Warning: Undefined array key "mm" in /www/wwwroot/www.ai-bt.com/si.php on line 10 Deprecated: trim(): Passing null to parameter #1 ($string) of type string is deprecated in /www/wwwroot/www.ai-bt.com/si.php on line 10 The impact of cellular metabolism on chromatin dynamics and epigenetics.

Literature DB >> 29058720

The impact of cellular metabolism on chromatin dynamics and epigenetics.

Michael A Reid¹, Ziwei Dai¹, Jason W Locasale¹.

Abstract

The substrates used to modify nucleic acids and chromatin are affected by nutrient availability and the activity of metabolic pathways. Thus, cellular metabolism constitutes a fundamental component of chromatin status and thereby of genome regulation. Here we describe the biochemical and genetic principles of how metabolism can influence chromatin biology and epigenetics, discuss the functional roles of this interplay in developmental and cancer biology, and present future directions in this rapidly emerging area.

Entities: Chemical Disease Gene Species

Mesh：

Substances：
Chromatin

Year: 2017 PMID： 29058720 PMCID： PMC5886854 DOI： 10.1038/ncb3629

Source DB: PubMed Journal: Nat Cell Biol ISSN： 1465-7392 Impact factor: 28.824

157 in total

Review 1. Plasticity in the Adult: How Should the Waddington Diagram Be Applied to Regenerating Tissues?

Authors: Jayaraj Rajagopal; Ben Z Stanger
Journal: Dev Cell Date: 2016-01-25 Impact factor: 12.270

Review 2. Chromatin modifications and their function.

Authors: Tony Kouzarides
Journal: Cell Date: 2007-02-23 Impact factor: 41.582

Review 3. Metabolomics: A Primer.

Authors: Xiaojing Liu; Jason W Locasale
Journal: Trends Biochem Sci Date: 2017-02-11 Impact factor: 13.807

4. The oncometabolite 2-hydroxyglutarate inhibits histone lysine demethylases.

Authors: Rasheduzzaman Chowdhury; Kar Kheng Yeoh; Ya-Min Tian; Lars Hillringhaus; Eleanor A Bagg; Nathan R Rose; Ivanhoe K H Leung; Xuan S Li; Esther C Y Woon; Ming Yang; Michael A McDonough; Oliver N King; Ian J Clifton; Robert J Klose; Timothy D W Claridge; Peter J Ratcliffe; Christopher J Schofield; Akane Kawamura
Journal: EMBO Rep Date: 2011-04-01 Impact factor: 8.807

5. The simultaneous measurement of nicotinamide adenine dinucleotide and related compounds by liquid chromatography/electrospray ionization tandem mass spectrometry.

Authors: Kazuo Yamada; Nobumasa Hara; Tomoko Shibata; Harumi Osago; Mikako Tsuchiya
Journal: Anal Biochem Date: 2006-03-09 Impact factor: 3.365

Review 6. Metabolic regulation of stem cell function in tissue homeostasis and organismal ageing.

Authors: Navdeep S Chandel; Heinrich Jasper; Theodore T Ho; Emmanuelle Passegué
Journal: Nat Cell Biol Date: 2016-07-18 Impact factor: 28.824

7. Persistent epigenetic differences associated with prenatal exposure to famine in humans.

Authors: Bastiaan T Heijmans; Elmar W Tobi; Aryeh D Stein; Hein Putter; Gerard J Blauw; Ezra S Susser; P Eline Slagboom; L H Lumey
Journal: Proc Natl Acad Sci U S A Date: 2008-10-27 Impact factor: 11.205

8. Metabolic Competition in the Tumor Microenvironment Is a Driver of Cancer Progression.

Authors: Chih-Hao Chang; Jing Qiu; David O'Sullivan; Michael D Buck; Takuro Noguchi; Jonathan D Curtis; Qiongyu Chen; Mariel Gindin; Matthew M Gubin; Gerritje J W van der Windt; Elena Tonc; Robert D Schreiber; Edward J Pearce; Erika L Pearce
Journal: Cell Date: 2015-08-27 Impact factor: 41.582

9. The metabolite α-ketoglutarate extends lifespan by inhibiting ATP synthase and TOR.

Authors: Randall M Chin; Xudong Fu; Melody Y Pai; Laurent Vergnes; Heejun Hwang; Gang Deng; Simon Diep; Brett Lomenick; Vijaykumar S Meli; Gabriela C Monsalve; Eileen Hu; Stephen A Whelan; Jennifer X Wang; Gwanghyun Jung; Gregory M Solis; Farbod Fazlollahi; Chitrada Kaweeteerawat; Austin Quach; Mahta Nili; Abby S Krall; Hilary A Godwin; Helena R Chang; Kym F Faull; Feng Guo; Meisheng Jiang; Sunia A Trauger; Alan Saghatelian; Daniel Braas; Heather R Christofk; Catherine F Clarke; Michael A Teitell; Michael Petrascheck; Karen Reue; Michael E Jung; Alison R Frand; Jing Huang
Journal: Nature Date: 2014-05-14 Impact factor: 49.962

10. Mll3 and Mll4 Facilitate Enhancer RNA Synthesis and Transcription from Promoters Independently of H3K4 Monomethylation.

Authors: Kristel M Dorighi; Tomek Swigut; Telmo Henriques; Natarajan V Bhanu; Benjamin S Scruggs; Nataliya Nady; Christopher D Still; Benjamin A Garcia; Karen Adelman; Joanna Wysocka
Journal: Mol Cell Date: 2017-05-05 Impact factor: 17.970

159 in total

Review 1. Metabolic Regulation of Tissue Stem Cells.

Authors: Suzanne N Shapira; Heather R Christofk
Journal: Trends Cell Biol Date: 2020-04-28 Impact factor: 20.808

2. Distinct Regulation of Th17 and Th1 Cell Differentiation by Glutaminase-Dependent Metabolism.

Authors: Marc O Johnson; Melissa M Wolf; Matthew Z Madden; Gabriela Andrejeva; Ayaka Sugiura; Diana C Contreras; Damian Maseda; Maria V Liberti; Katelyn Paz; Rigel J Kishton; Matthew E Johnson; Aguirre A de Cubas; Pingsheng Wu; Gongbo Li; Yongliang Zhang; Dawn C Newcomb; Andrew D Wells; Nicholas P Restifo; W Kimryn Rathmell; Jason W Locasale; Marco L Davila; Bruce R Blazar; Jeffrey C Rathmell
Journal: Cell Date: 2018-11-01 Impact factor: 41.582

3. Five months of voluntary wheel running downregulates skeletal muscle LINE-1 gene expression in rats.

Authors: Matthew A Romero; Petey W Mumford; Paul A Roberson; Shelby C Osburn; Hailey A Parry; Andreas N Kavazis; L Bruce Gladden; Tonia S Schwartz; Brent A Baker; Ryan G Toedebusch; Thomas E Childs; Frank W Booth; Michael D Roberts
Journal: Am J Physiol Cell Physiol Date: 2019-10-16 Impact factor: 4.249

Review 4. Mitostemness.

Authors: Elisabet Cuyàs; Sara Verdura; Núria Folguera-Blasco; Cristian Bastidas-Velez; Ángel G Martin; Tomás Alarcón; Javier A Menendez
Journal: Cell Cycle Date: 2018-07-02 Impact factor: 4.534