Literature DB >> 29059939

Development of semi-automatic procedure for detection and tracking of fiducial markers for orofacial kinematics during natural feeding.

Filiz Bunyak, Naru Shiraishi, Kannappan Palaniappan, Teresa E Lever, Limor Avivi-Arber, Kazutaka Takahashi.   

Abstract

Feeding is a highly complex, essential behavior for survival in all species. Characterization of feeding behaviors has implications in basic science and translational medicine. We have been developing methods to study feeding behaviors using high speed videofluoroscopy (XROMM) in rats while self-feeding radiopaque flavored kibble. The rat is a popular model in translational medicine; however, it has not been studied using this methodology. Towards this goal, we surgically implanted radiopaque fiducial markers into the skull, mandible, and tongue of rats to enable motion tracking. We are developing computer vision tools to extract kinematics and behavioral features from XROMM videos to overcome barriers of current analysis methods. By understanding feeding dynamics, we will gain basic scientific knowledge and translational insights for feeding disorders caused by neurological conditions such as ALS, Parkinson's disease, and stroke.

Entities:  

Mesh:

Year:  2017        PMID: 29059939      PMCID: PMC5787344          DOI: 10.1109/EMBC.2017.8036891

Source DB:  PubMed          Journal:  Conf Proc IEEE Eng Med Biol Soc        ISSN: 1557-170X


  11 in total

1.  Encoding of coordinated reach and grasp trajectories in primary motor cortex.

Authors:  Maryam Saleh; Kazutaka Takahashi; Nicholas G Hatsopoulos
Journal:  J Neurosci       Date:  2012-01-25       Impact factor: 6.167

2.  X-ray reconstruction of moving morphology (XROMM): precision, accuracy and applications in comparative biomechanics research.

Authors:  Elizabeth L Brainerd; David B Baier; Stephen M Gatesy; Tyson L Hedrick; Keith A Metzger; Susannah L Gilbert; Joseph J Crisco
Journal:  J Exp Zool A Ecol Genet Physiol       Date:  2010-06-01

3.  QUANTITATIVE CELL MOTILITY FOR IN VITRO WOUND HEALING USING LEVEL SET-BASED ACTIVE CONTOUR TRACKING.

Authors:  Filiz Bunyak; Kannappan Palaniappan; Sumit K Nath; Tobias I Baskin; Gang Dong
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2006-04-06

4.  Superresolution microscope image reconstruction by spatiotemporal object decomposition and association: application in resolving t-tubule structure in skeletal muscle.

Authors:  Mingzhai Sun; Jiaqing Huang; Filiz Bunyak; Kristyn Gumpper; Gejing De; Matthew Sermersheim; George Liu; Pei-Hui Lin; Kannappan Palaniappan; Jianjie Ma
Journal:  Opt Express       Date:  2014-05-19       Impact factor: 3.894

5.  Encoding of Both Reaching and Grasping Kinematics in Dorsal and Ventral Premotor Cortices.

Authors:  Kazutaka Takahashi; Matthew D Best; Noah Huh; Kevin A Brown; Adil A Tobaa; Nicholas G Hatsopoulos
Journal:  J Neurosci       Date:  2017-01-11       Impact factor: 6.167

6.  Food consistency and bite size as regulators of jaw movement during feeding in the cat.

Authors:  A J Thexton; K M Hiiemae; A W Crompton
Journal:  J Neurophysiol       Date:  1980-09       Impact factor: 2.714

7.  Flexibility in starting posture drives flexibility in kinematic behavior of the kinethmoid-mediated premaxillary protrusion mechanism in a cyprinid fish, Cyprinus carpio.

Authors:  Nicholas J Gidmark; Katie Lynn Staab; Elizabeth L Brainerd; L Patricia Hernandez
Journal:  J Exp Biol       Date:  2012-07-01       Impact factor: 3.312

8.  Semiautomatic marker tracking of tongue positions captured by videofluoroscopy during primate feeding.

Authors:  Matthew D Best; Yuki Nakamura; Nicoletta A Kijak; Mitchell J Allen; Teresa E Lever; Nicholas G Hatsopoulos; Callum F Ross; Kazutaka Takahashi
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2015

9.  Directional reversals enable Myxococcus xanthus cells to produce collective one-dimensional streams during fruiting-body formation.

Authors:  Shashi Thutupalli; Mingzhai Sun; Filiz Bunyak; Kannappan Palaniappan; Joshua W Shaevitz
Journal:  J R Soc Interface       Date:  2015-08-06       Impact factor: 4.118

10.  Development of a novel in vivo corneal fibrosis model in the dog.

Authors:  K M Gronkiewicz; E A Giuliano; K Kuroki; F Bunyak; A Sharma; L B C Teixeira; C W Hamm; R R Mohan
Journal:  Exp Eye Res       Date:  2015-10-09       Impact factor: 3.467

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