Literature DB >> 29071308

A Text-Mining Framework for Supporting Systematic Reviews.

Dingcheng Li1,2, Zhen Wang1,3, Liwei Wang1, Sunghwan Sohn1, Feichen Shen1, Mohammad Hassan Murad3,4, Hongfang Liu1.   

Abstract

Systematic reviews (SRs) involve the identification, appraisal, and synthesis of all relevant studies for focused questions in a structured reproducible manner. High-quality SRs follow strict procedures and require significant resources and time. We investigated advanced text-mining approaches to reduce the burden associated with abstract screening in SRs and provide high-level information summary. A text-mining SR supporting framework consisting of three self-defined semantics-based ranking metrics was proposed, including keyword relevance, indexed-term relevance and topic relevance. Keyword relevance is based on the user-defined keyword list used in the search strategy. Indexed-term relevance is derived from indexed vocabulary developed by domain experts used for indexing journal articles and books. Topic relevance is defined as the semantic similarity among retrieved abstracts in terms of topics generated by latent Dirichlet allocation, a Bayesian-based model for discovering topics. We tested the proposed framework using three published SRs addressing a variety of topics (Mass Media Interventions, Rectal Cancer and Influenza Vaccine). The results showed that when 91.8%, 85.7%, and 49.3% of the abstract screening labor was saved, the recalls were as high as 100% for the three cases; respectively. Relevant studies identified manually showed strong topic similarity through topic analysis, which supported the inclusion of topic analysis as relevance metric. It was demonstrated that advanced text mining approaches can significantly reduce the abstract screening labor of SRs and provide an informative summary of relevant studies.

Entities:  

Keywords:  Data Mining; Indexed-Term Relevance; Keyword Relevance; Systematic Review; Text Mining; Topic Modeling; Topic Relevance

Year:  2016        PMID: 29071308      PMCID: PMC5653323     

Source DB:  PubMed          Journal:  Am J Inf Manag


  31 in total

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Journal:  BMJ       Date:  1994-09-03

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Journal:  JAMA       Date:  1994-04-13       Impact factor: 56.272

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Authors:  Ding Cheng Li; Terry Thermeau; Christopher Chute; Hongfang Liu
Journal:  AMIA Jt Summits Transl Sci Proc       Date:  2014-04-07

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Authors:  Tanja Bekhuis; Eugene Tseytlin; Kevin J Mitchell; Dina Demner-Fushman
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  4 in total

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3.  Characterizing Artificial Intelligence Applications in Cancer Research: A Latent Dirichlet Allocation Analysis.

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Journal:  JMIR Med Inform       Date:  2019-09-15

4.  Error rates of human reviewers during abstract screening in systematic reviews.

Authors:  Zhen Wang; Tarek Nayfeh; Jennifer Tetzlaff; Peter O'Blenis; Mohammad Hassan Murad
Journal:  PLoS One       Date:  2020-01-14       Impact factor: 3.240

  4 in total

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