 | 0.0289 | 0.0253 | 0.1559 | 0.1338 | n.s. | |||
| 0.7246 | 0.7312 | 0.2512 | 0.2366 | 0.0242 | 0.0323 | 0.1498 | 0.1505 | n.s. | |||
n.s.: not significant.
(95% CI), 0.94-1.44), AGT174*TT (odds ratio (OR), 1.80; 95% confidence interval (95% CI), 1.00-3.25), IL6-174*CG (odds ratio (OR), 1.24; 95% confidence interval (95% CI), 0.76-2.01), TNF*GA (odds ratio (OR), 1.24; 95% confidence interval (95% CI), 0.81-1.89), TNF*AA (odds ratio (OR), 1.21; 95% confidence interval (95% CI), 0.40-3.68), F5*GA (odds ratio (OR), 1.27; 95% confidence interval (95% CI), 0.31-5.14), and MTHFR677*TT (odds ratio (OR), 1.24; 95% confidence interval (95% CI), 0.85-1.82) (Table 5).
Allelic and genotypic frequencies of polymorphisms related to thrombosis.
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| rs1799963 | c*97G>A | GG | GA | AA | A | ||||||
| 0.9643 | 0.9712 | 0.0357 | 0.0288 | 0.0000 | 0.0000 | 0.0179 | 0.0144 | n.s. | |||
| 0.9744 | 0.9596 | 0.0256 | 0.0404 | 0.0000 | 0.0000 | 0.0128 | 0.0202 | n.s. | |||
| 0.9565 | 0.9751 | 0.0435 | 0.0249 | 0.0000 | 0.0000 | 0.0217 | 0.0125 | n.s. | |||
| rs6025 | c.1601G>A; p.Arg534Gln | GG | GA | AA | A | ||||||
| 0.9762 | 0.9856 | 0.0238 | 0.0144 | 0.0000 | 0.0000 | 0.0119 | 0.0072 | n.s. | |||
| 0.9808 | 0.9848 | 0.0192 | 0.0152 | 0.0000 | 0.0000 | 0.0096 | 0.0076 | n.s. | |||
| 0.9855 | 0.9786 | 0.0145 | 0.0214 | 0.0000 | 0.0000 | 0.0072 | 0.0107 | n.s. | |||
| rs1801133 | c.665C>T; p.Ala222Val | CC | CT | TT | T | ||||||
| 0.3721 | 0.3884 | 0.4677 | 0.4711 | 0.1602 | 0.1405 | 0.3941 | 0.3760 | n.s. | |||
| 0.3885 | 0.3725 | 0.4507 | 0.5034 | 0.1608 | 0.1242 | 0.3862 | 0.3758 | n.s. | |||
| 0.3753 | 0.3967 | 0.4680 | 0.4617 | 0.1567 | 0.1417 | 0.3907 | 0.3725 | n.s. | |||
| rs1801131 | c.1286A>C; p.Glu429Ala | AA | AC | CC | C | ||||||
| 0.4972 | 0.4698 | 0.4181 | 0.4423 | 0.0847 | 0.0879 | 0.2938 | 0.3091 | n.s. | |||
| 0.5152 | 0.4203 | 0.4000 | 0.4928 | 0.0848 | 0.0870 | 0.2848 | 0.3333 | n.s. | |||
| 0.5117 | 0.4392 | 0.3991 | 0.4730 | 0.0892 | 0.0878 | 0.2887 | 0.3243 | n.s. | |||
n.s.: not significant.
low-density lipoproteins, triglycerides, and vascular disorders [33, 34]. Depending on the genetic model assumed, we could identify the relevance of these polymorphisms related to hypercholesterolemia and vascular risk in a different manner. APOB*TT homozygotes (Fig. ), and genotypes including APOC3*G and APOE*4 alleles (Fig. ) showed a moderately increased risk for hypercholesterolemic patients when compared with normolipidemic subjects. The odds ratio calculation assuming the APOE*3/*3 genotype as the no risk genotype (OR = 1) revealed a highly increased risk for APOE*4/*4 (odds ratio (OR), 1.75; 95% confidence interval (95% CI), 1.09-2.80) (Fig. ).