Literature DB >> 29058212

NAPR: a Cloud-Based Framework for Neuroanatomical Age Prediction.

Heath R Pardoe1, Ruben Kuzniecky2.   

Abstract

The availability of cloud computing services has enabled the widespread adoption of the "software as a service" (SaaS) approach for software distribution, which utilizes network-based access to applications running on centralized servers. In this paper we apply the SaaS approach to neuroimaging-based age prediction. Our system, named "NAPR" (Neuroanatomical Age Prediction using R), provides access to predictive modeling software running on a persistent cloud-based Amazon Web Services (AWS) compute instance. The NAPR framework allows external users to estimate the age of individual subjects using cortical thickness maps derived from their own locally processed T1-weighted whole brain MRI scans. As a demonstration of the NAPR approach, we have developed two age prediction models that were trained using healthy control data from the ABIDE, CoRR, DLBS and NKI Rockland neuroimaging datasets (total N = 2367, age range 6-89 years). The provided age prediction models were trained using (i) relevance vector machines and (ii) Gaussian processes machine learning methods applied to cortical thickness surfaces obtained using Freesurfer v5.3. We believe that this transparent approach to out-of-sample evaluation and comparison of neuroimaging age prediction models will facilitate the development of improved age prediction models and allow for robust evaluation of the clinical utility of these methods.

Entities:  

Keywords:  Age prediction; Cloud computing; Morphometry; Software as a service

Mesh:

Year:  2018        PMID: 29058212     DOI: 10.1007/s12021-017-9346-9

Source DB:  PubMed          Journal:  Neuroinformatics        ISSN: 1539-2791


  35 in total

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Journal:  Schizophr Bull       Date:  2013-10-13       Impact factor: 9.306

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Journal:  Neuroinformatics       Date:  2013-07

4.  Motion and morphometry in clinical and nonclinical populations.

Authors:  Heath R Pardoe; Rebecca Kucharsky Hiess; Ruben Kuzniecky
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6.  Quantification of biological aging in young adults.

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Authors:  James H Cole; Tiina Annus; Liam R Wilson; Ridhaa Remtulla; Young T Hong; Tim D Fryer; Julio Acosta-Cabronero; Arturo Cardenas-Blanco; Robert Smith; David K Menon; Shahid H Zaman; Peter J Nestor; Anthony J Holland
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10.  The autism brain imaging data exchange: towards a large-scale evaluation of the intrinsic brain architecture in autism.

Authors:  A Di Martino; C-G Yan; Q Li; E Denio; F X Castellanos; K Alaerts; J S Anderson; M Assaf; S Y Bookheimer; M Dapretto; B Deen; S Delmonte; I Dinstein; B Ertl-Wagner; D A Fair; L Gallagher; D P Kennedy; C L Keown; C Keysers; J E Lainhart; C Lord; B Luna; V Menon; N J Minshew; C S Monk; S Mueller; R-A Müller; M B Nebel; J T Nigg; K O'Hearn; K A Pelphrey; S J Peltier; J D Rudie; S Sunaert; M Thioux; J M Tyszka; L Q Uddin; J S Verhoeven; N Wenderoth; J L Wiggins; S H Mostofsky; M P Milham
Journal:  Mol Psychiatry       Date:  2013-06-18       Impact factor: 15.992

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  8 in total

1.  Investigating systematic bias in brain age estimation with application to post-traumatic stress disorders.

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2.  NEURO-LEARN: a Solution for Collaborative Pattern Analysis of Neuroimaging Data.

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3.  Prediction of Chronological Age in Healthy Elderly Subjects with Machine Learning from MRI Brain Segmentation and Cortical Parcellation.

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Journal:  Brain Sci       Date:  2022-04-29

4.  Brain-age estimation accuracy is significantly increased using multishell free-water reconstruction.

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5.  Positron Emission Tomography reveals age-associated hypothalamic microglial activation in women.

Authors:  Tracy Butler; Lidia Glodzik; Xiuyuan Hugh Wang; Ke Xi; Yi Li; Hong Pan; Liangdong Zhou; Gloria Chia-Yi Chiang; Simon Morim; Nimmi Wickramasuriya; Emily Tanzi; Thomas Maloney; Patrick Harvey; Xiangling Mao; Qolamreza Ray Razlighi; Henry Rusinek; Dikoma C Shungu; Mony de Leon; Craig S Atwood; P David Mozley
Journal:  Sci Rep       Date:  2022-08-03       Impact factor: 4.996

6.  Biological Brain Age Prediction Using Cortical Thickness Data: A Large Scale Cohort Study.

Authors:  Habtamu M Aycheh; Joon-Kyung Seong; Jeong-Hyeon Shin; Duk L Na; Byungkon Kang; Sang W Seo; Kyung-Ah Sohn
Journal:  Front Aging Neurosci       Date:  2018-08-22       Impact factor: 5.750

7.  Improved prediction of brain age using multimodal neuroimaging data.

Authors:  Xin Niu; Fengqing Zhang; John Kounios; Hualou Liang
Journal:  Hum Brain Mapp       Date:  2019-12-14       Impact factor: 5.038

8.  Patch-wise brain age longitudinal reliability.

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  8 in total

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