Literature DB >> 29057287

Dimension reduction technique using a multilayered descriptor for high-precision classification of ovarian cancer tissue using optical coherence tomography: a feasibility study.

Catherine St-Pierre1,2, Wendy-Julie Madore1,2,3, Etienne De Montigny1,2, Dominique Trudel2,3, Caroline Boudoux1, Nicolas Godbout1, Anne-Marie Mes-Masson2,3, Kurosh Rahimi2,3, Frédéric Leblond1,2.   

Abstract

Optical coherence tomography (OCT) yields microscopic volumetric images representing tissue structures based on the contrast provided by elastic light scattering. Multipatient studies using OCT for detection of tissue abnormalities can lead to large datasets making quantitative and unbiased assessment of classification algorithms performance difficult without the availability of automated analytical schemes. We present a mathematical descriptor reducing the dimensionality of a classifier's input data, while preserving essential volumetric features from reconstructed three-dimensional optical volumes. This descriptor is used as the input of classification algorithms allowing a detailed exploration of the features space leading to optimal and reliable classification models based on support vector machine techniques. Using imaging dataset of paraffin-embedded tissue samples from 38 ovarian cancer patients, we report accuracies for cancer detection [Formula: see text] for binary classification between healthy fallopian tube and ovarian samples containing cancer cells. Furthermore, multiples classes of statistical models are presented demonstrating [Formula: see text] accuracy for the detection of high-grade serous, endometroid, and clear cells cancers. The classification approach reduces the computational complexity and needed resources to achieve highly accurate classification, making it possible to contemplate other applications, including intraoperative surgical guidance, as well as other depth sectioning techniques for fresh tissue imaging.

Entities:  

Keywords:  classification; image analysis; optical coherence tomography; ovarian cancer; pattern recognition

Year:  2017        PMID: 29057287      PMCID: PMC5637229          DOI: 10.1117/1.JMI.4.4.041306

Source DB:  PubMed          Journal:  J Med Imaging (Bellingham)        ISSN: 2329-4302


  33 in total

1.  Heartbeat OCT: in vivo intravascular megahertz-optical coherence tomography.

Authors:  Tianshi Wang; Tom Pfeiffer; Evelyn Regar; Wolfgang Wieser; Heleen van Beusekom; Charles T Lancee; Geert Springeling; Ilona Krabbendam; Antonius F W van der Steen; Robert Huber; Gijs van Soest
Journal:  Biomed Opt Express       Date:  2015-11-23       Impact factor: 3.732

2.  Mitosis detection in breast cancer pathology images by combining handcrafted and convolutional neural network features.

Authors:  Haibo Wang; Angel Cruz-Roa; Ajay Basavanhally; Hannah Gilmore; Natalie Shih; Mike Feldman; John Tomaszewski; Fabio Gonzalez; Anant Madabhushi
Journal:  J Med Imaging (Bellingham)       Date:  2014-10-10

3.  Optical coherence tomography.

Authors:  D Huang; E A Swanson; C P Lin; J S Schuman; W G Stinson; W Chang; M R Hee; T Flotte; K Gregory; C A Puliafito
Journal:  Science       Date:  1991-11-22       Impact factor: 47.728

4.  Low coherence interferometry approach for aiding fine needle aspiration biopsies.

Authors:  Ernest W Chang; Joseph Gardecki; Martha Pitman; Eric J Wilsterman; Ankit Patel; Guillermo J Tearney; Nicusor Iftimia
Journal:  J Biomed Opt       Date:  2014       Impact factor: 3.170

5.  Classification and analysis of human ovarian tissue using full field optical coherence tomography.

Authors:  Sreyankar Nandy; Melinda Sanders; Quing Zhu
Journal:  Biomed Opt Express       Date:  2016-11-17       Impact factor: 3.732

Review 6.  Optical coherence tomography today: speed, contrast, and multimodality.

Authors:  Wolfgang Drexler; Mengyang Liu; Abhishek Kumar; Tschackad Kamali; Angelika Unterhuber; Rainer A Leitgeb
Journal:  J Biomed Opt       Date:  2014       Impact factor: 3.170

7.  Volumetric image classification using homogeneous decomposition and dictionary learning: A study using retinal optical coherence tomography for detecting age-related macular degeneration.

Authors:  Abdulrahman Albarrak; Frans Coenen; Yalin Zheng
Journal:  Comput Med Imaging Graph       Date:  2016-07-26       Impact factor: 4.790

Review 8.  Optical coherence tomography in dermatology.

Authors:  J Olsen; L Themstrup; G B E Jemec
Journal:  G Ital Dermatol Venereol       Date:  2015-07-01       Impact factor: 2.011

9.  Morphologic three-dimensional scanning of fallopian tubes to assist ovarian cancer diagnosis.

Authors:  Wendy-Julie Madore; Etienne De Montigny; Andréanne Deschênes; Fouzi Benboujja; Mikaël Leduc; Anne-Marie Mes-Masson; Diane M Provencher; Kurosh Rahimi; Caroline Boudoux; Nicolas Godbout
Journal:  J Biomed Opt       Date:  2017-07-01       Impact factor: 3.170

10.  Machine-learning classification of non-melanoma skin cancers from image features obtained by optical coherence tomography.

Authors:  Thomas Martini Jørgensen; Andreas Tycho; Mette Mogensen; Peter Bjerring; Gregor B E Jemec
Journal:  Skin Res Technol       Date:  2008-08       Impact factor: 2.365

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  4 in total

1.  Three-dimensional texture analysis of optical coherence tomography images of ovarian tissue.

Authors:  Travis W Sawyer; Swati Chandra; Photini F S Rice; Jennifer W Koevary; Jennifer K Barton
Journal:  Phys Med Biol       Date:  2018-12-04       Impact factor: 3.609

2.  Fluorescence and Multiphoton Imaging for Tissue Characterization of a Model of Postmenopausal Ovarian Cancer.

Authors:  Travis W Sawyer; Jennifer W Koevary; Caitlin C Howard; Olivia J Austin; Photini F S Rice; Gabrielle V Hutchens; Setsuko K Chambers; Denise C Connolly; Jennifer K Barton
Journal:  Lasers Surg Med       Date:  2020-04-20       Impact factor: 4.025

3.  The clinical usefulness of optical coherence tomography during cancer interventions.

Authors:  Labrinus van Manen; Jouke Dijkstra; Claude Boccara; Emilie Benoit; Alexander L Vahrmeijer; Michalina J Gora; J Sven D Mieog
Journal:  J Cancer Res Clin Oncol       Date:  2018-06-20       Impact factor: 4.553

4.  Quantification of multiphoton and fluorescence images of reproductive tissues from a mouse ovarian cancer model shows promise for early disease detection.

Authors:  Travis W Sawyer; Jennifer W Koevary; Faith P S Rice; Caitlin C Howard; Olivia J Austin; Denise C Connolly; Kathy Q Cai; Jennifer K Barton
Journal:  J Biomed Opt       Date:  2019-09       Impact factor: 3.170

  4 in total

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